Pre_GI: BLASTP Hits

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Query: NC_009512:469000:492662 Pseudomonas putida F1, complete genome

Start: 492662, End: 493171, Length: 510

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008463:632869:654237654237654779543Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase1e-62238
NC_009434:796878:820290820290820832543Pseudomonas stutzeri A1501, complete genome2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase6e-62236
NC_008260:2340824:234425723442572344769513Alcanivorax borkumensis SK2, complete genome7,8-dihydro-6-hydroxymethylpterin-pyrophosphokin a se6e-27120
NC_016445:2938887:296940029694002969906507Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase8e-22102
NC_010556:71776:789117891179402492Exiguobacterium sibiricum 255-15, complete genome2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase5e-1477
NC_014314:1:535253525879528Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, complete2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase2e-1374.7
NC_018665:71677:788247882479315492Exiguobacterium antarcticum B7 chromosome, complete genome2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase8e-1269.7
NC_016585:787498:805829805829806350522Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence7, 8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase1e-1168.9
NC_018704:81733:910129101291542531Amphibacillus xylanus NBRC 15112, complete genome2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase6e-1063.5
NC_015387:261799:282939282939283427489Marinithermus hydrothermalis DSM 14884 chromosome, complete genome2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase1e-0962.4
NC_009617:234782:235604235604236428825Clostridium beijerinckii NCIMB 8052 chromosome, complete genome2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase2e-0962
NC_017047:4037674:403767440376744038153480Rahnella aquatilis HX2 chromosome, complete genome2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase2e-0961.6
NC_012673:1600242:161595716159571616454498Exiguobacterium sp. AT1b, complete genome2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase3e-0961.2
NC_004193:79588:886638866389175513Oceanobacillus iheyensis HTE831, complete genome2-amino-4-hydroxy-6-hydroxymethyldihydropteridin e pyrophosphokinase3e-0960.8
NC_014328:680085:699482699482700309828Clostridium ljungdahlii ATCC 49587 chromosome, complete genomebifunctional folate synthesis protein9e-0959.7
NC_011567:75306:804088040880938531Anoxybacillus flavithermus WK1, complete genome7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase1e-0859.3
NC_011999:2023248:203318920331892033662474Macrococcus caseolyticus JCSC5402, complete genome2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase homolog3e-0858.2
NC_012121:139741:169996169996170478483Staphylococcus carnosus subsp. carnosus TM300, complete genome7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokin a se6e-0856.6
NC_014151:657382:6769836769836785601578Cellulomonas flavigena DSM 20109 chromosome, complete genome2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinase5e-0753.9
NC_008021:879508:902100902100902600501Streptococcus pyogenes MGAS9429, complete genome2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase5e-0753.5
NC_010473:118681:131357131357131836480Escherichia coli str. K-12 substr. DH10B, complete genome2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase1e-0652.4
AC_000091:144577:157253157253157732480Escherichia coli W3110 DNA, complete genome2-amino-4-hydroxy-6- hydroxymethyldihyropteridine pyrophosphokinase1e-0652.4
NC_000913:144577:157253157253157732480Escherichia coli K12, complete genome2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase1e-0652.4
NC_012759:144576:157252157252157731480Escherichia coli BW2952 chromosome, complete genome2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase1e-0652.4
NC_006085:308567:322857322857323414558Propionibacterium acnes KPA171202, complete genomeputative hydroxymethyldihydropteridine pyrophosphokinase1e-0652.4
NC_014039:334892:349155349155349712558Propionibacterium acnes SK137 chromosome, complete genome2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase1e-0652.4
NC_016511:308244:322480322480323037558Propionibacterium acnes TypeIA2 P.acn31 chromosome, complete2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase1e-0652.4
NC_016512:305240:321843321843322400558Propionibacterium acnes TypeIA2 P.acn17 chromosome, complete2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase1e-0652.4
NC_016516:300846:313277313277313834558Propionibacterium acnes TypeIA2 P.acn33 chromosome, complete2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase1e-0652.4
NC_010468:3835259:384206138420613842540480Escherichia coli ATCC 8739, complete genome2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase3e-0651.2
NC_011750:156799:168738168738169217480Escherichia coli IAI39 chromosome, complete genome2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase4e-0650.8
NC_010498:153755:167658167658168137480Escherichia coli SMS-3-5, complete genome2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase4e-0650.8
NC_011601:149428:163077163077163556480Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase5e-0650.4
NC_008253:149693:162702162702163181480Escherichia coli 536, complete genome2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase5e-0650.4
NC_011745:149594:163254163254163733480Escherichia coli ED1a chromosome, complete genome2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase6e-0650.1
NC_004431:153907:167802167802168281480Escherichia coli CFT073, complete genome2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase6e-0650.1