Pre_GI: BLASTP Hits

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Query: NC_010498:4930649:4936987 Escherichia coli SMS-3-5, complete genome

Start: 4936987, End: 4939101, Length: 2115

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013941:5219841:5226179522617952282932115Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeATP-dependent DNA helicase, UvrD/REP family01455
NC_013941:5192500:5226179522617952282932115Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeATP-dependent DNA helicase, UvrD/REP family01455
NC_013008:5411285:5417623541762354197372115Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehelicase01455
NC_013008:5382917:5417623541762354197372115Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehelicase01455
NC_011353:5455224:5461562546156254636762115Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeATP-dependent DNA helicase, UvrD/REP family01455
NC_011353:5426793:5461562546156254636762115Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeATP-dependent DNA helicase, UvrD/REP family01455
NC_002695:5381576:5387914538791453900282115Escherichia coli O157:H7 str. Sakai, complete genomeputative DNA helicase01455
NC_010554:2646806:2704877270487727070122136Proteus mirabilis HI4320, complete genomeDNA helicase0859
NC_018679:1738126:1756438175643817585702133Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completeputative DNA helicase0729
NC_013216:1442044:1461394146139414635142121Desulfotomaculum acetoxidans DSM 771, complete genomeUvrD/REP helicase0654
NC_009434:3611738:3712833371283337149202088Pseudomonas stutzeri A1501, complete genomeputative DNA helicase1e-170600
NC_017068:1143515:1166667116666711688052139Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative UvrD/REP family DNA helicase3e-119429
NC_008146:861319:8862418862418883522112Mycobacterium sp. MCS, complete genomeUvrD/REP helicase2e-114413
NC_008705:868623:8949708949708970812112Mycobacterium sp. KMS, complete genomeUvrD/REP helicase2e-114413
NC_014210:3248526:3270944327094432730612118Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,UvrD/REP helicase6e-109395
NC_008278:6854759:6868682686868268708412160Frankia alni ACN14a, complete genomeputative DNA helicase1e-100367
NC_017093:6461486:6459294645929464614892196Actinoplanes missouriensis 431, complete genomeputative DNA helicase2e-96353
NC_018524:4235773:4249796424979642519342139Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeuvrD/REP helicase N-terminal domain protein2e-94347
NC_007645:5801295:5823205582320558252322028Hahella chejuensis KCTC 2396, complete genomeSuperfamily I DNA and RNA helicase7e-94345
NC_008740:1484531:1492814149281414948652052Marinobacter aquaeolei VT8, complete genomesuperfamily I DNA and RNA helicase6e-93342
NC_013441:382597:3963933963933985372145Gordonia bronchialis DSM 43247, complete genomeUvrD/REP helicase3e-90333
NC_008596:1302000:1343125134312513453382214Mycobacterium smegmatis str. MC2 155, complete genomeUvrD/Rep helicase3e-84313
NC_015576:612164:6325866325866348202235Mycobacterium sp. JDM601 chromosome, complete genomeUvrD/Rep helicase1e-82308
NC_017080:166180:1808561808561829672112Phycisphaera mikurensis NBRC 102666, complete genomeputative helicase4e-81303
NC_016010:1247008:1261395126139512634732079Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeSuperfamily I DNA and RNA helicase2e-81303
NC_013929:2375613:2431613243161324339072295Streptomyces scabiei 87.22 chromosome, complete genomehelicase6e-81302
NC_003902:1220600:1233504123350412355822079Xanthomonas campestris pv. campestris str. ATCC 33913, completeputative DNA helicase3e-80300
NC_008726:6393489:6431952643195264341652214Mycobacterium vanbaalenii PYR-1, complete genomeUvrD/REP helicase1e-77291
NC_008786:4579490:4593935459393545960852151Verminephrobacter eiseniae EF01-2, complete genomeUvrD/REP helicase3e-77290
NC_016111:1484424:1498642149864215009602319Streptomyces cattleya NRRL 8057, complete genomeDNA helicase4e-77290
NC_013757:3897413:3909839390983939120972259Geodermatophilus obscurus DSM 43160, complete genomeUvrD/REP helicase4e-76286
NC_015588:1213873:1233287123328712355662280Isoptericola variabilis 225 chromosome, complete genomehypothetical protein3e-74280
NC_015064:102224:1055191055191077112193Acidobacterium sp. MP5ACTX9 chromosome, complete genomeUvrD/REP helicase7e-73275
NC_003450:747000:7609037609037632032301Corynebacterium glutamicum ATCC 13032, complete genomeputative helicase8e-66252
NC_006958:748500:7623767623767646762301Corynebacterium glutamicum ATCC 13032, complete genomePUTATIVE DNA HELICASE8e-66252
NC_008278:744777:7563847563847576581275Frankia alni ACN14a, complete genomePutative DNA helicase2e-52207
NC_015740:3486226:349946134994613500420960Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeputative DNA helicase7e-37156
NC_005125:2887319:2900009290000929021322124Gloeobacter violaceus PCC 7421, complete genomehypothetical protein8e-37155
NC_009523:2769154:2783054278305427851862133Roseiflexus sp. RS-1 chromosome, complete genomeUvrD/REP helicase2e-32141
NC_016887:1949927:1949927194992719517831857Nocardia cyriacigeorgica GUH-2, complete genomeputative UvrD/REP helicase4e-32140
NC_011880:56543:6051160511625982088Cyanothece sp. PCC 7425 plasmid pP742501, complete sequenceUvrD/REP helicase7e-32139
NC_014720:4170:2587325873283322460Caldicellulosiruptor kronotskyensis 2002 chromosome, completelexa repressor1e-28129
NC_012034:6469:3152031520339792460Anaerocellum thermophilum DSM 6725, complete genomeLexA repressor7e-28126
NC_008536:2079052:2112674211267421140861413Solibacter usitatus Ellin6076, complete genomeputative DNA helicase1e-26122
NC_006177:1422932:1438983143898314410642082Symbiobacterium thermophilum IAM 14863, complete genomeputative DNA helicase6e-26119
NC_007510:973828:9833809833809867033324Burkholderia sp. 383 chromosome 1, complete sequenceSuperfamily I DNA and RNA helicases-like2e-23111
NC_015578:2191000:219700921970092197848840Treponema primitia ZAS-2 chromosome, complete genomeputative UvrD/REP helicase2e-23111
NC_019903:1745849:1745849174584917472641416Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,DNA/RNA helicase5e-23110
NC_020210:1275031:1294813129481312964831671Geobacillus sp. GHH01, complete genomehypothetical protein4e-22107
NC_006510:1400000:1415631141563114173011671Geobacillus kaustophilus HTA426, complete genomehypothetical protein6e-22106
NC_004722:4405363:4435208443520844366261419Bacillus cereus ATCC 14579, complete genomeSuperfamily I DNA and RNA helicases7e-2099.8
NC_020209:4312892:4327643432764343290581416Pseudomonas poae RE*1-1-14, complete genomehypothetical protein1e-1689
NC_015690:7785875:7806015780601578079401926Paenibacillus mucilaginosus KNP414 chromosome, complete genomeNERD domain-containing protein2e-1585.1
NC_016935:7872425:7878284787828478802091926Paenibacillus mucilaginosus 3016 chromosome, complete genomeNERD domain-containing protein5e-1583.6
NC_011768:1889853:1899436189943619008391404Desulfatibacillum alkenivorans AK-01, complete genomeSuperfamily I DNA and RNA helicase-like protein1e-1482.4
NC_014924:3334386:3341593334159333434701878Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeNERD domain protein2e-1482
NC_019902:3397170:3401800340180034035691770Thioalkalivibrio nitratireducens DSM 14787, complete genomeDNA helicase II; NERD domain-containing protein1e-1482
NC_011901:1860887:1879189187918918810481860Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeDNA helicase II2e-1481.3
NC_011961:891815:9152179152179172412025Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequencenerd domain protein6e-1480.1
NC_010002:4038500:4045257404525740470621806Delftia acidovorans SPH-1, complete genomeNERD domain protein4e-1377.4
NC_015726:3452232:3455641345564134574731833Cupriavidus necator N-1 chromosome 1, complete sequencehypothetical protein6e-1273.2
NC_008260:1885969:1904538190453819064331896Alcanivorax borkumensis SK2, complete genomeHypotetical protein1e-1172.4
NC_009801:3374501:3383223338322333851151893Escherichia coli E24377A, complete genomehelicase, UvrD family2e-1171.6
NC_010995:764567:7645677645677664021836Cellvibrio japonicus Ueda107, complete genomeputative DNA helicase II2e-1171.6
NC_014376:1842290:1845537184553718478252289Clostridium saccharolyticum WM1 chromosome, complete genomeUvrD/REP helicase3e-1170.9
NC_011757:97281:1100421100421110491008Methylobacterium chloromethanicum CM4, complete genomehypothetical protein8e-1169.3
NC_014507:2319842:2335593233559323386073015Methanoplanus petrolearius DSM 11571 chromosome, complete genomeUvrD/REP helicase9e-1169.3
NC_014803:709000:7160817160817179971917Pseudoalteromonas sp. SM9913 chromosome chromosome I, completeUvrD family helicase1e-1069.3
NC_014973:243000:2582002582002603922193Geobacter sp. M18 chromosome, complete genomeUvrD/REP helicase1e-1068.9
NC_014831:329983:3299833299833323582376Thermaerobacter marianensis DSM 12885 chromosome, complete genomeATP-dependent DNA helicase PcrA2e-1068.6
NC_009012:3354477:3399024339902434012492226Clostridium thermocellum ATCC 27405, complete genomeATP-dependent DNA helicase PcrA6e-1066.6
NC_011206:2685499:2685499268549926876282130Acidithiobacillus ferrooxidans ATCC 53993, complete genomeUvrD/REP helicase6e-1066.6
NC_011761:2785660:2785660278566027877892130Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeDNA helicase II6e-1066.6
NC_010067:1829041:1855895185589518579492055Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-0965.5
NC_010102:2020762:2039549203954920416032055Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0964.7
NC_003296:140889:1483601483601501981839Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completehypothetical protein2e-0964.7
NC_012125:2687980:2706778270677827088322055Salmonella enterica subsp. enterica serovar Paratyphi C strainDNA helicase IV3e-0964.3
NC_016599:3434996:3434996343499634373742379Owenweeksia hongkongensis DSM 17368 chromosome, complete genomeDNA/RNA helicase3e-0964.3
NC_004631:1881214:1903289190328919053432055Salmonella enterica subsp. enterica serovar Typhi Ty2, completehelicase IV3e-0964.3
NC_016832:1880174:1900139190013919021932055Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Helicase IV3e-0964.3
NC_011147:1802535:1825018182501818270722055Salmonella enterica subsp. enterica serovar Paratyphi A strDNA helicase IV4e-0963.9
NC_006511:1808815:1829835182983518318892055Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChelicase IV (75 kD helicase)4e-0963.9
NC_013406:6494079:6494079649407964964092331Paenibacillus sp. Y412MC10 chromosome, complete genomeATP-dependent DNA helicase PcrA5e-0963.5
NC_019978:2293327:2307011230701123091222112Halobacteroides halobius DSM 5150, complete genomeATP-dependent DNA helicase PcrA5e-0963.5
NC_011149:1035990:1035990103599010380442055Salmonella enterica subsp. enterica serovar Agona str. SL483,helicase IV6e-0963.5
NC_014310:94645:99969999691018071839Ralstonia solanacearum PSI07 megaplasmid, complete sequencehelicase protein8e-0962.8
NC_003919:2639080:2648746264874626515652820Xanthomonas axonopodis pv. citri str. 306, complete genomehelicase IV1e-0862.4
NC_014033:1152994:1154615115461511570442430Prevotella ruminicola 23 chromosome, complete genomeputative ATP-dependent DNA helicase PcrA1e-0862.4
NC_010718:3039434:3039434303943430416982265Natranaerobius thermophilus JW/NM-WN-LF, complete genomeUvrD/REP helicase2e-0861.6
NC_013525:1953920:1968327196832719706662340Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomeUvrD/REP helicase3e-0861.2
NC_019896:2805098:2819463281946328217422280Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein3e-0860.8
NC_017347:2017097:2027227202722720294192193Staphylococcus aureus subsp. aureus T0131 chromosome, completeATP-dependent DNA helicase, PcrA5e-0860.5
NC_014974:1539950:1545650154565015475151866Thermus scotoductus SA-01 chromosome, complete genomeATP-dependent DNA helicase PcrA1e-0758.9
NC_014837:1144500:1151150115115011545423393Pantoea sp. At-9b chromosome, complete genomeUvrD/REP helicase1e-0758.9
NC_017047:2042346:2042926204292620463183393Rahnella aquatilis HX2 chromosome, complete genomeUvrD/REP helicase1e-0758.9
NC_015556:130437:1304371304371326382202Pseudomonas fulva 12-X chromosome, complete genomeUvrD/REP helicase4e-0757.4
NC_017080:1981788:1981788198178819841962409Phycisphaera mikurensis NBRC 102666, complete genomeATP-dependent DNA helicase PcrA5e-0757
NC_010655:1160384:1160384116038411623902007Akkermansia muciniphila ATCC BAA-835, complete genomeUvrD/REP helicase5e-0757
NC_018012:3102215:3126846312684631290172172Thiocystis violascens DSM 198 chromosome, complete genomeDNA/RNA helicase7e-0756.2
NC_008752:2056547:2074331207433120767872457Acidovorax avenae subsp. citrulli AAC00-1, complete genomeUvrD/REP helicase7e-0756.2
NC_005241:157741:1767081767081786091902Ralstonia eutropha H16 megaplasmid pHG1, complete sequencehelicase superfamily protein I8e-0756.2
NC_018419:226000:2279972279972301502154Secondary endosymbiont of Ctenarytaina eucalypti chromosome,ATP-dependent DNA helicase UvrD8e-0756.2
NC_010102:997417:1014640101464010180233384Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-0655.8
NC_007644:2099878:2099878209987821020672190Moorella thermoacetica ATCC 39073, complete genomeATP-dependent DNA helicase PcrA1e-0655.8
NC_014363:1680578:1680578168057816832172640Olsenella uli DSM 7084 chromosome, complete genomeUvrD/REP helicase1e-0655.8
NC_008060:3155133:3199939319993932020262088Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceUvrD/REP helicase1e-0655.8
NC_009256:176403:1774401774401795272088Burkholderia vietnamiensis G4 chromosome 1, complete sequenceUvrD/REP helicase1e-0655.8
NC_017200:345502:3455023455023477512250Bacillus thuringiensis serovar finitimus YBT-020 chromosome,ATP-dependent DNA helicase PcrA2e-0655.1
NC_016779:312500:3133533133533156142262Bacillus cereus F837/76 chromosome, complete genomeATP-dependent DNA helicase UvrD/PcrA2e-0655.1
NC_008618:1526392:1530475153047515325472073Bifidobacterium adolescentis ATCC 15703, complete genomeputative helicase IV2e-0655.1
NC_009488:1871912:1899064189906419012142151Orientia tsutsugamushi str. Boryong, complete genomeDNA helicase II, CAI276903e-0654.7
NC_012438:192065:1930181930181951202103Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeATP-dependent DNA helicase PcrA3e-0654.7
NC_003919:5056650:5056650505665050586261977Xanthomonas axonopodis pv. citri str. 306, complete genomeATP-dependent DNA helicase2e-0654.7
NC_014618:2989000:3007002300700230090562055Enterobacter cloacae SCF1 chromosome, complete genomeUvrD/REP helicase2e-0654.7
NC_009441:4449500:4470831447083144731942364Flavobacterium johnsoniae UW101 chromosome, complete genomeUvrD/REP helicase3e-0654.3
NC_014752:197000:2004822004822026892208Neisseria lactamica ST-640, complete genomeDNA helicase II3e-0654.3
NC_013716:5201097:5253209525320952550231815Citrobacter rodentium ICC168, complete genomeputative DNA helicase3e-0654.3
NC_015684:362236:3640803640803657831704Oligotropha carboxidovorans OM5 chromosome, complete genomeDNA helicase, UvrD/Rep family protein4e-0653.9
NC_011386:136223:1629261629261646291704Oligotropha carboxidovorans OM5, complete genomeUvrD/REP helicase4e-0653.9
NC_007651:3719191:3719191371919137217372547Burkholderia thailandensis E264 chromosome I, complete sequenceATP-dependent DNA helicase Rep4e-0653.9
NC_014614:656000:6578816578816600432163Clostridium sticklandii, complete genomeATP-dependent DNA helicase4e-0653.9
NC_015696:610000:6267886267886290162229Francisella sp. TX077308 chromosome, complete genomeATP-dependent DNA helicase UvrD/PcrA6e-0653.5
NC_007434:111607:1258451258451280462202Burkholderia pseudomallei 1710b chromosome I, complete sequenceATP-dependent DNA helicase Rep6e-0653.1
NC_006350:3957454:3977437397743739795242088Burkholderia pseudomallei K96243 chromosome 1, complete sequenceATP-dependent DNA helicase Rep7e-0653.1
NC_009076:3876733:3891166389116638932532088Burkholderia pseudomallei 1106a chromosome I, complete sequenceATP-dependent DNA helicase Rep7e-0653.1
NC_009074:3791232:3815754381575438178412088Burkholderia pseudomallei 668 chromosome I, complete sequenceATP-dependent DNA helicase Rep7e-0653.1
NC_007645:713930:7350657350657372302166Hahella chejuensis KCTC 2396, complete genomeSuperfamily I DNA and RNA helicase8e-0653.1