Pre_GI: BLASTP Hits

Some Help

Query: NC_010524:4644587:4649412 Leptothrix cholodnii SP-6, complete genome

Start: 4649412, End: 4649882, Length: 471

Host Lineage: Leptothrix cholodnii; Leptothrix; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Leptothrix cholodnii SP-6 was isolated from water and flocculent from an artificial iron seep in Ithaca, NY, USA. Leptothrix cholodnii, like other Leptothrix species is an iron- and manganese-oxidizing, sheathed bacterium common in organic rich aquatic environments. Iron oxides and manganese oxides often coat the sheathes of these organisms.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007404:1260500:127072412707241271704981Thiobacillus denitrificans ATCC 25259, complete genomeintegron integrase2e-51200
NC_015422:3836911:384198438419843842982999Alicycliphilus denitrificans K601 chromosome, complete genomeintegron integrase1e-50198
NC_009439:3394174:340112334011233401821699Pseudomonas mendocina ymp, complete genomeintegron integrase8e-46182
NC_010814:2394250:239990423999042400881978Geobacter lovleyi SZ, complete genomeputative transcriptional regulator, TetR family9e-43172
NC_011901:2833317:284509328450932846064972Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeintegron integrase3e-42170
NC_003902:396000:413236413236414219984Xanthomonas campestris pv. campestris str. ATCC 33913, completesite-specific recombinase1e-40165
NC_007086:396723:413830413830414813984Xanthomonas campestris pv. campestris str. 8004, complete genomesite-specific recombinase1e-40165
NC_015410:3701000:370661337066133707578966Pseudomonas mendocina NK-01 chromosome, complete genomeintegron integrase1e-40165
NC_010688:387000:401078401078402061984Xanthomonas campestris pv. campestris, complete genometyrosine recombinase9e-41165
NC_017271:4473000:4478002447800244792551254Xanthomonas campestris pv. raphani 756C chromosome, completesite-specific recombinase8e-41165
NC_017075:1233377:1237498123749812385081011Rubrivivax gelatinosus IL144, complete genomeDNA integrase IntI2e-40164
NC_011586:268927:3115973115973126311035Acinetobacter baumannii AB0057 chromosome, complete genomeIntI1 integrase5e-40163
NC_009349:78000:817558175510125019496Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete5e-40163
NC_009656:5505413:5509888550988855109011014Pseudomonas aeruginosa PA7 chromosome, complete genomeintegrase/recombinase9e-40162
NC_017162:1228723:124612412461241247083960Acinetobacter baumannii 1656-2 chromosome, complete genomeintI6e-40162
NC_010410:3606826:3624500362450036255131014Acinetobacter baumannii AYE, complete genomeIntegrase/recombinase (E2 protein)6e-40162
NC_009651:19909:3834638346393591014Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN5,integrase6e-40162
NC_009140:121107:1249451249451259581014Salmonella enterica enterica sv Newport str. SL254, completeintegrase IntI1 for transposon Tn216e-40162
NC_010611:240839:2496672496672506801014Acinetobacter baumannii ACICU, complete genomeintegrase6e-40162
NC_009838:81913:9546195461964741014Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequenceIntI1 integrase6e-40162
NC_017387:247462:2642942642942653071014Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomeintegrase6e-40162
NC_017387:247462:2749662749662759791014Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomeintegrase6e-40162
NC_016147:151224:155145155145156029885Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative integrase2e-39161
NC_013960:1258000:127242712724271273392966Nitrosococcus halophilus Nc4 chromosome, complete genomeintegron integrase2e-39161
NC_011751:4992500:4993107499310749941201014Escherichia coli UMN026 chromosome, complete genomeIntegrase/recombinase (E2 protein)1e-39161
NC_006856:26438:4469044690457031014Salmonella enterica subsp. enterica serovar Choleraesuis strintegrase1e-39161
NC_009349:78000:9560095600966131014Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completeintegrase/recombinase1e-39161
NC_003384:109036:1210461210461220591014Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmidputative integrase1e-39161
NC_017328:1075535:1111128111112811121411014Shigella flexneri 2002017 chromosome, complete genomeIntegrase/recombinase1e-39161
NC_017171:1331794:1342193134219313432061014Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomeclass I integrase4e-39160
NC_016860:4055117:4072795407279540738081014Salmonella enterica subsp. enterica serovar Typhimurium strIntI19e-39159
NC_014836:2919508:1161011610126231014Desulfurispirillum indicum S5 chromosome, complete genomeintegron integrase9e-39159
NC_010410:3606826:3677546367754636785591014Acinetobacter baumannii AYE, complete genomeIntegrase/recombinase (E2 protein)9e-39159
NC_008340:420126:4264944264944285782085Alkalilimnicola ehrlichei MLHE-1, complete genomeintegron integrase2e-38158
NC_014960:3009500:301046330104633011350888Anaerolinea thermophila UNI-1, complete genomeputative site-specific recombinase7e-37152
NC_020541:4122852:4154790415479041558061017Rhodanobacter sp. 2APBS1, complete genomeintegron integrase7e-37152
NC_008702:4064470:407856640785664079330765Azoarcus sp. BH72, complete genometruncated integrase/recombinase8e-37152
NC_013446:2761000:2784725278472527857261002Comamonas testosteroni CNB-2, complete genometyrosine recombinase XerD7e-36149
NC_014924:2108116:2131128213112821321351008Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeintegron integrase5e-35146
NC_019902:1061432:107026910702691070760492Thioalkalivibrio nitratireducens DSM 14787, complete genomeIntegron integrase IntIPac5e-33139
NC_017079:2634623:266034526603452661334990Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomeputative transposase1e-32138
NC_019940:2834850:2840634284063428416711038Thioflavicoccus mobilis 8321 chromosome, complete genomeintegron integrase7e-31132
NC_007498:1611986:1615835161583516168361002Pelobacter carbinolicus DSM 2380, complete genomesite-specific recombinase XerD5e-30130
NC_010506:5195000:521206952120695213028960Shewanella woodyi ATCC 51908, complete genomeintegron integrase5e-30129
NC_008700:1627401:164375816437581644714957Shewanella amazonensis SB2B, complete genomesite-specific recombinase, phage integrase family8e-30129
NC_020304:968936:9825609825609835791020Desulfocapsa sulfexigens DSM 10523, complete genomeintegron integrase2e-28124
NC_009523:1025556:104250410425041043463960Roseiflexus sp. RS-1 chromosome, complete genomeintegron integrase3e-28123
NC_009665:3984080:400293840029384003897960Shewanella baltica OS185 chromosome, complete genomeintegron integrase1e-27122
NC_008740:3520500:354775235477523548720969Marinobacter aquaeolei VT8, complete genomeintegron integrase2e-27121
NC_012997:1335902:135153613515361352504969Teredinibacter turnerae T7901, complete genomeintegron integrase2e-27121
NC_008700:1994829:199982719998272000741915Shewanella amazonensis SB2B, complete genomesite-specific recombinase, phage integrase family2e-27120
NC_010831:1224000:1228110122811012293361227Chlorobium phaeobacteroides BS1, complete genomeputative transcriptional regulator, TetR family3e-26117
NC_012997:1820734:1824701182470118257681068Teredinibacter turnerae T7901, complete genomeintegron integrase4e-26116
NC_002506:298868:309750309750310712963Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completesite-specific recombinase IntI44e-26116
NC_012580:301500:310949310949311911963Vibrio cholerae M66-2 chromosome II, complete sequencesite-specific recombinase IntI44e-26116
NC_012583:335000:344619344619345581963Vibrio cholerae O395 chromosome chromosome II, complete sequencesite-specific recombinase IntI44e-26116
NC_012667:1045782:104963410496341050596963Vibrio cholerae MJ-1236 chromosome 2, complete genomeintegron integrase IntI44e-26116
NC_016446:26500:361953619537157963Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completesite-specific recombinase IntI44e-26116
NC_016945:300000:309717309717310679963Vibrio cholerae IEC224 chromosome II, complete sequencesite-specific recombinase IntI44e-26116
NC_014366:3653190:3653190365319036541941005Gamma proteobacterium HdN1, complete genomeIntegron integrase9e-26115
NC_002967:1844000:1873287187328718742941008Treponema denticola ATCC 35405, complete genomeDNA integrase2e-24111
NC_007384:4095016:411272841127284113705978Shigella sonnei Ss046, complete genome5e-24110
NC_002939:2697767:2705340270534027067131374Geobacter sulfurreducens PCA, complete genomehypothetical protein/integrase, fusion3e-24110
NC_018868:3036205:3041865304186530428751011Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeintegron integrase3e-24110
NC_009999:38832:545265452655485960Shewanella baltica OS195 plasmid pS19502, complete sequenceintegron integrase9e-24108
NC_010410:3606826:366314536631453663798654Acinetobacter baumannii AYE, complete genomeGroEL/integrase fusion protein9e-24108
NC_010410:3606826:366818236681823668835654Acinetobacter baumannii AYE, complete genomeGroEL/integrase fusion protein9e-24108
NC_008609:2840249:2846104284610428475101407Pelobacter propionicus DSM 2379, complete genomeintegron integrase1e-23108
NC_007517:3151742:3165949316594931672981350Geobacter metallireducens GS-15, complete genomeIntegron integrase1e-23108
NC_011753:2018500:203281220328122033786975Vibrio splendidus LGP32 chromosome 1, complete genomeSite-specific recombinase IntIA1e-23108
NC_019940:3863124:3867414386741438687301317Thioflavicoccus mobilis 8321 chromosome, complete genomeintegron integrase4e-23107
NC_014965:1428902:143421814342181435180963Vibrio vulnificus MO6-24/O chromosome I, complete sequenceintegron integrase IntI43e-23107
NC_017098:1589994:1607364160736416086411278Spirochaeta africana DSM 8902 chromosome, complete genomeintegron integrase3e-22104
NC_008340:2034810:2054591205459120559791389Alkalilimnicola ehrlichei MLHE-1, complete genomeintegron integrase4e-22103
NC_013456:1743046:174416517441651745127963Vibrio sp. Ex25 chromosome 1, complete genomeintegron integrase IntI47e-22102
NC_010814:2758902:2764512276451227658731362Geobacter lovleyi SZ, complete genomeintegron integrase2e-21101
NC_017080:2340880:2346886234688623480491164Phycisphaera mikurensis NBRC 102666, complete genomeputative tyrosine recombinase2e-21101
NC_016613:2139276:215317721531772154079903Vibrio sp. EJY3 chromosome 1, complete sequencesite-specific recombinase IntIA5e-21100
NC_015500:1337180:1342819134281913440151197Treponema brennaborense DSM 12168 chromosome, complete genomeintegron integrase4e-21100
NC_018645:3029785:3035676303567630370041329Desulfobacula toluolica Tol2, complete genomeintegrase, integron-type2e-2098.2
NC_014008:354292:3856753856753870211347Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeintegron integrase2e-1994.4
NC_014008:3500000:3515629351562935169601332Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeintegron integrase9e-1785.9
NC_009767:3335021:335532833553283356043716Roseiflexus castenholzii DSM 13941, complete genome2e-1167.8
NC_019902:1681320:169459216945921695449858Thioalkalivibrio nitratireducens DSM 14787, complete genomePhage Integrase5e-1167
NC_007677:71532:7773677736790911356Salinibacter ruber DSM 13855, complete genomeintegrase/recombinase2e-1065.1
NC_011059:2478075:249327424932742493807534Prosthecochloris aestuarii DSM 271, complete genome2e-1064.7
NC_019902:2943719:295802529580252958882858Thioalkalivibrio nitratireducens DSM 14787, complete genomephage integrase family protein2e-1064.7
NC_015164:3727500:3739561373956137406671107Bacteroides salanitronis DSM 18170 chromosome, complete genomeintegrase family protein3e-1063.9
NC_015164:493159:5145225145225156281107Bacteroides salanitronis DSM 18170 chromosome, complete genomeintegrase family protein3e-1063.9
NC_009483:3331500:333322333332233334062840Geobacter uraniireducens Rf4 chromosome, complete genomephage integrase family protein6e-1063.2
NC_008826:13393:276542765427932279Methylibium petroleiphilum PM1 plasmid RPME01, complete sequencehypothetical protein7e-1062.8
NC_015703:5865921:5868888586888858705041617Runella slithyformis DSM 19594 chromosome, complete genomeintegron integrase2e-0962
NC_013720:3925756:3933966393396639350151050Pirellula staleyi DSM 6068, complete genome2e-0961.2
NC_014032:71724:787447874478959216Salinibacter ruber M8 chromosome, complete genomephage-related integrase5e-0960.1
NC_013926:71186:902119021191023813Aciduliprofundum boonei T469 chromosome, complete genomeintegrase family protein7e-0959.7
NC_015914:4248000:425594242559424256781840Cyclobacterium marinum DSM 745 chromosome, complete genome7e-0959.7
NC_015914:4248000:426095742609574261796840Cyclobacterium marinum DSM 745 chromosome, complete genome7e-0959.7
NC_010625:1602191:160771416077141608592879Burkholderia phymatum STM815 plasmid pBPHY01, complete sequenceintegrase family protein3e-0857.4
NC_011894:957897:961765961765962606842Methylobacterium nodulans ORS 2060, complete genome4e-0857.4
NC_015167:1666000:168520416852041686097894Cellulophaga lytica DSM 7489 chromosome, complete genomeintegrase family protein4e-0857
NC_015578:2026741:2031219203121920324061188Treponema primitia ZAS-2 chromosome, complete genomephage integrase family protein4e-0857
NC_010627:233572:233572233572234450879Burkholderia phymatum STM815 plasmid pBPHY02, complete sequenceintegrase family protein8e-0856.2
NC_003228:2010643:203162020316202032504885Bacteroides fragilis NCTC 9343, complete genomeputative tyrosine recombinase9e-0855.8
NC_014933:220146:2444792444792456091131Bacteroides helcogenes P 36-108 chromosome, complete genomeintegrase family protein1e-0755.8
NC_011894:5787990:581216558121655812545381Methylobacterium nodulans ORS 2060, complete genome1e-0755.5
NC_018691:318662:325561325561325812252Alcanivorax dieselolei B5 chromosome, complete genomeIntegrase/recombinase (XerC/CodV family) protein2e-0754.7
NC_013422:1755875:178296117829611783134174Halothiobacillus neapolitanus c2, complete genomeintegron integrase5e-0753.5
NC_011026:1681852:168868616886861689541856Chloroherpeton thalassium ATCC 35110, complete genome7e-0753.1
NC_009767:4819000:482985348298534830121269Roseiflexus castenholzii DSM 13941, complete genome1e-0652
NC_009464:180335:196349196349197185837Uncultured methanogenic archaeon RC-I, complete genomeintegrase4e-0650.4
NC_020291:2291418:231343723134372314300864Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomesite-specific recombinase XerD6e-0650.1
NC_021184:3793285:382424738242473825239993Desulfotomaculum gibsoniae DSM 7213, complete genomesite-specific recombinase XerD6e-0650.1
NC_007626:959684:994461994461995318858Magnetospirillum magneticum AMB-1, complete genomeIntegrase7e-0649.7
NC_016048:308342:328244328244328750507Oscillibacter valericigenes Sjm18-20, complete genomeputative site-specific recombinase7e-0649.7