Pre_GI: BLASTP Hits

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Query: NC_011004:4073916:4113713 Rhodopseudomonas palustris TIE-1, complete genome

Start: 4113713, End: 4114720, Length: 1008

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from an iron-rich microbial mat from School Street Marsh in Woods Hole, MA, USA. It grows photoautotrophically with Fe(II), H2, or thiosulfate as the electron donor, photoheterotrophically with a variety of organic carbon sources and chemoheterotrophically in the dark. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017506:1100679:112535911253591126222864Marinobacter adhaerens HP15 chromosome, complete genomeinner-membrane translocator1e-1997.4
NC_016585:1004000:102056910205691021501933Azospirillum lipoferum 4B plasmid AZO_p1, complete sequencebranched-chain amino acid ABC transporter permease2e-1996.7
NC_016147:3023180:304308030430803043940861Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative ABC-transporter2e-1893.2
NC_015458:3077804:309696430969643097884921Pusillimonas sp. T7-7 chromosome, complete genomeinner-membrane translocator8e-1891.3
NC_009437:2579161:262073926207392621650912Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeinner-membrane translocator9e-1891.3
NC_015376:3631392:363391236339123634772861Burkholderia gladioli BSR3 chromosome chromosome 2, completeinner-membrane translocator4e-1789.4
NC_015681:1201926:121237712123771213279903Thermodesulfatator indicus DSM 15286 chromosome, complete genomeurea ABC transporter permease UrtB3e-1789.4
NC_012988:1817000:182309118230911823975885Methylobacterium extorquens DM4, complete genomeABC transporter2e-1687
NC_011757:1553500:155955015595501560434885Methylobacterium chloromethanicum CM4, complete genomeinner-membrane translocator2e-1687
NC_013209:160892:177858177858178784927Acetobacter pasteurianus IFO 3283-01, complete genomeamide-urea transporter permease protein3e-1685.9
NC_017100:160892:177858177858178784927Acetobacter pasteurianus IFO 3283-03, complete genomeamide-urea transporter permease protein3e-1685.9
NC_017108:160892:177858177858178784927Acetobacter pasteurianus IFO 3283-12, complete genomeamide-urea transporter permease protein3e-1685.9
NC_017111:160892:177858177858178784927Acetobacter pasteurianus IFO 3283-32, complete genomeamide-urea transporter permease protein3e-1685.9
NC_017121:160892:177858177858178784927Acetobacter pasteurianus IFO 3283-07, complete genomeamide-urea transporter permease protein3e-1685.9
NC_017125:160892:177858177858178784927Acetobacter pasteurianus IFO 3283-22, complete genomeamide-urea transporter permease protein3e-1685.9
NC_017146:160892:177858177858178784927Acetobacter pasteurianus IFO 3283-26, complete genomeamide-urea transporter permease protein3e-1685.9
NC_017150:160892:177858177858178784927Acetobacter pasteurianus IFO 3283-01-42C, complete genomeamide-urea transporter permease protein3e-1685.9
NC_009720:464078:466677466677467558882Xanthobacter autotrophicus Py2, complete genomeinner-membrane translocator7e-1685.1
NC_020210:2044944:205128420512842052150867Geobacillus sp. GHH01, complete genomeputative leucine ABC transporter ATP-binding protein9e-1684.7
NC_004369:1051013:106199710619971062881885Corynebacterium efficiens YS-314, complete genomeputative ABC transporter permease protein8e-1581.6
NC_008781:1038158:1050993105099310525671575Polaromonas naphthalenivorans CJ2, complete genomeinner-membrane translocator1e-1480.9
NC_015724:129331:148640148640149497858Cupriavidus necator N-1 plasmid BB2p, complete sequenceinner-membrane translocator2e-1480.1
NC_003911:1791878:1825767182576718277221956Silicibacter pomeroyi DSS-3, complete genomebranched-chain amino acid ABC transporter, permease protein2e-1377
NC_009074:2970435:3009836300983630114581623Burkholderia pseudomallei 668 chromosome I, complete sequenceputative amino acid ABC transporter, permease protein2e-1377
NC_019964:2080444:2099693209969321007931101Halovivax ruber XH-70, complete genomebranched-chain amino acid ABC-type transport system, permease component4e-1375.9
NC_014641:20103:356853568536599915Achromobacter xylosoxidans A8 plasmid pA81, complete sequenceinner-membrane translocator 741e-1273.9
NC_009778:1717458:1715896171589617174611566Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-1273.9
NC_015684:1343251:136214213621421362996855Oligotropha carboxidovorans OM5 chromosome, complete genomeABC transporter permease4e-1272.4
NC_008343:2050000:206574320657432066669927Granulibacter bethesdensis CGDNIH1, complete genomeamide-urea transport system permease protein4e-1272.4
NC_020908:5047410:505246350524635053332870Octadecabacter arcticus 238, complete genomeputative high-affinity branched-chain amino acid transport system permease protein5e-1272
NC_008800:3123495:3123495312349531250961602Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,branched chain amino acid ABC transporter permease1e-1170.9
NC_010511:637214:652764652764653654891Methylobacterium sp. 4-46 chromosome, complete genomeinner-membrane translocator1e-1170.9
NC_015224:1641819:1661643166164316631901548Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,branched chain amino acid ABC transporter permease1e-1170.9
NC_018691:761560:7750947750947766111518Alcanivorax dieselolei B5 chromosome, complete genomeBranched-chain amino acid ABC transporter, permease protein1e-1170.9
NC_017506:2993679:3015708301570830173061599Marinobacter adhaerens HP15 chromosome, complete genomeurea ABC transporter permease UrtB2e-1170.5
NC_007953:572926:581940581940582812873Burkholderia xenovorans LB400 chromosome 3, complete sequenceABC branched chain amino acid family transporter, inner membrane subunit7e-1168.6
NC_007953:504939:514928514928515788861Burkholderia xenovorans LB400 chromosome 3, complete sequenceABC branched chain amino acid family transporter, inner membrane subunit7e-1168.6
NC_015563:2656628:265662826566282657548921Delftia sp. Cs1-4 chromosome, complete genomeABC transporter integral membrane protein9e-1168.2
NC_007643:3799425:380498138049813805868888Rhodospirillum rubrum ATCC 11170, complete genomeinner-membrane translocator9e-1168.2
NC_014831:2133060:214088321408832141749867Thermaerobacter marianensis DSM 12885 chromosome, complete genomeamino acid/amide ABC transporter membrane protein 1, HAAT family1e-1067.8
NC_007948:3502843:351583835158383516719882Polaromonas sp. JS666, complete genomeinner-membrane translocator2e-1067.4
NC_010505:4676403:470123147012314702064834Methylobacterium radiotolerans JCM 2831, complete genomeinner-membrane translocator2e-1067
NC_016825:158626:1647071647071662811575Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12urea ABC transporter permease UrtB2e-1067
NC_010551:1462827:147820914782091479147939Burkholderia ambifaria MC40-6 chromosome 1, complete sequenceinner-membrane translocator2e-1066.6
NC_010424:697187:701448701448702332885Candidatus Desulforudis audaxviator MP104C, complete genomeinner-membrane translocator3e-1066.2
NC_012108:3824977:383016438301643831096933Desulfobacterium autotrophicum HRM2, complete genomeABC-type branched-chain amino acid transport system, permease component4e-1065.9
NC_003047:3202125:321880132188013219688888Sinorhizobium meliloti 1021, complete genomePUTATIVE PERMEASE ABC TRANSPORTER PROTEIN6e-1065.5
NC_013422:1732677:173793617379361738862927Halothiobacillus neapolitanus c2, complete genomeurea ABC transporter, permease protein UrtB5e-1065.5
NC_010170:4739925:474503347450334745905873Bordetella petrii, complete genomeputative branched-chain amino acid transport permease9e-1064.7
NC_009434:3434381:345878434587843459671888Pseudomonas stutzeri A1501, complete genomebranched-chain amino acid ABC transporter, permease protein1e-0964.3
NC_015727:1294532:131893313189331319739807Cupriavidus necator N-1 plasmid BB1p, complete sequenceABC transporter permease1e-0964.3
NC_010515:1205258:122021112202111221086876Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceinner-membrane translocator1e-0963.9
NC_011001:302500:313884313884314672789Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative amino acid transporter3e-0963.2
NC_009445:467682:500622500622501605984Bradyrhizobium sp. ORS 278 chromosome, complete genomebranched-chain amino acid ABC transporter permease3e-0963.2
NC_011297:787932:792900792900793781882Dictyoglomus thermophilum H-6-12, complete genomebranched-chain amino acid ABC transporter permease protein3e-0962.8
NC_012997:4621764:4638890463889046405811692Teredinibacter turnerae T7901, complete genomeurea ABC transporter, permease protein UrtB4e-0962.4
NC_010725:3992948:401439040143904015265876Methylobacterium populi BJ001, complete genomeinner-membrane translocator1e-0860.8
NC_008702:4064470:408740240874024088334933Azoarcus sp. BH72, complete genomeABC transporter permease protein2e-0860.5
NC_011060:1898224:193192919319291932798870Pelodictyon phaeoclathratiforme BU-1, complete genomeinner-membrane translocator3e-0859.7
NC_008148:2053467:205727120572712058236966Rubrobacter xylanophilus DSM 9941, complete genomeinner-membrane translocator4e-0859.3
NC_020291:6426704:644397764439776444852876Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeamino acid/amide ABC transporter membrane protein 1, HAAT family5e-0858.9
NC_017249:908500:9434959434959445051011Bradyrhizobium japonicum USDA 6, complete genomeABC transporter permease6e-0858.5
NC_006361:5546232:555635655563565557240885Nocardia farcinica IFM 10152, complete genomeputative branched-chain amino acid transporter8e-0858.2
NC_008752:3217695:322249332224933223446954Acidovorax avenae subsp. citrulli AAC00-1, complete genomeinner-membrane translocator2e-0757
NC_008212:2978786:299322129932212994147927Haloquadratum walsbyi DSM 16790, complete genomeABC-type urea transport system, permease protein I2e-0756.6
NC_011661:961129:963759963759964640882Dictyoglomus turgidum DSM 6724, complete genomeinner-membrane translocator2e-0756.6
NC_017192:1063955:106518710651871066059873Arcobacter sp. L, complete genomebranched-chain amino acid ABC transporter permease component2e-0756.6
NC_009718:579291:583821583821584699879Fervidobacterium nodosum Rt17-B1, complete genomeinner-membrane translocator3e-0756.2
NC_011768:79297:983709837099257888Desulfatibacillum alkenivorans AK-01, complete genomeinner-membrane translocator3e-0756.2
NC_014828:2497462:251340325134032514260858Ethanoligenens harbinense YUAN-3 chromosome, complete genomeinner-membrane translocator3e-0756.2
NC_003454:2080705:209941620994162100342927Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeBranched-chain amino acid transport system permease protein livH3e-0756.2
NC_007908:1108494:115297111529711153855885Rhodoferax ferrireducens T118, complete genomeinner-membrane translocator5e-0755.8
NC_021066:1393750:141023314102331411147915Raoultella ornithinolytica B6, complete genomehigh-affinity branched-chain amino acid ABC transporter membrane protein6e-0755.5
NC_010999:252605:267378267378268256879Lactobacillus casei, complete genomeBranched-chain amino acid ABC transporter, permease protein5e-0755.5
NC_014334:267409:284947284947285825879Lactobacillus casei str. Zhang chromosome, complete genomebranched-chain amino acid ABC transporter permease5e-0755.5
NC_008526:250000:268106268106268984879Lactobacillus casei ATCC 334, complete genomeBranched-chain amino acid ABC-type transport system, permease component5e-0755.5
NC_008786:1507139:152574115257411526613873Verminephrobacter eiseniae EF01-2, complete genomeinner-membrane translocator5e-0755.5
NC_009617:3184924:321745232174523218336885Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeinner-membrane translocator8e-0755.1
NC_012988:4292815:431816243181624319046885Methylobacterium extorquens DM4, complete genomeBranched-chain amino acid ABC transporter permease7e-0755.1
NC_007336:66000:717027170272589888Ralstonia eutropha JMP134 megaplasmid, complete sequenceinner-membrane translocator7e-0755.1
NC_015556:4025559:403508140350814035950870Pseudomonas fulva 12-X chromosome, complete genomeinner-membrane translocator7e-0755.1
NC_015556:819503:832389832389833303915Pseudomonas fulva 12-X chromosome, complete genomeinner-membrane translocator7e-0755.1
NC_003155:7453994:747563974756397476571933Streptomyces avermitilis MA-4680, complete genomebranched-chain amino acid ABC transporter permease protein1e-0654.3
NC_009092:3057319:307552630755263076419894Shewanella loihica PV-4, complete genomeinner-membrane translocator1e-0654.3
NC_005773:694990:699022699022699936915Pseudomonas syringae pv. phaseolicola 1448A, complete genomehigh-affinity branched-chain amino acid ABC transporter, permease protein BraD1e-0654.3
NC_012988:4075429:409700140970014097876876Methylobacterium extorquens DM4, complete genomebranched-chain amino acid ABC transporter permease3e-0653.1
NC_007952:1453000:147894514789451479862918Burkholderia xenovorans LB400 chromosome 2, complete sequenceABC branched chain amino acid family transporter, inner membrane subunit3e-0652.8
NC_014974:1076565:109330510933051094168864Thermus scotoductus SA-01 chromosome, complete genomeinner-membrane translocator3e-0652.8
NC_013199:282901:298351298351299229879Lactobacillus rhamnosus Lc 705, complete genomehigh affinity branched-chain amino acid ABC transporter, permease component4e-0652.4
NC_013198:298000:316318316318317196879Lactobacillus rhamnosus GG, complete genomehigh affinity branched-chain amino acid ABC transporter, permease protein4e-0652.4
NC_016582:9422650:944253094425309443462933Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative branched-chain amino acid ABC transporter permease4e-0652.4
NC_010003:528855:549214549214550095882Petrotoga mobilis SJ95, complete genomeinner-membrane translocator6e-0652
NC_020453:3179346:318067731806773181549873Agromonas oligotrophica S58 DNA, complete genomeputative branched-chain amino acid ABC transporter permease protein6e-0652