Pre_GI Gene

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Host: NC_011989 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011989:2262881 Agrobacterium vitis S4 chromosome 1, complete sequence

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
226288122653582478potassium efflux system KEFAQuickGO ontologyBLASTP
22657822266315534hypothetical proteinBLASTP
22663232266664342hypothetical proteinBLASTP
22669532267891939ABC transporter substrate binding protein heminQuickGO ontologyBLASTP
226788822689731086hemin ABC transporter permeaseQuickGO ontologyBLASTP
22690032269791789ABC transporter nucleotide bindingATPase heminQuickGO ontologyBLASTP
22700082270925918hypothetical proteinBLASTP
227212122735601440hypothetical flagellinQuickGO ontology
227362222755771956hypothetical proteinBLASTP
22761032276972870hypothetical protein
22775912277965375DNA GT-mismatch repair endonucleaseQuickGO ontologyBLASTP
227796222794401479DNA methylaseQuickGO ontologyBLASTP
227950122809851485hypothetical proteinBLASTP
228097822837342757hypothetical proteinBLASTP
22837312284714984hypothetical proteinBLASTP
228471122868102100hypothetical proteinBLASTP
22868072287643837hypothetical proteinBLASTP
228761622903482733hypothetical protein