Pre_GI: BLASTP Hits

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Query: NC_010501:2511887:2524038 Pseudomonas putida W619, complete genome

Start: 2524038, End: 2525918, Length: 1881

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015942:2544407:2566316256631625683522037Acidithiobacillus ferrivorans SS3 chromosome, complete genomeintegrase catalytic subunit6e-56219
NC_012855:39751:6146561465634772013Ralstonia pickettii 12D plasmid pRp12D01, complete sequenceIntegrase catalytic region1e-49197
NC_015572:1:1358813588155761989Methylomonas methanica MC09 chromosome, complete genomeintegrase catalytic subunit8e-42172
NC_014539:1:1839118391203521962Burkholderia sp. CCGE1003 chromosome 1, complete sequenceintegrase catalytic subunit7e-40166
NC_009659:892272:9091379091379110831947Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein8e-38159
NC_015572:1:4276342763446431881Methylomonas methanica MC09 chromosome, complete genomeintegrase catalytic subunit5e-37156
NC_002947:8394:1713317133191662034Pseudomonas putida KT2440, complete genometransposase, putative6e-34146
NC_010501:1:80668066100241959Pseudomonas putida W619, complete genomeIntegrase catalytic region6e-34146
NC_009512:1:80468046100041959Pseudomonas putida F1, complete genomeIntegrase, catalytic region6e-34146
NC_010322:1:88288828107861959Pseudomonas putida GB-1 chromosome, complete genomeintegrase catalytic subunit6e-34146
NC_009659:3384997:3399629339962934014611833Janthinobacterium sp. Marseille chromosome, complete genometransposase4e-34146
NC_008061:190287:2051762051762071641989Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceIntegrase, catalytic region4e-32140
NC_010515:2111691:2128434212843421301611728Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceIntegrase catalytic region4e-32140
NC_007509:3668:2569725697276461950Burkholderia sp. 383 chromosome 3, complete sequencehypothetical protein7e-32139
NC_012440:1215838:1236077123607712379361860Persephonella marina EX-H1, complete genomeTniA transposase3e-28127
NC_014366:3555425:3567950356795035698481899Gamma proteobacterium HdN1, complete genomeIntegrase, catalytic region8e-28125
NC_016616:915755:9399229399229418231902Dechlorosoma suillum PS chromosome, complete genomeintegrase family protein4e-26120
NC_012968:63898:7520175201771921992Methylotenera mobilis JLW8, complete genomeIntegrase catalytic region9e-26119
NC_015161:1748236:1755388175538817573311944Deinococcus proteolyticus MRP chromosome, complete genomehypothetical protein3e-25117
NC_017387:247462:2474622474622493721911Acinetobacter baumannii TCDC-AB0715 chromosome, complete genometransposition protein B9e-25115
NC_009348:1064664:1073012107301210748921881Aeromonas salmonicida subsp. salmonicida A449, complete genomeTniA transposase2e-24114
NC_017162:270460:2739922739922759021911Acinetobacter baumannii 1656-2 chromosome, complete genometransposase2e-24114
NC_010410:3606826:3693499369349936954091911Acinetobacter baumannii AYE, complete genomeputative transposase3e-24114
NC_008782:1277117:1296668129666812983381671Acidovorax sp. JS42, complete genomeIntegrase, catalytic region1e-23112
NC_010002:1879220:1892059189205918940111953Delftia acidovorans SPH-1, complete genomehypothetical protein4e-23110
NC_007575:1663088:1667067166706716689231857Sulfurimonas denitrificans DSM 1251, complete genomeintegrase catalytic subunit6e-23109
NC_003317:1263562:1271799127179912737601962Brucella melitensis 16M chromosome I, complete sequenceTRANSPOSASE6e-22106
NC_017244:726893:7332397332397353532115Brucella melitensis M28 chromosome chromosome 1, complete sequenceintegrase catalytic domain-containing protein1e-21105
NC_017246:727143:7334897334897356032115Brucella melitensis M5-90 chromosome chromosome I, completeintegrase, catalytic domain -containing protein1e-21105
NC_012441:727500:7332317332317353452115Brucella melitensis ATCC 23457 chromosome I, complete sequenceintegrase catalytic domain-containing protein1e-21105
NC_017248:721764:7297577297577318712115Brucella melitensis NI chromosome chromosome I, complete sequenceIntegrase, catalytic domain protein1e-21105
NC_007618:724238:7305517305517326652115Brucella melitensis biovar Abortus 2308 chromosome I, completeIntegrase, catalytic domain1e-21105
NC_006932:727943:7342567342567363702115Brucella abortus biovar 1 str. 9-941 chromosome I, completetransposase, hypothetical1e-21105
NC_015857:731982:7393107393107414242115Brucella pinnipedialis B2/94 chromosome chromosome 1, completeintegrase catalytic subunit1e-21105
NC_004310:706238:7125517125517146652115Brucella suis 1330 chromosome I, complete sequencetransposase, putative1e-21105
NC_010742:726146:7325737325737346872115Brucella abortus S19 chromosome 1, complete sequenceIntegrase, catalytic domain protein1e-21105
NC_010103:704875:7112707112707130061737Brucella canis ATCC 23365 chromosome I, complete sequenceIntegrase, catalytic domain8e-22105
NC_010169:725152:7314657314657335792115Brucella suis ATCC 23445 chromosome I, complete sequenceIntegrase, catalytic domain9e-22105
NC_017251:707000:7125377125377146512115Brucella suis 1330 chromosome I, complete genometransposase1e-21105
NC_016797:706980:7124827124827145962115Brucella suis VBI22 chromosome I, complete sequencetransposase1e-21105
NC_016795:1673464:1681716168171616838302115Brucella abortus A13334 chromosome 1, complete sequencetransposase1e-21105
NC_016778:329288:3403393403393424532115Brucella canis HSK A52141 chromosome 1, complete sequencetransposase1e-21105
NC_013119:707804:7158337158337179472115Brucella microti CCM 4915 chromosome 1, complete sequencetransposase, putative1e-21105
NC_008577:4611431:4638394463839446402471854Shewanella sp. ANA-3 chromosome 1, complete sequenceIntegrase, catalytic region2e-21104
NC_014215:2259290:2281505228150522832051701Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,TniA protein2e-21104
NC_011761:2217632:2229241222924122311211881Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completetransposon transposition protein B5e-21103
NC_010939:405477:4235454235454254731929Actinobacillus pleuropneumoniae serovar 7 str. AP76, completePutative transposase9e-21102
NC_007498:134442:1538771538771557541878Pelobacter carbinolicus DSM 2380, complete genomehypothetical protein3e-20100
NC_019973:6102442:6121481612148161237392259Mesorhizobium australicum WSM2073, complete genomeintegrase family protein3e-20100
NC_010120:1065833:1074745107474510762891545Neisseria meningitidis 053442, complete genomeconserved hypothetical protein2e-1998.2
NC_007517:3430237:3435106343510634370161911Geobacter metallireducens GS-15, complete genometransposase2e-1997.8
NC_014307:2760347:2768927276892727708971971Ralstonia solanacearum CFBP2957 chromosome, complete genomehypothetical protein3e-1997.4
NC_020409:2222000:2225628222562822275471920Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeIntegrase catalytic region3e-1894
NC_012856:207194:2113422113422132341893Ralstonia pickettii 12D chromosome 1, complete genomeIntegrase catalytic region5e-1893.2
NC_013166:32474:3602436024378921869Kangiella koreensis DSM 16069, complete genomeTransposase-like Mu1e-1792
NC_007912:231817:2359352359352377701836Saccharophagus degradans 2-40, complete genomeUrease, beta subunit1e-1792
NC_014752:1063506:1072340107234010735271188Neisseria lactamica ST-640, complete genomeintegrase1e-1792
NC_012587:2326000:2339902233990223423252424Rhizobium sp. NGR234, complete genomehypothetical protein2e-1791.7
NC_009656:3127240:3138806313880631406501845Pseudomonas aeruginosa PA7 chromosome, complete genomeintegrase catalytic subunit2e-1687.8
NC_002678:5060670:5088718508871850903251608Mesorhizobium loti MAFF303099, complete genometransposase3e-1687.4
NC_015671:255808:2646962646962661051410Cellvibrio gilvus ATCC 13127 chromosome, complete genometransposase-like Mu4e-1687
NC_013235:3913000:3930560393056039322241665Nakamurella multipartita DSM 44233, complete genomeIntegrase catalytic region4e-1687
NC_009956:88354:9555895558970511494Dinoroseobacter shibae DFL 12 plasmid pDSHI02, complete sequenceintegrase catalytic region5e-1686.7
NC_007413:1405817:1407584140758414092661683Anabaena variabilis ATCC 29413, complete genomeIntegrase, catalytic region9e-1685.9
NC_019673:6394319:6402870640287064042431374Saccharothrix espanaensis DSM 44229 complete genomeputative integrase1e-1585.5
NC_010682:3033646:3051516305151630534381923Ralstonia pickettii 12J chromosome 1, complete sequenceTniA transposase5e-1583.2
NC_010682:1763769:1768716176871617706381923Ralstonia pickettii 12J chromosome 1, complete sequenceTniA transposase5e-1583.2
NC_010682:1652636:1669589166958916715111923Ralstonia pickettii 12J chromosome 1, complete sequencehypothetical protein1e-1482.4
NC_014550:3377834:3423654342365434251621509Arthrobacter arilaitensis Re117, complete genome1e-1481.6
NC_016616:2112211:2131716213171621343702655Dechlorosoma suillum PS chromosome, complete genomeMu transposase/integrase2e-1481.3
NC_017986:1885613:1888422188842218901011680Pseudomonas putida ND6 chromosome, complete genomeTniA3e-1480.9
NC_010086:1816378:1860062186006218627702709Burkholderia multivorans ATCC 17616 chromosome 2, completeIntegrase catalytic region3e-1480.9
NC_009255:1105786:1160917116091711636252709Burkholderia vietnamiensis G4 chromosome 2, complete sequenceintegrase catalytic subunit3e-1480.9
NC_020050:1:1313613136155262391Cylindrospermum stagnale PCC 7417 plasmid pCYLST.01, partialTnsA endonuclease family protein,integrase family protein5e-1480.1
NC_017986:5833819:5844511584451158462291719Pseudomonas putida ND6 chromosome, complete genomeintegrase catalytic subunit5e-1480.1
NC_012988:2507142:2508022250802225096801659Methylobacterium extorquens DM4, complete genometransposase of ISMdi29, ISNCY family6e-1479.7
NC_013893:1723939:1725148172514817265901443Staphylococcus lugdunensis HKU09-01 chromosome, complete genomeTn552 transposase6e-1479.7
NC_016616:2644883:2650240265024026519221683Dechlorosoma suillum PS chromosome, complete genomeMu transposase/integrase7e-1479.7
NC_016860:4055117:4082776408277640844551680Salmonella enterica subsp. enterica serovar Typhimurium strputative transposase TniA3e-1377.8
NC_009349:78000:8685886858885731716Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completeTniA protein3e-1377.8
NC_015146:144565:1445651445651459531389Arthrobacter phenanthrenivorans Sphe3 plasmid pASPHE301, completeMu transposase/integrase4e-1377
NC_010501:2511887:252698325269832527234252Pseudomonas putida W619, complete genomehypothetical protein9e-1375.9
NC_012968:507988:5105355105355131772643Methylotenera mobilis JLW8, complete genomeIntegrase catalytic region9e-1375.9
NC_009428:1441877:1458655145865514610602406Rhodobacter sphaeroides ATCC 17025 chromosome, complete genomehypothetical protein1e-1275.1
NC_007520:407627:4259384259384278481911Thiomicrospira crunogena XCL-2, complete genomeIntegrase, catalytic region3e-1274.3
NC_009050:212270:2620552620552644032349Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceIntegrase, catalytic region4e-1273.6
NC_003384:157158:1693331693331706191287Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid5e-1273.6
NC_013365:92973:1039281039281051961269Escherichia coli O111:H- str. 11128 plasmid pO111_1, completeTniA protein5e-1273.2
NC_012856:2633890:2649928264992826518261899Ralstonia pickettii 12D chromosome 1, complete genomeTniA transposase1e-1172
NC_010678:900389:9083519083519110532703Ralstonia pickettii 12J chromosome 2, complete sequenceIntegrase catalytic region1e-1172
NC_012857:41946:4990849908526102703Ralstonia pickettii 12D chromosome 2, complete genomeIntegrase catalytic region1e-1172
NC_011662:1:2182621826238141989Thauera sp. MZ1T, complete genomehypothetical protein1e-1172
NC_004578:20738:3397833978359331956Pseudomonas syringae pv. tomato str. DC3000, complete genometransposase1e-1172
NC_009349:78000:817558175510125019496Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete2e-1171.6
NC_011777:161505:1772771772771787221446Bacillus cereus AH820 plasmid pAH820_272, complete sequenceputative transposase2e-1171.2
NC_011884:2397248:2404335240433524070882754Cyanothece sp. PCC 7425, complete genomeIntegrase catalytic region2e-1171.2
NC_008209:761487:7708147708147729852172Roseobacter denitrificans OCh 114, complete genometransposase, putative6e-1169.7
NC_012988:1459961:1514073151407315164422370Methylobacterium extorquens DM4, complete genomehypothetical protein1e-1068.6
NC_008686:405159:4264664264664285982133Paracoccus denitrificans PD1222 chromosome 1, complete sequenceIntegrase, catalytic region5e-1067
NC_012691:779826:7950447950447972692226Tolumonas auensis DSM 9187, complete genomeIntegrase catalytic region8e-1066.2
NC_013441:5025444:5047476504747650497252250Gordonia bronchialis DSM 43247, complete genomeIntegrase catalytic region7e-1066.2
NC_009254:637952:6919556919556935831629Burkholderia vietnamiensis G4 chromosome 3, complete sequenceintegrase catalytic subunit1e-0965.5
NC_010505:5035668:5061208506120850634722265Methylobacterium radiotolerans JCM 2831, complete genomeIntegrase catalytic region4e-0963.9
NC_008061:2153495:2168333216833321701321800Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceIntegrase, catalytic region1e-0861.6
NC_008543:90312:99641996411014401800Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceIntegrase, catalytic region1e-0861.6
NC_015635:2001539:2018354201835420197691416Microlunatus phosphovorus NM-1, complete genomeputative transposase2e-0861.6
NC_016616:2997348:3024838302483830274982661Dechlorosoma suillum PS chromosome, complete genomeMu transposase/integrase2e-0861.2
NC_017075:1837966:1851199185119918539372739Rubrivivax gelatinosus IL144, complete genomeintegrase catalytic subunit3e-0860.5
NC_009050:212270:2669452669452692872343Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequencehypothetical protein4e-0860.5
NC_008435:2658986:2667838266783826700002163Rhodopseudomonas palustris BisA53, complete genomeIntegrase, catalytic region4e-0860.1
NC_007759:512477:5284755284755307392265Syntrophus aciditrophicus SB, complete genometransposase5e-0756.6
NC_012721:1986436:1998174199817419994301257Burkholderia glumae BGR1 chromosome 2, complete genome5e-0756.6
NC_015958:1516944:1516944151694415182571314Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeintegrase catalytic subunit1e-0655.5