Pre_GI Gene

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Host: NC_008563 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008563:2909945 Escherichia coli APEC O1, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (serovar O1) is an avian pathogenic strain and causes respiratory, blood, and enteric infections primarily in poultry. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
29091962909948753hypothetical proteinBLASTP
29099452910823879probable inorganic polyphosphateATP-NAD kinaseQuickGO ontologyBLASTP
291090929125701662DNA recombination and repair protein RecNQuickGO ontologyBLASTP
29127192913060342small membrane lipoproteinQuickGO ontologyBLASTP
29134022913878477hypothetical proteinBLASTP
29140102914492483trans-translation proteinQuickGO ontologyBLASTP
29150712915325255hypothetical proteinBLASTP
29156492916437789hypothetical proteinBLASTP
29165252916818294hypothetical proteinBLASTP
29170292917802774hypothetical proteinBLASTP
291879429206081815hypothetical proteinBLASTP
29209952921489495putative tail fiber proteinQuickGO ontologyBLASTP
29214892922091603putative tail fiber assembly proteinQuickGO ontologyBLASTP
29220632922506444hypothetical proteinBLASTP
29232562923840585hypothetical proteinBLASTP
292383129248891059bacteriophage V tail proteinQuickGO ontologyBLASTP
29248762925304429bacteriophage V tail proteinQuickGO ontologyBLASTP
29253012925849549bacteriophage V tail proteinQuickGO ontologyBLASTP
292584929269281080putative tail proteinQuickGO ontologyBLASTP
292692529282951371bacteriophage V tailDNA circulation proteinQuickGO ontologyBLASTP
292831429301491836bacteriophage V tail proteinQuickGO ontologyBLASTP
29301482930441294hypothetical protein