Pre_GI: BLASTP Hits

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Query: NC_009708:915814:927592 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 927592, End: 928482, Length: 891

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016514:3573400:358364235836423584538897Enterobacter cloacae EcWSU1 chromosome, complete genomeparB family protein8e-63240
NC_009801:2898426:290951329095132910409897Escherichia coli E24377A, complete genomeParB family protein2e-62239
NC_012967:2669182:268047526804752681371897Escherichia coli B str. REL606 chromosome, complete genomeParB family protein2e-62239
NC_012947:1106000:111342611134261114322897Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeParB domain protein nuclease2e-62239
NC_009436:3117661:312865431286543129550897Enterobacter sp. 638, complete genomenuclease3e-62238
NC_011283:4438500:447210044721004472972873Klebsiella pneumoniae 342 chromosome, complete genomeParB family protein2e-60232
NC_014562:2563466:257343525734352574307873Pantoea vagans C9-1 chromosome, complete genomepartitioning protein1e-59230
NC_007794:561623:570248570248571147900Novosphingobium aromaticivorans DSM 12444, complete genomeRepB plasmid partition2e-52206
NC_004578:20738:418524185242757906Pseudomonas syringae pv. tomato str. DC3000, complete genomeParB family protein2e-49196
NC_019973:6102442:611605961160596116952894Mesorhizobium australicum WSM2073, complete genomeputative transcriptional regulator1e-47190
NC_020209:4768500:479624847962484797156909Pseudomonas poae RE*1-1-14, complete genomeParB family protein5e-47188
NC_010814:1441327:144464914446491445515867Geobacter lovleyi SZ, complete genomeparB-like partition protein8e-47187
NC_005773:106000:112706112706113614909Pseudomonas syringae pv. phaseolicola 1448A, complete genomeParB family protein2e-46186
NC_007494:1:113081130812216909Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequenceParB-like nuclease2e-46186
NC_008358:2638245:267480326748032675714912Hyphomonas neptunium ATCC 15444, complete genomeParB family protein3e-46185
NC_011992:3375929:339069333906933391604912Acidovorax ebreus TPSY, complete genomeparB-like partition protein7e-46184
NC_008825:1258500:128814412881441289043900Methylibium petroleiphilum PM1, complete genomehypothetical protein2e-45182
NC_008826:170609:170609170609171508900Methylibium petroleiphilum PM1 plasmid RPME01, complete sequencehypothetical protein2e-45182
NC_009050:567209:587081587081587989909Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceRepB plasmid partition2e-45182
NC_003064:22535:417014170142588888Agrobacterium tumefaciens str. C58 plasmid AT, complete sequencehypothetical protein5e-45181
NC_003306:22228:413944139442281888Agrobacterium tumefaciens str. C58 plasmid AT, complete sequencepartitioning protein5e-45181
NC_012660:5793200:582339658233965824304909Pseudomonas fluorescens SBW25 chromosome, complete genomeputative ParB-like protein4e-45181
NC_004463:925140:947412947412948326915Bradyrhizobium japonicum USDA 110, complete genomepartitioning protein6e-44177
NC_008825:3161146:317093431709343171833900Methylibium petroleiphilum PM1, complete genomeputative ParB-like partioning protein5e-42171
NC_015381:1:703270327946915Burkholderia gladioli BSR3 chromosome 1, complete sequenceputative ParB-like protein3e-41168
NC_007651:72952:824928249283133642Burkholderia thailandensis E264 chromosome I, complete sequencestage 0 sporulation protein J, putative5e-40164
NC_010725:3315007:333987333398733340397525Methylobacterium populi BJ001, complete genome8e-36150
NC_014752:834616:871808871808872554747Neisseria lactamica ST-640, complete genomehypothetical protein2e-32139
NC_007651:3064530:315828331582833158693411Burkholderia thailandensis E264 chromosome I, complete sequencestage 0 sporulation protein J, putative2e-1686.3
NC_003923:2794686:281457428145742815413840Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein7e-0961.6
NC_002953:2773000:279391427939142794753840Staphylococcus aureus subsp. aureus MSSA476, complete genomeputative DNA-binding protein7e-0961.6
NC_003210:2879906:288021728802172881071855Listeria monocytogenes EGD-e, complete genomehypothetical protein9e-0960.8
NC_014210:5752651:576188657618865762830945Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,parB-like partition protein2e-0757
NC_011898:4044500:406076140607614061606846Clostridium cellulolyticum H10, complete genomeparB-like partition protein2e-0756.6
NC_009328:3504454:354266635426663543511846Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeDNA binding protein4e-0755.8
NC_014392:2513529:252011025201102520952843Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeparB-like partition protein4e-0652.4
NC_005945:5202176:522125852212585222130873Bacillus anthracis str. Sterne, complete genomestage 0 sporulation protein J, putative4e-0652.4
NC_003997:5200805:521988752198875220759873Bacillus anthracis str. Ames, complete genomestage 0 sporulation protein J, putative4e-0652.4
NC_012659:5200831:521991352199135220785873Bacillus anthracis str. A0248, complete genomeputative stage 0 sporulation protein J4e-0652.4
NC_017200:5325977:534808453480845348956873Bacillus thuringiensis serovar finitimus YBT-020 chromosome,stage 0 sporulation protein J4e-0652.4
NC_007005:6056765:608437960843796085251873Pseudomonas syringae pv. syringae B728a, complete genomeParB-like partition protein5e-0652
NC_007168:2631535:263625726362572637087831Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein5e-0652
NC_014098:3372000:337798333779833378837855Bacillus tusciae DSM 2912 chromosome, complete genomeparB-like partition protein6e-0652
NC_020134:2948000:296655529665552967397843Clostridium stercorarium subsp. stercorarium DSM 8532, completeparB-like partition protein6e-0651.6
NC_004722:5381208:540426854042685405140873Bacillus cereus ATCC 14579, complete genomeStage 0 sporulation protein J6e-0651.6
NC_007164:2446879:2456277245627724578031527Corynebacterium jeikeium K411, complete genomechromosome partitioning protein ParB6e-0651.6
NC_007492:6372900:642968364296836430555873Pseudomonas fluorescens PfO-1, complete genomeParB-like partition protein8e-0651.2
NC_017192:2114433:212712021271202127977858Arcobacter sp. L, complete genometranscriptional regulator involved in chromosome partitioning ParB8e-0651.2
NC_016771:5191937:521405052140505214922873Bacillus cereus NC7401, complete genomestage 0 sporulation protein J9e-0651.2
NC_011658:5239509:526162352616235262495873Bacillus cereus AH187 chromosome, complete genomeputative stage 0 sporulation protein J9e-0651.2