Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4655577 Kineococcus radiotolerans SRS30216, complete genome

Start: 4655577, End: 4658348, Length: 2772

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009664:4423829:4660121466012146629882868Kineococcus radiotolerans SRS30216, complete genomeregulatory protein LuxR1e-117424
NC_009664:4696961:4699553469955347024382886Kineococcus radiotolerans SRS30216, complete genomeregulatory protein LuxR4e-110399
NC_009664:4423829:4671491467149146742592769Kineococcus radiotolerans SRS30216, complete genomeregulatory protein LuxR5e-91336
NC_019673:3041936:305598930559893056432444Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein3e-1894.7
NC_003888:7866148:7881841788184178846392799Streptomyces coelicolor A3(2), complete genometranscriptional regulator4e-1790.9
NC_008596:4104476:4124109412410941268412733Mycobacterium smegmatis str. MC2 155, complete genometranscriptional regulatory protein2e-1585.5
NC_017955:1555990:1555990155599015585392550Modestobacter marinus, complete genomeRegulatory protein5e-0860.5
NC_015656:3200500:320060832006083200949342Frankia symbiont of Datisca glomerata chromosome, complete genomeLuxR family transcriptional regulator8e-0860.1
NC_009953:3316782:3317705331770533208603156Salinispora arenicola CNS-205 chromosome, complete genomeATPase-like protein9e-0859.7
NC_012522:5987644:6010020601002060128692850Rhodococcus opacus B4, complete genomeputative LuxR family transcriptional regulator2e-0758.9
NC_016111:134444:1396081396081423852778Streptomyces cattleya NRRL 8057, complete genomeTranscriptional regulator, luxR family2e-0758.9
NC_003888:1395319:1406138140613814084802343Streptomyces coelicolor A3(2), complete genomemulti-domain regulatory protein3e-0758.2
NC_015564:2870631:2901783290178329034231641Amycolicicoccus subflavus DQS3-9A1 chromosome, complete genomeregulatory protein LuxR3e-0758.2
NC_013093:2471574:2482116248211624849862871Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, LuxR family4e-0757.8
NC_016887:3286436:3286436328643632882921857Nocardia cyriacigeorgica GUH-2, complete genomeLuxR family transcriptional regulator (fragment)4e-0757.8
NC_009565:2806000:2810784281078428141973414Mycobacterium tuberculosis F11, complete genomehypothetical transcriptional regulatory protein, luxR-family4e-0757.8
NC_009525:2802987:2809435280943528128483414Mycobacterium tuberculosis H37Ra, complete genomeLuxR family transcriptional regulator4e-0757.8
NC_002945:2757821:2764268276426827676813414Mycobacterium bovis AF2122/97, complete genomeLuxR family transcriptional regulator4e-0757.8
NC_000962:2791019:2797467279746728008803414Mycobacterium tuberculosis H37Rv, complete genomePROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (LUXR-FAMILY)4e-0757.8
NC_008769:2754828:2761274276127427646873414Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative transcriptional regulatory protein (luxR-family)4e-0757.8
NC_012207:2747599:2754045275404527574583414Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative transcriptional regulatory protein4e-0757.8
NC_016804:2735897:2740639274063927440523414Mycobacterium bovis BCG str. Mexico chromosome, complete genomeputative transcriptional regulatory protein, LuxR family4e-0757.8
NC_002755:2788000:2792955279295527962963342Mycobacterium tuberculosis CDC1551, complete genometranscriptional regulator, LuxR family3e-0757.8
NC_016887:3255500:326288632628863263536651Nocardia cyriacigeorgica GUH-2, complete genomeLuxR family two component transcriptional regulator5e-0757.4
NC_015848:2859145:2865525286552528688693345Mycobacterium canettii CIPT 140010059, complete genomeputative transcriptional regulatory protein5e-0757.4
NC_019950:2830682:2837062283706228404063345Mycobacterium canettii CIPT 140060008 complete genomePutative LuxR family transcriptional regulator5e-0757.4
NC_015953:6212366:624157962415796242253675Streptomyces sp. SirexAA-E chromosome, complete genomeLuxR family two component transcriptional regulator1e-0656.2
NC_014355:2635500:265823626582362658943708Candidatus Nitrospira defluvii, complete genomeputative LuxR family response regulator1e-0656.2
NC_008268:3418000:3423885342388534257231839Rhodococcus sp. RHA1, complete genomeprobable transcriptional regulator, LuxR family1e-0656.2
NC_012522:98567:1091781091781114962319Rhodococcus opacus B4, complete genomeputative LuxR family transcriptional regulator1e-0655.8
NC_018868:1960542:201229520122952012939645Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeresponse regulator receiver domain-containing protein2e-0655.1
NC_007777:1170406:1178211117821111806552445Frankia sp. CcI3, complete genometranscriptional regulator, LuxR family4e-0654.3
NC_013093:1909305:193086119308611931406546Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, LuxR family6e-0653.5
NC_009142:6199326:6200823620082362036542832Saccharopolyspora erythraea NRRL 2338, complete genometranscriptional regulator, LuxR family7e-0653.5
NC_015671:2371632:2385226238522623880992874Cellvibrio gilvus ATCC 13127 chromosome, complete genomeLuxR family transcriptional regulator7e-0653.5
NC_012660:3179980:320614832061483206801654Pseudomonas fluorescens SBW25 chromosome, complete genomeputative two-component system response regulator8e-0653.5