Pre_GI: BLASTP Hits

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Query: NC_009656:4527457:4657608 Pseudomonas aeruginosa PA7 chromosome, complete genome

Start: 4657608, End: 4658957, Length: 1350

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Non-respiratory clinical isolate from Argentina. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009656:4527457:4572105457210545733881284Pseudomonas aeruginosa PA7 chromosome, complete genomephage integrase family site specific recombinase3e-143508
NC_008463:4566976:4589452458945245907321281Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative integrase5e-143508
NC_021150:3698696:3720275372027537215221248Azotobacter vinelandii CA6, complete genomephage integrase8e-120431
NC_012560:3698697:3720276372027637215231248Azotobacter vinelandii DJ, complete genomephage integrase8e-120431
NC_004129:5481629:5491834549183454931711338Pseudomonas fluorescens Pf-5, complete genomesite-specific recombinase, phage integrase family3e-111402
NC_004578:895019:8995348995349009911458Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-104380
NC_007005:1605000:1607964160796416093701407Pseudomonas syringae pv. syringae B728a, complete genomePhage integrase2e-101370
NC_005773:4282840:4312613431261343141211509Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein7e-81301
NC_005773:866157:8716228716228728391218Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein3e-80299
NC_007005:830467:8359468359468371091164Pseudomonas syringae pv. syringae B728a, complete genome2e-64247
NC_014532:3596097:3632063363206336330971035Halomonas elongata DSM 2581, complete genomesite-specific recombinase, phage integrase family1e-55218
NC_004631:4494000:4511590451159045126031014Salmonella enterica subsp. enterica serovar Typhi Ty2, completeprobable phage integrase3e-54213
NC_003198:4513900:4528781452878145297941014Salmonella enterica subsp. enterica serovar Typhi str. CT18,probable phage integrase3e-54213
NC_016832:4482437:4499858449985845008711014Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Phage integrase3e-54213
NC_012214:537000:557388557388558347960Erwinia pyrifoliae Ep1/96, complete genomeintegrase8e-52204
NC_011149:4677412:467964346796434680569927Salmonella enterica subsp. enterica serovar Agona str. SL483,phage integrase5e-51202
NC_004547:667988:6873806873806884021023Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative phage integrase1e-50201
NC_009832:4482500:4486861448686144878921032Serratia proteamaculans 568, complete genomeintegrase family protein3e-49196
NC_010067:3056774:307494730749473075873927Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein6e-49195
NC_013892:1503162:1513287151328715142941008Xenorhabdus bovienii SS-2004 chromosome, complete genometyrosine recombinase-like2e-48193
NC_014228:3391500:3392691339269133936981008Xenorhabdus nematophila ATCC 19061, complete genomeputative phage integrase4e-48192
NC_014228:3505320:3510397351039735114131017Xenorhabdus nematophila ATCC 19061, complete genomeputative phage integrase9e-48191
NC_014029:331919:4017584017584027711014Yersinia pestis Z176003 chromosome, complete genomeintegrase2e-46187
NC_013421:701005:744192744192745166975Pectobacterium wasabiae WPP163, complete genomeintegrase family protein2e-45183
NC_009832:4564752:4572097457209745731101014Serratia proteamaculans 568, complete genomeintegrase family protein5e-45182
NC_009832:426993:4500724500724510851014Serratia proteamaculans 568, complete genomeintegrase family protein9e-45181
NC_016845:4498097:450306445030644503864801Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,Phage integrase2e-40167
NC_010554:2789722:2793999279399927950691071Proteus mirabilis HI4320, complete genomephage integrase8e-38158
NC_012913:1041969:106300810630081063919912Aggregatibacter aphrophilus NJ8700, complete genomeintegrase2e-35150
NC_011745:3405520:342713034271303427705576Escherichia coli ED1a chromosome, complete genomehypothetical protein1e-30134
NC_018691:2214464:221498022149802215912933Alcanivorax dieselolei B5 chromosome, complete genomeTyrosine recombinase xerC-like protein1e-27124
NC_010939:1986263:200437920043792004945567Actinobacillus pleuropneumoniae serovar 7 str. AP76, completePutative integrase2e-23110
NC_007005:830467:837051837051837347297Pseudomonas syringae pv. syringae B728a, complete genome3e-1893.2
NC_009792:3245368:326544332654433265901459Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-1688.2
NC_009792:3245368:326593832659383266234297Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-1583.2
NC_003143:1059580:106425410642541064562309Yersinia pestis CO92, complete genomeintegrase (partial)7e-1582.4
NC_006155:3805640:381032338103233810631309Yersinia pseudotuberculosis IP 32953, complete genome7e-1582.4
NC_015177:2642368:264457726445772645458882Pedobacter saltans DSM 12145 chromosome, complete genomeintegrase family protein3e-1377
NC_008149:3556999:356015835601583560406249Yersinia pestis Nepal516, complete genomeintegrase9e-1375.1
NC_014376:3593500:3603669360366936046881020Clostridium saccharolyticum WM1 chromosome, complete genomeintegrase family protein2e-1273.9
NC_012660:4734363:474106147410614741222162Pseudomonas fluorescens SBW25 chromosome, complete genome7e-1272.4
NC_014228:3391500:340640634064063406693288Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein1e-1171.2
NC_013939:1812259:181857918185791819487909Deferribacter desulfuricans SSM1, complete genometyrosine recombinase2e-1170.9
NC_012962:3864000:3866446386644638676481203Photorhabdus asymbiotica, complete genomeProbable phage integrase2e-1170.5
NC_019960:260997:272856272856273749894Prevotella dentalis DSM 3688 chromosome 1, complete sequencesite-specific recombinase XerD4e-1066.2
NC_012962:3864000:386616338661633866405243Photorhabdus asymbiotica, complete genomeputative integrase-like protein2e-0964.3
NC_006510:2910000:2939310293931029403231014Geobacillus kaustophilus HTA426, complete genomeintegrase/recombinase4e-0963.2
NC_015164:2859000:286196028619602862910951Bacteroides salanitronis DSM 18170 chromosome, complete genomeTyrosine recombinase xerC5e-0962.8
NC_014205:1257652:1257652125765212586531002Staphylothermus hellenicus DSM 12710 chromosome, complete genomeintegrase family protein6e-0962.4
NC_009441:4384500:439181043918104392727918Flavobacterium johnsoniae UW101 chromosome, complete genomephage integrase8e-0962
NC_015638:2045500:205110020511002051990891Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeTyrosine recombinase xerC2e-0860.5
NC_014011:962474:986923986923987858936Aminobacterium colombiense DSM 12261 chromosome, complete genomeintegrase family protein4e-0859.7
NC_016510:2426150:246974824697482470641894Flavobacterium columnare ATCC 49512 chromosome, complete genomeintegrase/recombinase XerC5e-0859.3
NC_009712:669647:689909689909690829921Candidatus Methanoregula boonei 6A8, complete genomephage integrase family protein7e-0858.9
NC_011773:1277606:129570712957071296627921Bacillus cereus AH820 chromosome, complete genomeintegrase/recombinase2e-0757.8
NC_004463:5540924:5547337554733755484551119Bradyrhizobium japonicum USDA 110, complete genomesimilar to site-specific integrase/recombinase2e-0757.8
NC_009464:180335:196349196349197185837Uncultured methanogenic archaeon RC-I, complete genomeintegrase2e-0757.4
NC_011297:1296968:129945012994501300340891Dictyoglomus thermophilum H-6-12, complete genometyrosine recombinase XerD2e-0757.4
NC_014541:4167916:416937741693774170267891Ferrimonas balearica DSM 9799 chromosome, complete genometyrosine recombinase XerC2e-0757.4
NC_012622:1646000:166542116654211666296876Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeintegrase family protein3e-0757
NC_017276:1491473:151314215131421514017876Sulfolobus islandicus REY15A chromosome, complete genomeXerC/D integrase-recombinase protein3e-0757
NC_017275:1635959:165762716576271658502876Sulfolobus islandicus HVE10/4 chromosome, complete genomeXerC/D integrase-recombinase protein3e-0757
NC_012588:1585808:160741616074161608291876Sulfolobus islandicus M.14.25 chromosome, complete genomeintegrase family protein4e-0756.6
NC_012726:1611936:163354616335461634421876Sulfolobus islandicus M.16.4 chromosome, complete genomeintegrase family protein4e-0756.6
NC_012623:960327:960327960327961202876Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeintegrase family protein3e-0756.6
NC_013769:1705500:172657917265791727454876Sulfolobus islandicus L.D.8.5 chromosome, complete genomephage integrase family protein3e-0756.6
NC_012881:1802000:183366218336621834585924Desulfovibrio salexigens DSM 2638, complete genomeintegrase family protein5e-0756.2
NC_018721:2759700:276193527619352762825891Psychroflexus torquis ATCC 700755 chromosome, complete genometyrosine recombinase XerC5e-0756.2
NC_013791:875224:8922118922118932571047Bacillus pseudofirmus OF4 chromosome, complete genomehypothetical protein6e-0755.8
NC_011295:33500:368853688537751867Coprothermobacter proteolyticus DSM 5265, complete genometyrosine recombinase XerD7e-0755.5
NC_015636:379000:394321394321395196876Methanothermococcus okinawensis IH1 chromosome, complete genomeintegrase family protein7e-0755.5
NC_008536:435221:442656442656443567912Solibacter usitatus Ellin6076, complete genomephage integrase family protein1e-0655.1
NC_014377:1227850:123809612380961238995900Thermosediminibacter oceani DSM 16646 chromosome, complete genometyrosine recombinase XerD subunit1e-0655.1
NC_014377:961259:973403973403974335933Thermosediminibacter oceani DSM 16646 chromosome, complete genomeintegrase family protein1e-0655.1
NC_013792:109203:1100861100861111921107Bacillus pseudofirmus OF4 plasmid pBpOF4-01, complete sequencesite-specific tyrosine recombinase XerS1e-0654.7
NC_021184:4456904:446240944624094463341933Desulfotomaculum gibsoniae DSM 7213, complete genomesite-specific recombinase XerD1e-0654.7
NC_007712:4023516:402260840226084023519912Sodalis glossinidius str. 'morsitans', complete genomephage integrase2e-0654.3
NC_008054:899441:8994418994419005171077Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeIntegrase/recombinase2e-0654.3
NC_020299:127480:145428145428146327900Candidatus Kinetoplastibacterium oncopeltii TCC290E, completeintegrase/recombinase XerD3e-0653.9
NC_012881:3520956:352492435249243525847924Desulfovibrio salexigens DSM 2638, complete genomeintegrase family protein3e-0653.9
NC_019908:121178:158426158426159352927Brachyspira pilosicoli P43/6/78 chromosome, complete genometyrosine recombinase XerD2e-0653.9
NC_018607:921923:958688958688959614927Brachyspira pilosicoli B2904 chromosome, complete genometyrosine recombinase2e-0653.9
NC_014330:505412:505412505412506278867Brachyspira pilosicoli 95/1000 chromosome, complete genometyrosine recombinase XerD2e-0653.9
NC_020291:4357425:436516743651674366105939Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometyrosine recombinase XerC3e-0653.5
NC_016001:905164:911276911276912172897Flavobacterium branchiophilum, complete genomeTyrosine recombinase XerC3e-0653.5
NC_017243:2955597:297425129742512975183933Brachyspira intermedia PWS/A chromosome, complete genomesite-specific recombinase XerD5e-0653.1
NC_013730:3695674:3716022371602237171941173Spirosoma linguale DSM 74, complete genomeintegrase family protein6e-0652.8
NC_009253:389835:392779392779393693915Desulfotomaculum reducens MI-1 chromosome, complete genomephage integrase family protein6e-0652.8
NC_012660:3320330:332033033203303321244915Pseudomonas fluorescens SBW25 chromosome, complete genomeputative phage integrase/recombinase5e-0652.8
NC_008529:887008:8870088870088880571050Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeSite-specific recombinase XerD5e-0652.8
NC_016790:1480441:148956714895671490475909Corynebacterium diphtheriae VA01 chromosome, complete genometyrosine recombinase XerC7e-0652.4
NC_012781:2552723:255584125558412556761921Eubacterium rectale ATCC 33656, complete genomeintegrase/recombinase-like protein7e-0652.4
NC_014727:966779:9835549835549846301077Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,site-specific recombinase xerd8e-0652