Pre_GI: BLASTP Hits

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Query: NC_009708:633054:645306 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 645306, End: 645863, Length: 558

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010465:660207:672399672399673013615Yersinia pseudotuberculosis YPIII, complete genomefilamentation induced by cAMP protein Fic9e-102369
NC_014618:690056:699310699310699864555Enterobacter cloacae SCF1 chromosome, complete genomefilamentation induced by cAMP protein fic4e-92336
NC_010634:4001154:400660540066054007012408Yersinia pseudotuberculosis PB1/+, complete genomefilamentation induced by cAMP protein Fic1e-73275
NC_006155:4062000:406639940663994066818420Yersinia pseudotuberculosis IP 32953, complete genome1e-73275
NC_009381:460358:476247476247476621375Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein1e-61235
NC_008150:3495851:350074535007453501119375Yersinia pestis Antiqua, complete genomehypothetical protein1e-61235
NC_008149:587689:603851603851604225375Yersinia pestis Nepal516, complete genomehypothetical protein1e-61235
NC_004088:3923804:392784439278443928155312Yersinia pestis KIM, complete genomehypothetical protein1e-52206
NC_017265:3790750:379320637932063793517312Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein1e-52206
NC_019902:1:698169817598618Thioalkalivibrio nitratireducens DSM 14787, complete genomeFic family putative cell filamentation protein7e-45179
NC_015458:3077804:308985430898543090483630Pusillimonas sp. T7-7 chromosome, complete genomehypothetical protein7e-39159
NC_008149:587689:603714603714603917204Yersinia pestis Nepal516, complete genomehypothetical protein2e-23108
NC_008150:3495851:350105335010533501256204Yersinia pestis Antiqua, complete genomehypothetical protein2e-23108
NC_009381:460358:476110476110476313204Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-23108
NC_017265:3790750:379351437935143793717204Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein2e-23108
NC_010634:4001154:400695840069584007221264Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein2e-23108
NC_004088:3923804:392815239281523928433282Yersinia pestis KIM, complete genomehypothetical protein2e-23108
NC_012912:1053618:106875510687551068889135Dickeya zeae Ech1591, complete genome3e-1787.8
NC_004547:3866439:387346738734673874063597Erwinia carotovora subsp. atroseptica SCRI1043, complete genomecell filamentation protein2e-1375.5
NC_012917:3684840:368532436853243685908585Pectobacterium carotovorum subsp. carotovorum PC1, complete genomefilamentation induced by cAMP protein Fic2e-1271.6
NC_014844:511552:523531523531524118588Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomefilamentation induced by cAMP protein Fic2e-1168.9
NC_016830:4639388:465094846509484651547600Pseudomonas fluorescens F113 chromosome, complete genomecell filamentation protein fic2e-1168.9
NC_017187:814940:825534825534826145612Arcobacter butzleri ED-1, complete genomeputative cell filamentation protein4e-1167.4
NC_015222:3137167:314575531457553146360606Nitrosomonas sp. AL212 chromosome, complete genomefilamentation induced by cAMP protein Fic1e-1066.2
NC_014844:442380:463353463353463940588Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomefilamentation induced by cAMP protein Fic1e-1066.2
NC_010161:1811000:1823441182344118258132373Bartonella tribocorum CIP 105476, complete genomeBepI protein2e-1065.5
NC_012846:1679184:1692301169230116955103210Bartonella grahamii as4aup, complete genomeBepI protein2e-1065.1
NC_017219:1163000:116712811671281167895768Bifidobacterium longum subsp. infantis ATCC 15697, complete genomecell filamentation protein2e-0962
NC_011593:1163000:116733711673371168104768Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,filamentation induced by cAMP protein fic2e-0962
NC_014616:1415951:142944214294421430212771Bifidobacterium bifidum S17 chromosome, complete genomeFic family protein5e-0960.8
NC_016048:2678205:268533326853332685929597Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein2e-0858.5
NC_020301:1449616:1457313145731314589111599Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomeBep protein3e-0858.2
NC_005956:1521736:1528692152869215302901599Bartonella henselae str. Houston-1, complete genomePutative cell filamentation protein3e-0858.2
NC_020301:1449616:1465240146524014664121173Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomeBep protein3e-0858.2
NC_009719:336000:337401337401337976576Parvibaculum lavamentivorans DS-1 chromosome, complete genomefilamentation induced by cAMP protein fic7e-0857
NC_005955:1259393:1263630126363012652311602Bartonella quintana str. Toulouse, complete genomePutative cell filamentation protein6e-0857
NC_010814:2275199:228705222870522287657606Geobacter lovleyi SZ, complete genomefilamentation induced by cAMP protein Fic9e-0856.6
NC_018870:757416:770804770804771439636Thermacetogenium phaeum DSM 12270 chromosome, complete genomeadenosine monophosphate-protein transferase Fic1e-0756.2
NC_010337:591264:604652604652605287636Heliobacterium modesticaldum Ice1, complete genomecell filamentation protein fic, putative1e-0756.2
NC_007519:2847816:285367428536742854279606Desulfovibrio alaskensis G20 chromosome, complete genomemobilization/cell filamentation protein-like protein1e-0756.2
NC_005956:1521736:1521736152173615233701635Bartonella henselae str. Houston-1, complete genomePutative cell filamentation protein2e-0755.8
NC_014655:130636:156583156583157191609Leadbetterella byssophila DSM 17132 chromosome, complete genomefilamentation induced by camp protein fic2e-0755.8
NC_020301:1449616:1452979145297914546071629Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomeBep protein2e-0755.5
NC_015697:33665:539615396154521561Lactobacillus reuteri SD2112 chromosome, complete genomefic protein3e-0755.1
NC_015424:3277292:3290821329082132918311011Aeromonas veronii B565 chromosome, complete genomeFic protein family4e-0754.3
NC_014158:233733:2337332337332348271095Tsukamurella paurometabola DSM 20162 chromosome, complete genomefilamentation induced by cAMP protein Fic4e-0754.3
NC_012846:1679184:1684104168410416857021599Bartonella grahamii as4aup, complete genomeBepC protein5e-0754.3
NC_009513:1065704:108357810835781084138561Lactobacillus reuteri F275, complete genomefilamentation induced by cAMP protein Fic8e-0753.5
NC_010995:1417329:142267514226751423277603Cellvibrio japonicus Ueda107, complete genomeFic family protein9e-0753.1
NC_019960:1198067:120932812093281210239912Prevotella dentalis DSM 3688 chromosome 1, complete sequenceprotein involved in cell division9e-0753.1
NC_020301:1449616:1450976145097614526041629Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomeBep protein1e-0652.8
NC_015571:1207000:121598112159811216874894Porphyromonas gingivalis TDC60, complete genomecell filamentation protein (fic)3e-0651.6
NC_008726:3858209:387762838776283878266639Mycobacterium vanbaalenii PYR-1, complete genomefilamentation induced by cAMP protein Fic4e-0650.8