Pre_GI Gene

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Host: NC_008278 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008278:6854759 Frankia alni ACN14a, complete genome

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
685475968563541596hypothetical protein putative Esteraselipasethioesterase and PRT domainsQuickGO ontologyBLASTP
68577046858300597hypothetical protein
6858396685846974tRNA-AlaQuickGO ontology
685881868614422625hypothetical protein putative ATPGTP-binding proteinQuickGO ontologyBLASTP
68614536862202750putative short-chain dehydrogenasereductaseQuickGO ontologyBLASTP
686228268635111230hypothetical proteinBLASTP
68634366863654219hypothetical protein
68636836864006324hypothetical proteinBLASTP
68640036864422420Putative regulatory proteinQuickGO ontologyBLASTP
68647376865072336hypothetical protein
68651846865360177putative TransposaseQuickGO ontology
686550968671791671hypothetical proteinBLASTP
686720368684771275hypothetical proteinBLASTP
68674376867760324hypothetical protein
68681156868405291hypothetical protein
686868268708412160putative DNA helicaseQuickGO ontologyBLASTP
687083868772726435Putative helicaseQuickGO ontologyBLASTP
687726968820534785putative Type II restriction enzyme methylase subunitQuickGO ontologyBLASTP