Pre_GI: BLASTP Hits

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Query: NC_009525:2635792:2646496 Mycobacterium tuberculosis H37Ra, complete genome

Start: 2646496, End: 2647560, Length: 1065

Host Lineage: Mycobacterium tuberculosis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain (H37Ra; ATCC 25177) is an avirulent strain derived from its virulent parent strain H37 (isolated from a 19 year-old male patient with chronic pulmonary tuberculosis by Edward R. Baldwin in 1905). Causative agent of tuberculosis. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of tuberculosis - a chronic infectious disease with a growing incidence worldwide. It infects 1.7 billion people a year (~33% of the entire world population) and causes over 3 million deaths/year. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. The sluggish growth rate is a result of the tough cell wall that resists the passage of nutrients into the cell and inhibits waste products to be excreted out of the cell. The specialized cell envelope of this organism resembles a modified Gram positive cell wall. It also contains complex fatty acids, such as mycolic acids, that cause the waxy appearance and impermeability of the envelope. These acids are found bound to the cell envelope, but also form cord factors when linked with a carbohydrate component to form a cord-like structure. Primary infection occurs by inhalation of the organism in droplets that are aerosolized by an infected person. The organism initially replicates in cells of the terminal airways, after which it is taken up by, and replicates in, alveolar macrophages. Macrophages distribute the organism to other areas of the lungs and the regional lymph nodes. Once a cell-mediated hypersensitivity immune response develops, replication of the organism decreases and the bacteria become restricted to developing granulomas.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016768:1769332:1776640177664017785081869Mycobacterium tuberculosis KZN 4207 chromosome, complete genomePPE family protein3e-61235
NC_012943:1769445:1776753177675317786211869Mycobacterium tuberculosis KZN 1435 chromosome, complete genomePPE family protein3e-61235
NC_015848:2684275:2693696269369626955191824Mycobacterium canettii CIPT 140010059, complete genomeppe family protein2e-60233
NC_010612:4501414:4511619451161945135291911Mycobacterium marinum M, complete genomePPE family protein4e-45182
NC_012943:1769445:1774168177416817760151848Mycobacterium tuberculosis KZN 1435 chromosome, complete genomePPE family protein1e-21104
NC_009525:2635792:2649656264965626515031848Mycobacterium tuberculosis H37Ra, complete genomePPE family protein1e-21103
NC_015848:2684275:2696301269630126981481848Mycobacterium canettii CIPT 140010059, complete genomePPE family protein1e-21103
NC_016768:1769332:1774055177405517759021848Mycobacterium tuberculosis KZN 4207 chromosome, complete genomePPE family protein1e-21103
NC_010612:5301135:5316112531611253179771866Mycobacterium marinum M, complete genomePPE family protein2e-1686.7
NC_010612:4501414:4513819451381945157441926Mycobacterium marinum M, complete genomePPE family protein6e-1685.1
NC_010612:5301135:5318444531844453217643321Mycobacterium marinum M, complete genomePPE family protein8e-1375.1
NC_020133:4911044:4931566493156649342052640Mycobacterium liflandii 128FXT, complete genome1e-1274.7
NC_017026:829444:848605848605849483879Mycobacterium tuberculosis RGTB327 chromosome, complete genomePPE family protein8e-1271.6
NC_012207:831030:8502468502468521831938Mycobacterium bovis BCG str. Tokyo 172, complete genomePPE family protein9e-1271.6
NC_002945:831029:8502938502938522301938Mycobacterium bovis AF2122/97, complete genomePPE family protein9e-1271.6
NC_016768:830000:8493058493058512451941Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein1e-1171.2
NC_012943:830000:8493018493018512411941Mycobacterium tuberculosis KZN 1435 chromosome, complete genomePPE family protein1e-1171.2
NC_010612:5653031:5659834565983456688549021Mycobacterium marinum M, complete genomePPE family protein1e-0654.3
NC_020133:5710661:5722718572271857243311614Mycobacterium liflandii 128FXT, complete genomePPE family protein3e-0653.1
NC_010612:6113155:6127439612743961290521614Mycobacterium marinum M, complete genomePPE family protein4e-0652.8
NC_013132:4803460:482649248264924827349858Chitinophaga pinensis DSM 2588, complete genomepentapeptide repeat containing protein7e-0652
NC_012207:2573562:2595923259592325973291407Mycobacterium bovis BCG str. Tokyo 172, complete genomePPE family protein8e-0651.6