Pre_GI Gene

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Host: NC_008148 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008148:2053467 Rubrobacter xylanophilus DSM 9941, complete genome

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
20534672054138672hypothetical proteinBLASTP
205413520545604264-hydroxybenzoyl-CoA thioesteraseQuickGO ontologyBLASTP
20546242055331708ABC transporter relatedQuickGO ontologyBLASTP
20553342056119786ABC transporter relatedQuickGO ontologyBLASTP
205611220572691158inner-membrane translocatorQuickGO ontologyBLASTP
20572712058236966inner-membrane translocatorQuickGO ontologyBLASTP
205844220596981257Extracellular ligand-binding receptorQuickGO ontologyBLASTP
2059938206002184tRNA-LeuQuickGO ontology
20604722060762291hypothetical protein
20613152061569255hypothetical protein
20632692063988720rhodopsinQuickGO ontologyBLASTP
206398120652341254Lycopene beta and epsilon cyclaseQuickGO ontologyBLASTP
20652362066183948hypothetical proteinBLASTP
20662522066506255hypothetical protein
206649620698823387pyruvate carboxylaseQuickGO ontologyBLASTP
20700012070537537Inorganic diphosphataseQuickGO ontologyBLASTP
20705952070918324transcriptional coactivatorpterin dehydrataseQuickGO ontologyBLASTP
20709152071490576nuclease SNase-likeQuickGO ontologyBLASTP