Pre_GI: BLASTP Hits

Some Help

Query: NC_010001:3614314:3616223 Clostridium phytofermentans ISDg, complete genome

Start: 3616223, End: 3616636, Length: 414

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016627:4323370:433270143327014333120420Clostridium clariflavum DSM 19732 chromosome, complete genomeholin, Cph1 family5e-34142
NC_015519:2489728:250506925050692505479411Tepidanaerobacter sp. Re1 chromosome, complete genometoxin secretion/phage lysis holin5e-34142
NC_009012:1934107:194183819418381942257420Clostridium thermocellum ATCC 27405, complete genometoxin secretion/phage lysis holin1e-33141
NC_014410:800500:831814831814832233420Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,toxin secretion/phage lysis holin4e-33139
NC_016627:4270949:429324942932494293668420Clostridium clariflavum DSM 19732 chromosome, complete genometoxin secretion/phage lysis holin5e-33139
NC_010337:2793667:282029628202962820709414Heliobacterium modesticaldum Ice1, complete genomeholin, toxin secretion/phage lysis family protein3e-32137
NC_021184:4493440:451625145162514516661411Desulfotomaculum gibsoniae DSM 7213, complete genometoxin secretion/phage lysis holin2e-32137
NC_018870:2316499:233389923338992334318420Thermacetogenium phaeum DSM 12270 chromosome, complete genometoxin secretion/phage lysis holin2e-32137
NC_011898:3367457:337551233755123375928417Clostridium cellulolyticum H10, complete genometoxin secretion/phage lysis holin2e-32137
NC_010003:449192:458752458752459171420Petrotoga mobilis SJ95, complete genometoxin secretion/phage lysis holin3e-32136
NC_014393:4775452:478773647877364788146411Clostridium cellulovorans 743B chromosome, complete genometoxin secretion/phage lysis holin4e-32136
NC_015697:468234:489539489539489952414Lactobacillus reuteri SD2112 chromosome, complete genomeholin1e-31134
NC_008530:1454118:147817714781771478719543Lactobacillus gasseri ATCC 33323, complete genomePhage-related holin4e-31133
NC_010320:1268355:130813313081331308543411Thermoanaerobacter sp. X514 chromosome, complete genometoxin secretion/phage lysis holin4e-31133
NC_014538:1598106:160583816058381606248411Thermoanaerobacter sp. X513 chromosome, complete genometoxin secretion/phage lysis holin4e-31133
NC_009633:4097536:410966841096684110084417Alkaliphilus metalliredigens QYMF chromosome, complete genometoxin secretion/phage lysis holin2e-30130
NC_015697:506494:529966529966530388423Lactobacillus reuteri SD2112 chromosome, complete genomeholin7e-30129
NC_014828:1987487:199063319906331991046414Ethanoligenens harbinense YUAN-3 chromosome, complete genometoxin secretion/phage lysis holin1e-29128
NC_016791:4038069:404680440468044047244441Clostridium sp. BNL1100 chromosome, complete genometoxin secretion/phage lysis holin5e-29126
NC_007432:654904:696631696631697029399Streptococcus agalactiae A909, complete genomeprophage LambdaSa04, holin2e-28124
NC_011837:2605409:263310826331082633563456Clostridium kluyveri NBRC 12016, complete genomehypothetical protein3e-28123
NC_009706:2673906:270160527016052702045441Clostridium kluyveri DSM 555 chromosome, complete genomePhage holin-like protein4e-28123
NC_009328:293000:361435361435361845411Geobacillus thermodenitrificans NG80-2 chromosome, complete genomePhage tail-host specificity protein2e-27121
NC_015673:1038673:106087510608751061342468Corynebacterium resistens DSM 45100 chromosome, complete genomephage protein2e-26117
NC_021064:2001786:201523620152362015712477Propionibacterium avidum 44067, complete genomeholin protein4e-26116
NC_014246:1402500:142702814270281427582555Mobiluncus curtisii ATCC 43063 chromosome, complete genomeholin protein3e-26116
NC_021184:4095276:410599341059934106391399Desulfotomaculum gibsoniae DSM 7213, complete genometoxin secretion/phage lysis holin1e-25115
NC_013174:2163947:217257221725722172925354Jonesia denitrificans DSM 20603, complete genometoxin secretion/phage lysis holin3e-21100
NC_014915:2963500:300715330071533007548396Geobacillus sp. Y412MC52 chromosome, complete genometoxin secretion/phage lysis holin9e-1992
NC_014171:2519767:253580625358062536231426Bacillus thuringiensis BMB171 chromosome, complete genomehypothetical protein2e-1890.9
NC_011772:2495972:251176225117622512187426Bacillus cereus G9842, complete genomeputative prophage LambdaBa02, holin6e-1889.4
NC_007530:3749645:375099437509943751419426Bacillus anthracis str. 'Ames Ancestor', complete genomeprophage lambdaba02, holin, putative1e-1788.2
NC_003997:3724702:375086737508673751292426Bacillus anthracis str. Ames, complete genomeprophage LambdaBa02, holin, putative1e-1788.2
NC_005945:3747652:375136737513673751792426Bacillus anthracis str. Sterne, complete genomeprophage LambdaBa02, holin, putative1e-1788.2
NC_012659:3724729:375089437508943751319426Bacillus anthracis str. A0248, complete genomeputative prophage LambdaBa02, holin1e-1788.2
NC_010184:3464707:347056534705653470990426Bacillus weihenstephanensis KBAB4, complete genometoxin secretion/phage lysis holin1e-1788.2
NC_012581:755982:776470776470776895426Bacillus anthracis str. CDC 684 chromosome, complete genomeputative prophage LambdaBa01, holin2e-1787.8
NC_010183:27107:386633866339088426Bacillus weihenstephanensis KBAB4 plasmid pBWB404, completeprophage LambdaBa02, holin, putative3e-1787.4
NC_009674:2985878:299039429903942990834441Bacillus cytotoxicus NVH 391-98 chromosome, complete genometoxin secretion/phage lysis holin2e-1684.7
NC_010184:3631891:363558736355873636012426Bacillus weihenstephanensis KBAB4, complete genometoxin secretion/phage lysis holin2e-1684.3
NC_013411:597235:632070632070632483414Geobacillus sp. Y412MC61, complete genometoxin secretion/phage lysis holin5e-1683.2
NC_014915:2963500:297145229714522971865414Geobacillus sp. Y412MC52 chromosome, complete genometoxin secretion/phage lysis holin5e-1683.2
NC_015873:1241354:125118912511891251635447Megasphaera elsdenii DSM 20460, complete genomeprophage LambdaSa04 protein9e-1579
NC_014483:1179286:119715211971521197598447Paenibacillus polymyxa E681 chromosome, complete genomehypothetical protein1e-1478.2
NC_016641:2950000:296855829685582969004447Paenibacillus terrae HPL-003 chromosome, complete genometoxin secretion/phage lysis holin2e-1477.4
NC_010163:614634:654237654237654665429Acholeplasma laidlawii PG-8A chromosome, complete genomephage-related holin4e-1476.6
NC_011837:3226500:324475232447523245144393Clostridium kluyveri NBRC 12016, complete genomehypothetical protein5e-1476.3
NC_009706:3291330:331325033132503313642393Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein5e-1476.3
NC_014622:3676859:367685936768593677356498Paenibacillus polymyxa SC2 chromosome, complete genometoxin secretion/phage lysis holin3e-1373.6
NC_017297:3428429:343036134303613430777417Clostridium botulinum F str. 230613 chromosome, complete genometoxin secretion/phage lysis holin5e-1373.2
NC_009699:3429817:343174934317493432165417Clostridium botulinum F str. Langeland chromosome, complete genometoxin secretion/phage lysis holin5e-1373.2
NC_017068:1216548:123103512310351231415381Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative phage lysis holin7e-1372.8
NC_010520:2101515:210827021082702108689420Clostridium botulinum A3 str. Loch Maree, complete genometoxin secretion/phage lysis holin1e-1272
NC_017068:1852708:187566718756671875966300Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative phage lysis holin2e-1270.9
NC_016641:3772981:378491837849183785364447Paenibacillus terrae HPL-003 chromosome, complete genomephage lysis holin3e-1063.9
NC_013517:4117666:413453341345334134949417Sebaldella termitidis ATCC 33386, complete genometoxin secretion/phage lysis holin4e-1063.5
NC_014393:2868846:287571028757102876150441Clostridium cellulovorans 743B chromosome, complete genometoxin secretion/phage lysis holin9e-1062.4
NC_017195:1852935:185661818566181857040423Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeholin family1e-0962
NC_014976:627935:650252650252650674423Bacillus subtilis BSn5 chromosome, complete genomeputative holin2e-0960.8
UCMB5137:140766:153528153528153935408Bacillus atrophaeus UCMB-5137putative holin Lysis protein6e-0959.3
NC_012914:1851102:185110218511021851572471Paenibacillus sp. JDR-2, complete genometoxin secretion/phage lysis holin8e-0958.9
NC_017195:1230485:124102212410221241375354Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeputative holin1e-0858.5
NC_018866:1790564:180150218015021801903402Dehalobacter sp. DCA chromosome, complete genometoxin secretion/phage lysis holin4e-0856.6
NC_015589:2846000:284856228485622848888327Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeHolin toxin secretion/phage lysis9e-0855.8
NC_014376:916063:931490931490931909420Clostridium saccharolyticum WM1 chromosome, complete genometoxin secretion/phage lysis holin1e-0755.5
NC_017190:591139:600127600127600549423Bacillus amyloliquefaciens LL3 chromosome, complete genomeholin; Lysis protein1e-0755.1
NC_019842:1203291:121281912128191213241423Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,holin Lysis protein1e-0755.1
NC_020272:2748733:276203427620342762456423Bacillus amyloliquefaciens IT-45, complete genomeholin Lysis protein1e-0755.1