Pre_GI: BLASTP Hits

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Query: NC_010102:1137247:1153133 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1153133, End: 1153624, Length: 492

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011094:1923870:194223519422351942726492Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein8e-88322
NC_011294:1220526:124922912492291249720492Salmonella enterica subsp. enterica serovar Enteritidis strphage terminase small subunit1e-86317
NC_016831:1690811:171102117110211711512492Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative phage terminase, small subunit1e-85315
NC_010067:2304313:232324923232492323740492Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein8e-85311
NC_011274:1299475:131340413134041313895492Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91phage terminase small subunit1e-84311
NC_011205:1391971:140295214029521403215264Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853gifsy-2 prophage protein2e-46184
NC_011083:1993672:201353320135332013796264Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,gifsy-2 prophage protein9e-46182
NC_003197:1945858:196451219645121964775264Salmonella typhimurium LT2, complete genomehypothetical protein9e-45179
NC_011080:1944226:196951819695181969781264Salmonella enterica subsp. enterica serovar Newport str. SL254,gifsy-2 prophage protein9e-45179
NC_016810:1903426:192208019220801922343264Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage protein9e-45179
NC_016856:1957263:197591719759171976180264Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein9e-45179
NC_016857:1903426:192208019220801922343264Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein9e-45179
NC_016863:1905454:192410819241081924371264Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein9e-45179
NC_017046:1902788:192144319214431921706264Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage protein9e-45179
NC_002695:2893951:291820729182072918683477Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein5e-45179
NC_011353:2892265:291239229123922912868477Escherichia coli O157:H7 str. EC4115 chromosome, complete genomebacteriophage terminase, small subunit5e-45179
NC_013008:2910567:291268729126872913163477Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein5e-45179
NC_011353:2957962:295796229579622958438477Escherichia coli O157:H7 str. EC4115 chromosome, complete genomebacteriophage terminase, small subunit1e-38158
NC_011740:2769961:277381427738142774332519Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein from phage origin6e-31133
NC_011205:1345511:137294613729461373479534Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853gifsy-2 prophage protein5e-31133
NC_016831:1734292:174013917401391740672534Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein5e-31133
NC_017060:59500:906009060091109510Rahnella aquatilis HX2 plasmid PRA1, complete sequencehypothetical protein1e-29128
NC_011742:4962008:497447449744744974965492Escherichia coli S88 chromosome, complete genomehypothetical protein8e-29125
NC_011740:4520373:453194245319424532433492Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein from putative prophage8e-29125
NC_008563:5011997:502446450244645024955492Escherichia coli APEC O1, complete genomehypothetical protein8e-29125
NC_011748:1773642:177984317798431780337495Escherichia coli 55989, complete genomeconserved hypothetical protein from putative prophage2e-27121
NC_011751:1859606:186539718653971865891495Escherichia coli UMN026 chromosome, complete genomehypothetical protein2e-27121
CU928145:1773642:177984317798431780337495Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein from putative prophage2e-27121
NC_011094:638552:667212667212667709498Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein3e-26117
NC_016612:3314846:333954133395413340032492Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein4e-25114
NC_017047:1906000:192064919206491921137489Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein6e-25113
NC_014121:1682638:170066017006601701160501Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein2e-24111
NC_007712:2028500:207731120773112077850540Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein4e-23107
NC_011294:1220526:123707612370761237387312Salmonella enterica subsp. enterica serovar Enteritidis str4e-22103
NC_013361:2138716:214451321445132145040528Escherichia coli O26:H11 str. 11368 chromosome, complete genometerminase small subunit5e-1890.1
NC_009800:1657550:166508916650891665616528Escherichia coli HS, complete genomehypothetical protein5e-1890.1
NC_009053:553298:575285575285575704420Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein2e-0961.6