Pre_GI: BLASTP Hits

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Query: NC_010501:3013103:3015386 Pseudomonas putida W619, complete genome

Start: 3015386, End: 3016009, Length: 624

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002947:3404000:340950534095053409939435Pseudomonas putida KT2440, complete genomeamino acid efflux protein, putative6e-60230
NC_017986:5509569:551436955143695514746378Pseudomonas putida ND6 chromosome, complete genomeamino acid efflux protein8e-60229
NC_007963:3225306:323184032318403232460621Chromohalobacter salexigens DSM 3043, complete genomeLysine exporter protein (LYSE/YGGA)5e-49194
NC_020209:2119845:213418821341882134808621Pseudomonas poae RE*1-1-14, complete genomelysine exporter protein LysE/YggA7e-46183
NC_002947:3404000:341220134122013412821621Pseudomonas putida KT2440, complete genometransporter, LysE family2e-44178
NC_011770:1431740:143280414328041433427624Pseudomonas aeruginosa LESB58, complete genomeputative transporter, LysE family2e-41168
NC_016589:1064575:108779110877911088423633Burkholderia sp. YI23 chromosome 1, complete sequencelysine exporter protein LysE/YggA8e-31133
NC_017986:5509569:551700855170085517472465Pseudomonas putida ND6 chromosome, complete genomeamino acid transporter LysE8e-22103
NC_014541:3927500:394089639408963941504609Ferrimonas balearica DSM 9799 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)2e-1789.4
NC_019673:8734993:874514187451418745716576Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein6e-1787.4
NC_012660:4669500:468801746880174688625609Pseudomonas fluorescens SBW25 chromosome, complete genomeputative amino acid efflux protein3e-1684.7
NC_009456:787322:897184897184897810627Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein7e-1684
NC_012583:361241:366132366132366758627Vibrio cholerae O395 chromosome chromosome II, complete sequenceLysine exporter protein7e-1684
NC_002506:324552:346568346568347194627Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein6e-1684
NC_012667:931390:101452710145271015153627Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein6e-1684
NC_016446:49618:716347163472260627Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein6e-1684
NC_016945:324519:346385346385347011627Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein6e-1684
NC_004603:1464000:146416614641661464825660Vibrio parahaemolyticus RIMD 2210633 chromosome I, completeputative homoserine/homoserine lactone efflux protein3e-1581.6
NC_004459:2443000:255037725503772551036660Vibrio vulnificus CMCP6 chromosome I, complete sequencePutative threonine efflux protein5e-1580.9
NC_015856:3675592:369652336965233697329807Collimonas fungivorans Ter331 chromosome, complete genomeLysE family transporter1e-1479.3
NC_011000:2514897:252979325297932530422630Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative homoserine/homoserine lactone efflux protein3e-1478.2
NC_013194:4034854:403789440378944038520627Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeLysine exporter protein (LYSE/YGGA)3e-1478.2
NC_017078:179848:181927181927182550624Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC1,putative lysine exporter protein4e-1477.8
NC_014217:2172464:218715121871512187774624Starkeya novella DSM 506 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)3e-1375.1
NC_009654:3316458:333297633329763333587612Marinomonas sp. MWYL1, complete genomelysine exporter protein LysE/YggA2e-1272.4
NC_012997:4152938:416375341637534164373621Teredinibacter turnerae T7901, complete genometranslocator protein, LysE family3e-1272
NC_009654:91096:112550112550113167618Marinomonas sp. MWYL1, complete genomelysine exporter protein LysE/YggA5e-1271.2
NC_019940:389979:401378401378401986609Thioflavicoccus mobilis 8321 chromosome, complete genomethreonine efflux protein6e-1270.9
NC_005966:159232:174698174698175324627Acinetobacter sp. ADP1, complete genomehomoserine/homoserine lactone efflux protein7e-1270.5
NC_014532:1481787:150940215094021510139738Halomonas elongata DSM 2581, complete genomelysine exporter protein (LysE/YggA)8e-1270.5
NC_012856:207194:209129209129209770642Ralstonia pickettii 12D chromosome 1, complete genomeLysine exporter protein (LYSE/YGGA)1e-1169.7
NC_012997:4152938:416505841650584165681624Teredinibacter turnerae T7901, complete genometranslocator protein, LysE family1e-1169.7
NC_014166:455378:468772468772469398627Arcobacter nitrofigilis DSM 7299 chromosome, complete genomelysine exporter protein1e-1169.7
NC_015588:2200517:221407022140702214711642Isoptericola variabilis 225 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)1e-1169.7
NC_004547:913553:918802918802919428627Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative amino acid efflux protein2e-1169.3
NC_008095:6323456:634453563445356345170636Myxococcus xanthus DK 1622, complete genomehomoserine/threonine efflux protein3e-1168.2
NC_009092:4585784:459073645907364591377642Shewanella loihica PV-4, complete genomeLysine exporter protein (LYSE/YGGA)7e-1167.4
NC_012559:978419:993730993730994341612Laribacter hongkongensis HLHK9, complete genomeProbable transporter, LysE family protein6e-1167.4
NC_015711:8169752:820575582057558206390636Myxococcus fulvus HW-1 chromosome, complete genomehomoserine/threonine efflux protein6e-1167.4
NC_013173:1305916:131879113187911319402612Desulfomicrobium baculatum DSM 4028, complete genomeLysine exporter protein (LYSE/YGGA)6e-1167.4
NC_010623:1871492:187265918726591873270612Burkholderia phymatum STM815 chromosome 2, complete sequenceLysine exporter protein (LYSE/YGGA)7e-1167
NC_014915:3039639:304072030407203041346627Geobacillus sp. Y412MC52 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)8e-1167
NC_009953:1581088:158628415862841586952669Salinispora arenicola CNS-205 chromosome, complete genomeleucine export protein LeuE1e-1066.2
NC_013947:373862:391337391337391948612Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)2e-1065.9
NC_007005:98488:101677101677102312636Pseudomonas syringae pv. syringae B728a, complete genomeLysine exporter protein (LYSE/YGGA)2e-1065.9
NC_020409:2222000:222251122225112223143633Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeLysine exporter protein (LYSE/YGGA)2e-1065.9
NC_007498:919697:928223928223928849627Pelobacter carbinolicus DSM 2380, complete genomeamino acid efflux/transport protein2e-1065.9
NC_020064:1409596:141547114154711416103633Serratia marcescens FGI94, complete genomeputative threonine efflux protein2e-1065.5
NC_020210:661236:665046665046665687642Geobacillus sp. GHH01, complete genomeamino acid transporter2e-1065.5
NC_018679:2541986:255159925515992552213615Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completelysine exporter protein LysE/YggA3e-1065.5
NC_016109:3963189:398740839874083988070663Kitasatospora setae KM-6054, complete genomeputative LysE family protein3e-1065.1
NC_016593:762216:782155782155782796642Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehomoserine/homoserine lactone efflux transporter (RhtB family)3e-1065.1
NC_015376:1431728:145099114509911451641651Burkholderia gladioli BSR3 chromosome chromosome 2, completelysine exporter protein LysE/YggA4e-1064.7
NC_020210:2969862:297081429708142971440627Geobacillus sp. GHH01, complete genomelysine exporter protein4e-1064.7
NC_010125:2483122:251558025155802516203624Gluconacetobacter diazotrophicus PAl 5, complete genomeLysine exporter protein4e-1064.7
NC_009328:1651812:167643616764361677059624Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeamino acid efflux protein6e-1064.3
NC_019974:3567164:358879035887903589434645Natronococcus occultus SP4, complete genomeputative threonine efflux protein6e-1064.3
NC_012578:1465302:147568814756881476326639Vibrio cholerae M66-2 chromosome I, complete sequencehypothetical protein8e-1063.9
NC_009457:1068000:107666710766671077305639Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein8e-1063.9
NC_002505:1507860:151824615182461518884639Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein1e-0963.2
NC_012668:2115228:212518721251872125825639Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein1e-0963.2
NC_016445:984856:995241995241995879639Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein1e-0963.2
NC_016944:1504888:151527415152741515912639Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein1e-0963.2
NC_016613:1805907:182610618261061826753648Vibrio sp. EJY3 chromosome 1, complete sequenceHomoserine/homoserine lactone efflux protein2e-0962.8
NC_017986:1862408:188286718828671883517651Pseudomonas putida ND6 chromosome, complete genomeefflux protein, LysE family2e-0962.4
NC_009328:2905000:290504229050422905710669Geobacillus thermodenitrificans NG80-2 chromosome, complete genomehomoserine/homoserine lactone efflux protein2e-0962
NC_015690:2553837:256160425616042562179576Paenibacillus mucilaginosus KNP414 chromosome, complete genomelysine exporter protein LysE/YggA3e-0962
NC_014562:1402863:141988914198891420533645Pantoea vagans C9-1 chromosome, complete genomePutative RhtB family transporter3e-0962
NC_004557:2289135:231194223119422312616675Clostridium tetani E88, complete genomehomoserine/homoserine lactone efflux protein4e-0961.6
NC_006510:1731939:174417217441721744792621Geobacillus kaustophilus HTA426, complete genomehypothetical protein4e-0961.6
NC_012997:4152938:416157541615754162186612Teredinibacter turnerae T7901, complete genometranslocator protein, LysE family3e-0961.6
NC_016935:3103430:311113131111313111706576Paenibacillus mucilaginosus 3016 chromosome, complete genomelysine exporter protein LysE/YggA3e-0961.6
NC_007802:1991211:200400820040082004634627Jannaschia sp. CCS1, complete genomeLysine exporter protein (LYSE/YGGA)4e-0961.2
NC_016830:3697173:374224837422483742856609Pseudomonas fluorescens F113 chromosome, complete genomeprotein LysE/YggA5e-0961.2
NC_020210:2969862:297178829717882972420633Geobacillus sp. GHH01, complete genomeputative transporter5e-0960.8
NC_013166:1341575:134576013457601346383624Kangiella koreensis DSM 16069, complete genomeLysine exporter protein (LYSE/YGGA)7e-0960.5
NC_015947:223184:231035231035231670636Burkholderia sp. JV3 chromosome, complete genomelysine exporter protein LysE/YggA8e-0960.5
NC_016602:2037162:204777620477762048414639Vibrio furnissii NCTC 11218 chromosome 1, complete sequencethreonine efflux protein1e-0860.1
NC_006361:3615322:362170736217073622348642Nocardia farcinica IFM 10152, complete genomeputative translocator1e-0859.7
NC_014034:2899120:290351829035182904153636Rhodobacter capsulatus SB1003 chromosome, complete genomeLysE family transporter1e-0859.7
NC_014973:2425994:244300424430042443618615Geobacter sp. M18 chromosome, complete genomelysine exporter protein LysE/YggA2e-0859.3
NC_014550:2835696:285376728537672854390624Arthrobacter arilaitensis Re117, complete genomeRHBT family amino acid transporter2e-0859.3
NC_015856:4975815:497693449769344977557624Collimonas fungivorans Ter331 chromosome, complete genomelysine exporter protein LysE/YggA2e-0859.3
NC_015856:1733500:175648817564881757243756Collimonas fungivorans Ter331 chromosome, complete genomeRhtB family transporter3e-0858.5
NC_010170:1417615:143407414340741434691618Bordetella petrii, complete genomeputative amino acid efflux transmembrane protein3e-0858.5
NC_010170:4739925:475988647598864760716831Bordetella petrii, complete genomehypothetical protein3e-0858.5
NC_013850:3303500:332030333203033320941639Klebsiella variicola At-22 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)3e-0858.5
NC_016514:1142607:115079911507991151443645Enterobacter cloacae EcWSU1 chromosome, complete genomeLeucine efflux protein4e-0858.2
NC_013850:2182337:224120422412042241848645Klebsiella variicola At-22 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)4e-0857.8
NC_014623:7963238:798199979819997982655657Stigmatella aurantiaca DW4/3-1 chromosome, complete genomelysine exporter family protein5e-0857.8
NC_017986:4124335:414734041473404148038699Pseudomonas putida ND6 chromosome, complete genomeamino acid transporter LysE6e-0857.4
NC_014976:759129:760611760611761243633Bacillus subtilis BSn5 chromosome, complete genomeputative efflux transporter7e-0857.4
NC_015434:2527412:255327525532752553871597Verrucosispora maris AB-18-032 chromosome, complete genomelysine exporter protein LysE/YggA9e-0857
NC_012880:1127997:113352811335281134226699Dickeya dadantii Ech703, complete genomeLysine exporter protein (LYSE/YGGA)8e-0857
NC_010322:4623867:462621246262124626829618Pseudomonas putida GB-1 chromosome, complete genomelysine exporter protein LysE/YggA1e-0756.6
NC_008699:56500:796077960780230624Nocardioides sp. JS614, complete genomeLysine exporter protein (LYSE/YGGA)1e-0756.6
NC_020181:1653261:167123416712341671878645Enterobacter aerogenes EA1509E, complete genomePutative transport protein1e-0756.6
NC_014153:2187409:219840521984052199016612Thiomonas intermedia K12 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)1e-0756.6
NC_006270:2172693:219447621944762195099624Bacillus licheniformis ATCC 14580, complete genomeLysine exporter protein2e-0756.2
NC_006322:2173500:219532121953212195944624Bacillus licheniformis ATCC 14580, complete genomehypothetical protein2e-0756.2
NC_014838:218000:220948220948221580633Pantoea sp. At-9b plasmid pPAT9B01, complete sequencelysine exporter protein LysE/YggA2e-0755.8
NC_014640:4031336:403657340365734037202630Achromobacter xylosoxidans A8 chromosome, complete genomelysine transporter LysE3e-0755.5
NC_008752:620802:637048637048637731684Acidovorax avenae subsp. citrulli AAC00-1, complete genomeLysine exporter protein (LYSE/YGGA)2e-0755.5
NC_013194:3861409:386867038686703869302633Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeLysine exporter protein (LYSE/YGGA)3e-0755.1
NC_014532:2298628:229862822986282299227600Halomonas elongata DSM 2581, complete genomehypothetical protein4e-0754.7
NC_009256:3601080:362277336227733623414642Burkholderia vietnamiensis G4 chromosome 1, complete sequencelysine exporter protein LysE/YggA5e-0754.3
NC_009348:47974:532585325853896639Aeromonas salmonicida subsp. salmonicida A449, complete genomeleucine export protein LeuE5e-0754.3
NC_012724:147454:167713167713168339627Burkholderia glumae BGR1 chromosome 1, complete genomehypothetical protein9e-0753.5
NC_015740:4508375:452405345240534524664612Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeamino acid transporter LysE1e-0653.1
NC_020260:2725201:273941027394102740054645Cronobacter sakazakii Sp291, complete genomeleucine export protein LeuE1e-0653.1
NC_014624:1369642:137157213715721372153582Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein1e-0653.1
NC_013850:2357608:237279823727982373451654Klebsiella variicola At-22 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)2e-0652.8
NC_017186:9120711:912610891261089126722615Amycolatopsis mediterranei S699 chromosome, complete genomelysine exporter protein LysE/YggA2e-0652.8
NC_014318:9120651:912604891260489126662615Amycolatopsis mediterranei U32 chromosome, complete genomelysine exporter protein LysE/YggA2e-0652.8
NC_013592:3618248:363092036309203631549630Dickeya dadantii Ech586, complete genomeLysine exporter protein (LYSE/YGGA)3e-0652
NC_003295:856775:858719858719859351633Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSMEMBRANE PROTEIN4e-0651.6
NC_020181:1653261:167280216728021673455654Enterobacter aerogenes EA1509E, complete genomePutative threonine efflux protein4e-0651.6
NC_019842:3921424:392142439214243922128705Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein4e-0651.6
NC_018868:4174794:417564341756434176308666Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomelysine exporter protein LysE/YggA3e-0651.6
NC_013929:3953046:396128039612803961933654Streptomyces scabiei 87.22 chromosome, complete genomeLysE family transporter4e-0651.2
NC_015663:3742738:374713837471383747791654Enterobacter aerogenes KCTC 2190 chromosome, complete genomelysine exporter LysE/YggA5e-0651.2
NC_009901:2272206:227694022769402277560621Shewanella pealeana ATCC 700345, complete genomeLysine exporter protein (LYSE/YGGA)7e-0650.8
NC_014171:2177353:219277321927732193405633Bacillus thuringiensis BMB171 chromosome, complete genomeamino acid transporter LysE8e-0650.4