Pre_GI: BLASTP Hits

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Query: NC_011000:3514338:3556622 Burkholderia cenocepacia J2315 chromosome 1, complete sequence

Start: 3556622, End: 3557434, Length: 813

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain is the index strain for transmission among CF patients in the UK. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007510:759905:762827762827763639813Burkholderia sp. 383 chromosome 1, complete sequenceMscS Mechanosensitive ion channel7e-122436
NC_010084:2822295:285397928539792854791813Burkholderia multivorans ATCC 17616 chromosome 1, completeMscS mechanosensitive ion channel2e-119428
NC_008060:306170:311458311458312270813Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceMscS Mechanosensitive ion channel2e-119428
NC_008542:855347:860633860633861445813Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceMscS Mechanosensitive ion channel2e-119428
NC_010508:809974:813030813030813842813Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceMscS Mechanosensitive ion channel2e-119428
NC_015381:766355:769416769416770231816Burkholderia gladioli BSR3 chromosome 1, complete sequenceYggB7e-104376
NC_006350:3329477:336284033628403363712873Burkholderia pseudomallei K96243 chromosome 1, complete sequencehypothetical protein7e-103373
NC_006348:2372945:240630724063072407179873Burkholderia mallei ATCC 23344 chromosome 1, complete sequencemechanosensitive ion channel YggB7e-103373
NC_009080:2123987:215739421573942158221828Burkholderia mallei NCTC 10247 chromosome II, complete sequencetransporter, small conductance mechanosensitive ion channel (MscS) family7e-103373
NC_008785:516500:516579516579517406828Burkholderia mallei SAVP1 chromosome II, complete sequencetransporter, small conductance mechanosensitive ion channel (MscS) family7e-103373
NC_009074:3163362:319677131967713197598828Burkholderia pseudomallei 668 chromosome I, complete sequencetransporter, small conductance mechanosensitive ion channel (MscS) family7e-103373
NC_008836:1072721:110612811061281106955828Burkholderia mallei NCTC 10229 chromosome II, complete sequencemechanosensitive ion channel YggB7e-103373
NC_009076:3179662:321306932130693213896828Burkholderia pseudomallei 1106a chromosome I, complete sequencetransporter, small conductance mechanosensitive ion channel (MscS) family7e-103373
NC_007434:3588081:362148936214893622316828Burkholderia pseudomallei 1710b chromosome I, complete sequenceYggB7e-103373
NC_007951:570500:597074597074597886813Burkholderia xenovorans LB400 chromosome 1, complete sequenceSmall Conductance Mechanosensitive Ion Channel, (MscS) Family6e-86317
NC_017192:497950:510259510259511119861Arcobacter sp. L, complete genomemechanosensitive ion channel2e-26119
NC_016940:3600749:362449536244953625313819Saprospira grandis str. Lewin chromosome, complete genomemechanosensitive ion channel protein MscS2e-25116
NC_012668:83641:108699108699109562864Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein2e-23109
NC_009654:4253431:425706542570654257895831Marinomonas sp. MWYL1, complete genomeMscS mechanosensitive ion channel2e-21102
NC_009092:1305355:132588213258821326706825Shewanella loihica PV-4, complete genomeMscS Mechanosensitive ion channel8e-2097.4
NC_008261:225425:249255249255250070816Clostridium perfringens ATCC 13124, complete genomemechanosensitive ion channel family protein3e-1995.9
NC_003366:255480:279879279879280694816Clostridium perfringens str. 13, complete genomehypothetical protein3e-1995.9
NC_008262:227354:251679251679252494816Clostridium perfringens SM101, complete genomeMechanosensitive ion channel family3e-1995.5
NC_014844:1818939:183836918383691839220852Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomemechanosensitive ion channel protein MscS1e-1894
NC_013316:1:163741637417255882Clostridium difficile R20291, complete genomeputative mechanosensitive ion channel protein2e-1789.7
NC_019942:1211535:123989512398951240713819Aciduliprofundum sp. MAR08-339, complete genomesmall-conductance mechanosensitive channel4e-1789
NC_009089:1:166121661217493882Clostridium difficile 630, complete genomeputative mechanosensitive ion channel protein1e-1687
NC_007005:4857768:487202348720234872853831Pseudomonas syringae pv. syringae B728a, complete genomeMscS Mechanosensitive ion channel2e-1582.8
NC_004578:4940000:495636049563604957190831Pseudomonas syringae pv. tomato str. DC3000, complete genomemechanosensitive ion channel family protein8e-1580.9
NC_020541:3655223:366851336685133669397885Rhodanobacter sp. 2APBS1, complete genomesmall-conductance mechanosensitive channel2e-1376.6
NC_015144:1333179:133443413344341335351918Weeksella virosa DSM 16922 chromosome, complete genomeMscS Mechanosensitive ion channel4e-1375.5
NC_017080:50000:568555685557832978Phycisphaera mikurensis NBRC 102666, complete genomeputative small-conductance mechanosensitive channel1e-1170.1
NC_007298:2947200:295468129546812955511831Dechloromonas aromatica RCB, complete genomeMscS Mechanosensitive ion channel:Conserved TM helix5e-1168.6
NC_014355:243543:243543243543244343801Candidatus Nitrospira defluvii, complete genomesmall-conductance mechanosensitive channel1e-1067
NC_007517:2926792:293255229325522933448897Geobacter metallireducens GS-15, complete genomeMscS Mechanosensitive ion channel2e-1066.2
NC_007498:357484:385326385326386180855Pelobacter carbinolicus DSM 2380, complete genomesmall-conductance mechanosensitive channel6e-1065.1
NC_014658:701020:722479722479723243765Methanothermus fervidus DSM 2088 chromosome, complete genomemscs mechanosensitive ion channel2e-0963.2
NC_015385:2505977:252451125245112525320810Treponema succinifaciens DSM 2489 chromosome, complete genomeMscS Mechanosensitive ion channel4e-0962.4
NC_015556:515641:5295425295425329013360Pseudomonas fulva 12-X chromosome, complete genomeMscS Mechanosensitive ion channel4e-0962
NC_019940:2731105:2734172273417227356771506Thioflavicoccus mobilis 8321 chromosome, complete genomesmall-conductance mechanosensitive channel8e-0961.2
NC_016614:1543333:1545084154508415476602577Vibrio sp. EJY3 chromosome 2, complete sequencepotassium efflux system kefA / Small-conductance mechanosensitive channel2e-0860.1
NC_012724:1781554:1802139180213918045742436Burkholderia glumae BGR1 chromosome 1, complete genomeMscS Mechanosensitive ion channel3e-0858.9
NC_010552:2331486:2331486233148623339302445Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceMscS Mechanosensitive ion channel1e-0757.4
NC_004459:1:77407740102562517Vibrio vulnificus CMCP6 chromosome I, complete sequenceSmall-conductance mechanosensitive channel2e-0756.6
NC_010515:2037825:2057870205787020603142445Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceMscS Mechanosensitive ion channel3e-0755.8
NC_009483:2401209:2417464241746424185431080Geobacter uraniireducens Rf4 chromosome, complete genomemechanosensitive ion channel MscS4e-0755.5
NC_013592:3212834:3213829321382932162372409Dickeya dadantii Ech586, complete genomeMscS Mechanosensitive ion channel4e-0755.5
NC_016745:2280375:2280375228037522815321158Oceanimonas sp. GK1 chromosome, complete genomemechanosensitive ion channel protein MscS1e-0654.3
NC_003911:2042389:2043404204340420458362433Silicibacter pomeroyi DSS-3, complete genomemechanosensitive ion channel family protein9e-0754.3
NC_009428:833701:8347408347408372892550Rhodobacter sphaeroides ATCC 17025 chromosome, complete genomemechanosensitive ion channel MscS8e-0754.3
NC_015846:790374:791877791877792707831Capnocytophaga canimorsus Cc5 chromosome, complete genomehypothetical protein1e-0653.9
NC_012917:3241196:3244755324475532472022448Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeMscS Mechanosensitive ion channel2e-0653.1
NC_014532:1191267:1197911119791112014323522Halomonas elongata DSM 2581, complete genomeK05802 potassium efflux system protein KefA2e-0653.1
NC_013421:1505176:1520963152096315234162454Pectobacterium wasabiae WPP163, complete genomeMscS Mechanosensitive ion channel3e-0652.8
NC_011989:2262881:2262881226288122653582478Agrobacterium vitis S4 chromosome 1, complete sequencepotassium efflux system KEFA3e-0652.4
NC_008800:3330944:3368224336822433715713348Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,potassium efflux protein KefA5e-0652
NC_015519:2739347:274158327415832742446864Tepidanaerobacter sp. Re1 chromosome, complete genomeMscS Mechanosensitive ion channel4e-0652
NC_014471:674500:709666709666710502837Ignisphaera aggregans DSM 17230 chromosome, complete genomeMscS Mechanosensitive ion channel4e-0652
NC_019792:3735654:3757245375724537582791035Natronobacterium gregoryi SP2 chromosome, complete genomesmall-conductance mechanosensitive channel5e-0651.6
NC_007517:2165657:2168648216864821697301083Geobacter metallireducens GS-15, complete genomeMscS Mechanosensitive ion channel6e-0651.6
NC_007802:1991211:1993442199344219958322391Jannaschia sp. CCS1, complete genomeMscS Mechanosensitive ion channel7e-0651.2
NC_017079:2634623:2633241263324126346261386Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomemechanosensitive ion channel family protein9e-0650.8
NC_013173:1305916:1308676130867613100131338Desulfomicrobium baculatum DSM 4028, complete genomeMscS Mechanosensitive ion channel1e-0550.8