Pre_GI: BLASTP Hits

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Query: NC_010102:4557037:4558050 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 4558050, End: 4559339, Length: 1290

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016822:3946500:3947168394716839484571290Shigella sonnei 53G, complete genomearsenical pump membrane protein0664
NC_000913:3624826:3646958364695836482471290Escherichia coli K12, complete genomearsenite/antimonite transporter0664
NC_004741:4132056:4147018414701841483071290Shigella flexneri 2a str. 2457T, complete genomearsenical pump membrane protein0664
NC_004337:3590323:3625401362540136266901290Shigella flexneri 2a str. 301, complete genomearsenical pump membrane protein0664
NC_010473:3722571:3744703374470337459921290Escherichia coli str. K-12 substr. DH10B, complete genomearsenite/antimonite transporter0664
NC_010468:231000:2432322432322445211290Escherichia coli ATCC 8739, complete genomearsenical pump membrane protein0664
NC_009800:3685651:3691446369144636927351290Escherichia coli HS, complete genomearsenical pump membrane protein0664
NC_008258:3581583:3585187358518735864761290Shigella flexneri 5 str. 8401, complete genomearsenical pump membrane protein0664
CU928160:3709081:3712631371263137139201290Escherichia coli IAI1 chromosome, complete genomearsenite/antimonite transporter0664
NC_017328:3655876:3660397366039736617071311Shigella flexneri 2002017 chromosome, complete genomeputative Na+/H+ antiporter NhaD-like arsenite permease0664
NC_007613:3470314:3493874349387434951841311Shigella boydii Sb227, complete genomearsenical pump membrane protein0664
AP010958:4313462:4315867431586743171561290Escherichia coli O103:H2 str. 12009 DNA, complete genomearsenite/antimonite transporter ArsB0664
NC_004337:3621985:3625401362540136266901290Shigella flexneri 2a str. 301, complete genomearsenical pump membrane protein0664
NC_013364:4306000:4306825430682543081141290Escherichia coli O111:H- str. 11128, complete genomearsenite/antimonite transporter ArsB0664
NC_013361:4566779:4569415456941545707041290Escherichia coli O26:H11 str. 11368 chromosome, complete genomearsenite/antimonite transporter ArsB0664
NC_013353:4313462:4315867431586743171561290Escherichia coli O103:H2 str. 12009, complete genomearsenite/antimonite transporter ArsB0664
NC_012967:3549880:3579625357962535809141290Escherichia coli B str. REL606 chromosome, complete genomearsenite/antimonite transporter0664
NC_012947:248000:2602622602622615511290Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completearsenical pump membrane protein0664
NC_012759:3529657:3535452353545235367411290Escherichia coli BW2952 chromosome, complete genomearsenite/antimonite transporter0664
NC_011741:3709081:3712631371263137139201290Escherichia coli IAI1 chromosome, complete genomearsenite/antimonite transporter0664
NC_011415:3887997:3893792389379238950811290Escherichia coli SE11 chromosome, complete genomearsenite transport protein0664
AC_000091:3976888:3990191399019139914801290Escherichia coli W3110 DNA, complete genomearsenite/antimonite transporter0664
NC_009801:3956917:3960467396046739617561290Escherichia coli E24377A, complete genomearsenical pump membrane protein0664
CP002185:3822470:3844415384441538457041290Escherichia coli W, complete genomearsenite/antimonite transporter0663
CP002516:246767:2603692603692616581290Escherichia coli KO11, complete genomearsenical pump membrane protein0663
NC_016902:246767:2603692603692616581290Escherichia coli KO11FL chromosome, complete genomearsenical pump membrane protein0663
NC_011748:3983432:4013743401374340150321290Escherichia coli 55989, complete genomearsenite/antimonite transporter0662
CU928145:3983432:4013743401374340150321290Escherichia coli 55989 chromosome, complete genomearsenite/antimonite transporter0662
NC_010498:3838419:3860362386036238616511290Escherichia coli SMS-3-5, complete genomearsenical pump membrane protein0651
NC_009832:2596344:2611037261103726123261290Serratia proteamaculans 568, complete genomearsenical pump membrane protein0645
NC_009425:63709:8549385493867821290Enterobacter sp. 638 plasmid pENTE01, complete sequencearsenical pump membrane protein1e-178626
NC_011094:688626:6935786935786948671290Salmonella enterica subsp. enterica serovar Schwarzengrund strarsenical pump membrane protein2e-176618
NC_008577:2818546:2820383282038328216661284Shewanella sp. ANA-3 chromosome 1, complete sequencearsenical pump membrane protein3e-168591
NC_011283:785973:8076708076708089621293Klebsiella pneumoniae 342 chromosome, complete genomearsenical pump membrane protein8e-161566
NC_012912:2800884:2813715281371528149981284Dickeya zeae Ech1591, complete genomearsenical pump membrane protein2e-153542
NC_002947:2157648:2175256217525621765391284Pseudomonas putida KT2440, complete genomearsenite efflux transporter6e-146517
NC_013592:2703327:2718514271851427197971284Dickeya dadantii Ech586, complete genomearsenical pump membrane protein5e-145514
NC_011992:2279752:2283493228349322847791287Acidovorax ebreus TPSY, complete genomearsenical pump membrane protein2e-132472
NC_009138:467268:5038655038655051481284Herminiimonas arsenicoxydans, complete genomearsenical pump (Ars family)9e-132470
NC_004129:2440744:2440744244074424420271284Pseudomonas fluorescens Pf-5, complete genomearsenite efflux transporter3e-130465
NC_020209:1847895:1864615186461518658981284Pseudomonas poae RE*1-1-14, complete genomearsenical pump membrane protein2e-129462
NC_015690:3477573:3519260351926035205521293Paenibacillus mucilaginosus KNP414 chromosome, complete genomeYdfA2e-115416
NC_016047:683368:6911596911596924661308Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completehypothetical protein5e-113408
NC_014219:830966:8345798345798359101332Bacillus selenitireducens MLS10 chromosome, complete genomearsenical pump membrane protein2e-109395
UCMB5137:1:3707237072383701299Bacillus atrophaeus UCMB-5137putative metal-anion antiporter protein1e-107390
NC_006582:883922:9046839046839059811299Bacillus clausii KSM-K16, complete genomearsenic efflux pump2e-107389
NC_015420:35384:6148614874431296Lactobacillus buchneri NRRL B-30929 plasmid pLBUC01, completearsenical pump membrane protein2e-106385
NC_013205:576583:5965785965785978701293Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,Arsenical pump membrane protein2e-90333
NC_017192:276187:2975892975892988391251Arcobacter sp. L, complete genomearsenical pump membrane protein6e-89328
NC_010730:952574:9685079685079698051299Sulfurihydrogenibium sp. YO3AOP1, complete genomeArsenical pump membrane protein1e-88327
NC_017167:2203159:2221302222130222225941293Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1Arsenical pump membrane protein5e-84311
AC_000091:2747520:277082327708232771341519Escherichia coli W3110 DNA, complete genomepredicted inner membrane protein5e-76285
NC_000913:2746886:277018927701892770707519Escherichia coli K12, complete genomeCP4-57 prophage; predicted inner membrane protein5e-76285
NC_010473:2839902:286195428619542862472519Escherichia coli str. K-12 substr. DH10B, complete genomeCP4-57 prophage; predicted inner membrane protein5e-76285
NC_010067:1829041:184694918469491847380432Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-57223
NC_020272:430500:4542944542944556071314Bacillus amyloliquefaciens IT-45, complete genomeNa(+)/H(+) antiporter nhaB Sodium/proton antiporter nhaB1e-36154
NC_010067:1829041:184758318475831847939357Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-36153
NC_020387:745353:7565867565867578601275Dehalococcoides mccartyi BTF08, complete genomearsenical resistance efflux pump1e-26121
AC_000091:2747520:277149227714922771692201Escherichia coli W3110 DNA, complete genomehypothetical protein2e-23110
NC_010473:2839902:286262328626232862823201Escherichia coli str. K-12 substr. DH10B, complete genomeCP4-57 prophage; predicted protein2e-23110
NC_000913:2746886:277085827708582771058201Escherichia coli K12, complete genomeCP4-57 prophage; predicted protein2e-23110
NC_012988:1459961:151979515197951520214420Methylobacterium extorquens DM4, complete genome6e-21102
NC_010172:1199725:120366212036621203874213Methylobacterium extorquens PA1, complete genomeNa+/H+ antiporter NhaD and related arsenite permease-like protein2e-1687.4
NC_015733:715947:7430067430067442591254Pseudomonas putida S16 chromosome, complete genomearsenical pump membrane protein2e-1480.5
NC_010125:333895:3463883463883476411254Gluconacetobacter diazotrophicus PAl 5, complete genomeputative arsenical pump membrane protein6e-1272.4
NC_009953:2388605:2397979239797923992261248Salinispora arenicola CNS-205 chromosome, complete genomearsenical pump membrane protein2e-1170.9
NC_016027:2580477:2590612259061225918651254Gluconacetobacter xylinus NBRC 3288, complete genomearsenical membrane pump protein3e-1170.5
NC_011365:1171536:1182061118206111833141254Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeArsenical pump membrane protein1e-1068.2
NC_008343:2389710:2393412239341223946711260Granulibacter bethesdensis CGDNIH1, complete genomearsenical pump membrane protein1e-0861.2
NC_006510:1731939:173443917344391734762324Geobacillus kaustophilus HTA426, complete genomehypothetical protein4e-0756.6