Pre_GI: BLASTP Hits

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Query: NC_010407:1114408:1134498 Clavibacter michiganensis subsp. sepedonicus chromosome, complete

Start: 1134498, End: 1135736, Length: 1239

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Causative agent of bacterial ring rot. Isolated from infected potato. This organism was first described and classified in 1914 as "Bacterium sepedonicus" and is considered a major plant pathogen. It is a phytopathogenic actinomycete that causes wilt and tuber rot in potato, which is a plant vascular disease with very high bacterial titers. Pathogenicity is believed to be associated with the presence of two plasmids, pCSL1 and pCSL2. This species is subdivided into five subspecies: michiganensis, sepedonicus, nebraskensis, tesselarius and insidiosus each of which infects specific hosts: tomato, potato, corn, wheat and alfalfa, respectively. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012527:288207:3034573034573045901134Deinococcus deserti VCD115 plasmid 1, complete sequenceacetylornithine deacetylase8e-58224
NC_009328:293000:3276293276293288581230Geobacillus thermodenitrificans NG80-2 chromosome, complete genomehypothetical protein5e-27122
NC_014624:287500:2888932888932900411149Eubacterium limosum KIST612 chromosome, complete genomeputative succinyl-diaminopimelate desuccinylase2e-20100
NC_012792:310443:3134073134073146751269Variovorax paradoxus S110 chromosome 2, complete genomepeptidase M206e-2099
NC_013517:3846747:3849344384934438505971254Sebaldella termitidis ATCC 33386, complete genomeacetylornithine deacetylase or succinyl- diaminopimelate desuccinylase2e-1894
NC_016845:2691129:2693983269398326951251143Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative acetylornithine deacetylase3e-1893.6
NC_012731:2650603:2653466265346626546081143Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative acetylornithine deacetylase3e-1893.6
NC_009648:1914621:1917454191745419185961143Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative acetylornithine deacetylase3e-1893.6
NC_011283:2684046:2705067270506727062091143Klebsiella pneumoniae 342 chromosome, complete genomepeptidase, ArgE/DapE family3e-1893.2
NC_013850:2685835:2709863270986327110051143Klebsiella variicola At-22 chromosome, complete genomeacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase3e-1893.2
NC_010002:2293670:2312976231297623142681293Delftia acidovorans SPH-1, complete genomepeptidase dimerisation domain protein4e-1789.7
NC_020210:2133996:2197515219751521987711257Geobacillus sp. GHH01, complete genomeacetylornithine deacetylase4e-1789.4
NC_015563:5162177:5163949516394951652411293Delftia sp. Cs1-4 chromosome, complete genomepeptidase M205e-1789
NC_008544:818730:8373698373698386281260Burkholderia cenocepacia HI2424 chromosome 3, complete sequenceacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase6e-1789
NC_014323:3669704:3675217367521736764191203Herbaspirillum seropedicae SmR1 chromosome, complete genomeacetylornithine deacetylase2e-1584.3
NC_014150:2399997:2408492240849224097601269Brachyspira murdochii DSM 12563 chromosome, complete genomeacetylornithine deacetylase or succinyl- diaminopimelate desuccinylase3e-1583.6
NC_013316:2309694:2325913232591323271001188Clostridium difficile R20291, complete genomeputative amidohydrolase3e-1583.2
NC_013315:2232339:2245359224535922465461188Clostridium difficile CD196 chromosome, complete genomepeptidase3e-1583.2
NC_017179:3540739:3555159355515935563461188Clostridium difficile BI1, complete genomepeptidase5e-1582.4
NC_013315:3532721:3547141354714135483281188Clostridium difficile CD196 chromosome, complete genomepeptidase5e-1582.4
NC_011740:2859933:2882065288206528834021338Escherichia fergusonii ATCC 35469, complete genomeputative peptidic bond hydrolase8e-1478.6
NC_010525:1314999:1315805131580513170041200Thermoproteus neutrophilus V24Sta, complete genomeacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase2e-1377
NC_019791:638500:6584156584156596501236Caldisphaera lagunensis DSM 15908 chromosome, complete genomeacetylornithine deacetylase/succinyl-diaminopimelate desuccinylase4e-1273.2
NC_018643:857911:8887898887898899671179Alpha proteobacterium HIMB5 chromosome, complete genomeacetylornithine deacetylase ArgE3e-1273.2
NC_010557:1030319:1031304103130410324761173Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceacetylornithine deacetylase (ArgE)2e-1170.9
NC_017253:31192:5105651056522011146Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) chromosome,acetylornithine deacetylase8e-1168.6
NC_011283:1811000:1875052187505218762121161Klebsiella pneumoniae 342 chromosome, complete genomeacetylornithine deacetylase1e-1068.2
NC_011834:31206:5107051070522151146Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum) chromosome,acetylornithine deacetylase1e-1068.2
NC_017252:31215:5107751077522221146Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum) chromosome,acetylornithine deacetylase1e-1068.2
NC_017255:31211:5107551075522201146Buchnera aphidicola str. LL01 (Acyrthosiphon pisum) chromosome,acetylornithine deacetylase2e-1067.4
NC_005773:5684000:5707645570764557088021158Pseudomonas syringae pv. phaseolicola 1448A, complete genomeacetylornithine deacetylase (ArgE)4e-1066.2
NC_017254:31206:5107251072522171146Buchnera aphidicola str. JF98 (Acyrthosiphon pisum) chromosome,acetylornithine deacetylase4e-1066.2
NC_010512:1196616:1212286121228612134491164Burkholderia cenocepacia MC0-3 chromosome 3, complete sequenceacetylornithine deacetylase (ArgE)5e-1066.2
NC_012912:4428111:4433351443335144345021152Dickeya zeae Ech1591, complete genomeacetylornithine deacetylase (ArgE)5e-1065.9
NC_012632:538967:5511565511565523671212Sulfolobus islandicus M.16.27 chromosome, complete genomesuccinyl-diaminopimelate desuccinylase1e-0965.1
NC_007760:645016:6607006607006618151116Anaeromyxobacter dehalogenans 2CP-C, complete genomeacetylornithine deacetylase (ArgE)1e-0965.1
NC_016051:1471782:1484477148447714856371161Thermococcus sp. AM4 chromosome, complete genomeacetylornithine deacetylase1e-0965.1
NC_012623:2004786:2018798201879820200091212Sulfolobus islandicus Y.N.15.51 chromosome, complete genomesuccinyl-diaminopimelate desuccinylase1e-0964.7
NC_007963:2644930:2676414267641426776221209Chromohalobacter salexigens DSM 3043, complete genomeacetylornithine deacetylase (ArgE)1e-0964.3
NC_014328:3294086:3302619330261933038031185Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative deacetylase2e-0964.3
NC_014643:892138:8921388921388935171380Rothia dentocariosa ATCC 17931 chromosome, complete genomeacetylornithine deacetylase5e-0962.8
NC_016070:719791:7271507271507283941245Thermoproteus tenax Kra 1, complete genomesuccinyl-diaminopimelate desuccinylase7e-0962
NC_016070:719791:7225897225897237821194Thermoproteus tenax Kra 1, complete genomesuccinyl-diaminopimelate desuccinylase9e-0961.6
NC_011653:331986:3486273486273498381212Thermosipho africanus TCF52B, complete genomeM20/DapE family protein YgeY2e-0860.5
NC_014761:1715377:1715377171537717164891113Oceanithermus profundus DSM 14977 chromosome, complete genomepeptidase m202e-0860.5
NC_014299:218252:2275232275232288241302Halalkalicoccus jeotgali B3 plasmid 2, complete sequenceacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase4e-0859.7
NC_014976:759129:7698357698357710731239Bacillus subtilis BSn5 chromosome, complete genomeacetylornithine deacetylase4e-0859.7
NC_016943:4799915:4800953480095348020411089Blastococcus saxobsidens DD2, complete genomeacetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase6e-0858.9
NC_004061:31500:5116051160523051146Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomeacetylornithine deacetylase6e-0858.9
NC_010610:908452:9297219297219307821062Lactobacillus fermentum IFO 3956, complete genomepeptidase1e-0758.2
NC_014804:1354970:1356820135682013579231104Thermococcus barophilus MP chromosome, complete genomeacetylornithine deacetylase1e-0757.8
NC_009468:38112:6181861818631281311Acidiphilium cryptum JF-5 plasmid pACRY02, complete sequenceacetylornithine deacetylase2e-0757.4
NC_014297:1:7895789591301236Halalkalicoccus jeotgali B3 chromosome, complete genomepeptidase M202e-0757.4
NC_014364:111000:1176511176511188651215Spirochaeta smaragdinae DSM 11293 chromosome, complete genomepeptidase M203e-0756.6
NC_016830:6499234:6517382651738265185391158Pseudomonas fluorescens F113 chromosome, complete genomeprotein ArgE4e-0756.2
NC_013169:1410384:1432724143272414340371314Kytococcus sedentarius DSM 20547, complete genomeacetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase4e-0756.2
NC_009142:2480608:2485190248519024865451356Saccharopolyspora erythraea NRRL 2338, complete genomeArgE/DapE/Acy1/Cpg2/yscS family5e-0756.2
NC_008043:86470:8848288482896691188Silicibacter sp. TM1040 mega plasmid, complete sequencepeptidase M207e-0755.5
NC_008269:428898:4333954333954347021308Rhodococcus sp. RHA1 plasmid pRHL1, complete sequenceprobable acetylornithine deacetylase7e-0755.5
NC_009033:133800:1402961402961415341239Staphylothermus marinus F1, complete genomeacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase9e-0755.1
NC_013093:832971:8542838542838553621080Actinosynnema mirum DSM 43827, complete genomesuccinyl-diaminopimelate desuccinylase1e-0655.1
NC_014820:71565:1003621003621014441083Cenarchaeum symbiosum A, complete genomeacetylornithine deacetylase/succinyl-diaminopimelate desuccinylase2e-0654.3
NC_008314:477722:5175305175305187051176Ralstonia eutropha H16 chromosome 2, complete sequenceacetylornithine deacetylase2e-0653.9
NC_014210:3170537:3173183317318331744661284Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase4e-0652.8
NC_012658:3126108:3141260314126031424771218Clostridium botulinum Ba4 str. 657 chromosome, complete genomepeptidase4e-0652.8
NC_010520:3120500:3136925313692531381421218Clostridium botulinum A3 str. Loch Maree, complete genomepeptidase, M20/M25/M40 family8e-0652
NC_009698:2921097:2936450293645029376671218Clostridium botulinum A str. Hall chromosome, complete genomepeptidase8e-0652
NC_009697:2984173:2999526299952630007431218Clostridium botulinum A str. ATCC 19397 chromosome, completepeptidase8e-0652
NC_009495:3051223:3066576306657630677931218Clostridium botulinum A str. ATCC 3502 chromosome, complete genomepeptidase8e-0652
NC_012563:3288124:3303558330355833047751218Clostridium botulinum A2 str. Kyoto, complete genomepeptidase, M20/M25/M40 family8e-0652