Pre_GI: BLASTP Hits

Some Help

Query: NC_009438:2939478:2947343 Shewanella putrefaciens CN-32 chromosome, complete genome

Start: 2947343, End: 2948284, Length: 942

Host Lineage: Shewanella putrefaciens; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella putrefaciens is a Gram-negative bacterium. It has been isolated from marine environments, as well as from anaerobic sandstone in the Morrison formation in New Mexico, USA. S. putrefaciens is also a facultative anaerobe with the ability to reduce iron and manganese metabolically; that is, it can use iron and manganese as the terminal electron acceptor in the electron transport chain (in contrast to obligate aerobes which must use oxygen for this purpose). It is also one of the organisms associated with the odor of rotting fish, as it is a marine organism which produces trimethylamines (hence the species name putrefaciens, from putrid). This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This species, along with Shewanella algae, are the only Shewanella spp. to be found in clinical speciments. Normally found in marine environments in warmer temperatures, infections seem to occur more frequently in countries with a warm climate and in other countries during warm summer months.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011753:206178:225132225132226067936Vibrio splendidus LGP32 chromosome 1, complete genomeputative dTDP-rhamnosyl transferase7e-76284
NC_007517:1468719:149225314922531493155903Geobacter metallireducens GS-15, complete genomeGlycosyl transferase, family 24e-62238
NC_009512:4408325:443092244309224431842921Pseudomonas putida F1, complete genomeglycosyl transferase, family 23e-60232
NC_015578:247266:269679269679270644966Treponema primitia ZAS-2 chromosome, complete genomedTDP-rhamnosyl transferase RfbG8e-56217
NC_009052:3381943:339144533914453392341897Shewanella baltica OS155, complete genomeglycosyl transferase, family 21e-55216
NC_007492:4563981:458039245803924581315924Pseudomonas fluorescens PfO-1, complete genomeGlycosyl transferase, family 23e-54212
NC_012968:1108687:112638511263851127296912Methylotenera mobilis JLW8, complete genomeglycosyl transferase family 28e-48191
NC_008258:2100646:211399321139932114898906Shigella flexneri 5 str. 8401, complete genomedTDP-rhamnosyl transferase2e-47189
NC_017328:2153083:216642921664292167334906Shigella flexneri 2002017 chromosome, complete genomedTDP-rhamnosyl transferase rfbG2e-47189
NC_014207:1366766:138117913811791382093915Methylotenera sp. 301 chromosome, complete genomeglycosyl transferase family 24e-46185
NC_004337:2098736:211212821121282112997870Shigella flexneri 2a str. 301, complete genomedTDP-rhamnosyl transferase4e-45182
NC_004741:2081649:209499520949952095864870Shigella flexneri 2a str. 2457T, complete genomedTDP-rhamnosyl transferase4e-45182
NC_012791:2052923:206799720679972068896900Variovorax paradoxus S110 chromosome 1, complete genomeglycosyl transferase family 21e-35150
NC_019897:4131337:414297841429784143907930Thermobacillus composti KWC4 chromosome, complete genomeglycosyl transferase family protein4e-2098.6
NC_009256:3540531:3567501356750135685591059Burkholderia vietnamiensis G4 chromosome 1, complete sequenceglycosyl transferase family protein1e-1687.4
NC_009379:304222:309377309377310345969Polynucleobacter sp. QLW-P1DMWA-1, complete genomeglycosyl transferase, family 23e-1686.3
NC_008781:3688965:369886436988643699796933Polaromonas naphthalenivorans CJ2, complete genomeglycosyl transferase, family 21e-1584
NC_002678:6232000:625120762512076252139933Mesorhizobium loti MAFF303099, complete genomesimilar to glycosyltransferase1e-1584
NC_007492:4563981:457739745773974578386990Pseudomonas fluorescens PfO-1, complete genomeGlycosyl transferase, family 22e-1583.2
NC_015634:359500:373288373288374190903Bacillus coagulans 2-6 chromosome, complete genomeputative glycosyl transferase4e-1582.4
NC_004578:1153738:1166480116648011674931014Pseudomonas syringae pv. tomato str. DC3000, complete genomeglycosyl transferase, group 2 family protein4e-1582.4
NC_011830:4722607:474615547461554747084930Desulfitobacterium hafniense DCB-2, complete genomeglycosyl transferase family 25e-1582
NC_017047:1862893:188472918847291885655927Rahnella aquatilis HX2 chromosome, complete genomeglycosyl transferase family protein8e-1581.3
NC_016641:834500:8377558377558387561002Paenibacillus terrae HPL-003 chromosome, complete genomeglycosyltransferase3e-1479.7
NC_009512:4408325:441647844164784417404927Pseudomonas putida F1, complete genomeglycosyl transferase, family 23e-1479.3
NC_014836:2723060:273428827342882735223936Desulfurispirillum indicum S5 chromosome, complete genomefamily 2 glycosyl transferase7e-1478.2
NC_005296:4574213:459355045935504594539990Rhodopseudomonas palustris CGA009, complete genomeputative glycosyltransferase1e-1377.4
NC_004567:1066710:108138010813801082306927Lactobacillus plantarum WCFS1, complete genomeglycosyltransferase (rhamnosyltransferase)2e-1377
NC_014837:2803447:281529928152992816240942Pantoea sp. At-9b chromosome, complete genomefamily 2 glycosyl transferase3e-1376.3
NC_015577:3113907:312626631262663127186921Treponema azotonutricium ZAS-9 chromosome, complete genomeputative rhamnosyltransferase5e-1375.5
NC_014207:1366766:138792213879221388848927Methylotenera sp. 301 chromosome, complete genomeglycosyl transferase family 26e-1375.1
NC_009831:3612206:362373936237393624737999Shewanella sediminis HAW-EB3, complete genomeglycosyltransferase-like protein1e-1274.3
NC_007517:2451547:245694924569492457875927Geobacter metallireducens GS-15, complete genomeGlycosyl transferase, family 21e-1273.9
NC_007946:2231872:224323622432362244171936Escherichia coli UTI89, complete genomeputative rhamnosyltransferase2e-1273.2
NC_012926:727716:738047738047738976930Streptococcus suis BM407 chromosome, complete genomeglycosyltransferase2e-1273.2
NC_009442:1216355:122885712288571229786930Streptococcus suis 05ZYH33 chromosome, complete genomepolysaccharide biosynthesis protein/ rhamnosyl transferase2e-1273.2
NC_012925:1125876:114016511401651141094930Streptococcus suis P1/7, complete genomeglycosyltransferase2e-1273.2
NC_005966:69689:705637056371492930Acinetobacter sp. ADP1, complete genomeputative glycosyl transferase family 23e-1272.8
NC_009615:3308538:332422033242203325068849Parabacteroides distasonis ATCC 8503 chromosome, complete genomeglycosyl transferase family protein2e-1170.1
NC_014334:1954333:196242319624231963364942Lactobacillus casei str. Zhang chromosome, complete genomeglycosyl transferase, family 22e-1170.1
NC_015850:761500:7692867692867718532568Acidithiobacillus caldus SM-1 chromosome, complete genomepolysaccharide biosynthesis protein9e-1167.8
NC_014727:1877764:189585118958511896762912Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,glycosyl transferase, family 21e-1067.4
NC_008532:973510:986185986185987093909Streptococcus thermophilus LMD-9, complete genomeGlycosyltransferase involved in cell wall biogenesis1e-1067.4
NC_016077:998741:103797510379751038904930Acidaminococcus intestini RyC-MR95 chromosome, complete genomeglycosyl transferase family protein3e-1065.9
NC_013198:2088780:209897720989772099912936Lactobacillus rhamnosus GG, complete genomepolysaccharide biosynthesis protein / rhamnosyl transferase, glycosyl transferase, family 24e-1065.5
NC_009801:2276131:229147622914762292456981Escherichia coli E24377A, complete genomeglycosyl transferase, group 2 family domain protein5e-1065.1
NC_009253:3272000:329863832986383299564927Desulfotomaculum reducens MI-1 chromosome, complete genomeglycosyl transferase family protein5e-0858.9
NC_009438:2939478:294831129483112949243933Shewanella putrefaciens CN-32 chromosome, complete genomeglycosyl transferase family protein1e-0757.4
NC_015975:99500:112224112224113135912Lactobacillus ruminis ATCC 27782 chromosome, complete genomeglycosyltransferase2e-0756.6
NC_017068:1788235:180375818037581804687930Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative glycosyl transferase family 2 protein3e-0756.2
NC_015500:900807:919432919432920187756Treponema brennaborense DSM 12168 chromosome, complete genomeglycosyl transferase family 21e-0654.3
NC_004307:1108325:114246811424681143409942Bifidobacterium longum NCC2705, complete genomeprobable glycosyltransferase2e-0653.9
NC_013199:2058857:2072281207228120733001020Lactobacillus rhamnosus Lc 705, complete genomeglycosyltransferase (WelI)1e-0653.9
NC_012814:1599241:161710916171091618074966Bifidobacterium animalis subsp. lactis Bl-04, complete genomeglycosyltransferase-like protein1e-0653.9
NC_012815:1603916:161682716168271617792966Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeglycosyltransferase-like protein1e-0653.9
NC_011835:733320:748037748037749002966Bifidobacterium animalis subsp. lactis AD011 chromosome, completeglycosyl transferase family protein1e-0653.9
NC_017214:299637:314349314349315314966Bifidobacterium animalis subsp. lactis BB-12 chromosome, completealpha-L-Rha alpha-1,3-L-rhamnosyltransferase1e-0653.9
NC_017215:1605917:162174316217431622708966Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,Hexosyltransferase1e-0653.9
NC_017216:1603000:161675416167541617719966Bifidobacterium animalis subsp. lactis BLC1, complete genomeglycosyl transferase family 21e-0653.9
NC_017217:1607679:162239616223961623361966Bifidobacterium animalis subsp. lactis V9 chromosome, completeglycosyltransferase-like protein1e-0653.9
NC_013202:59278:7005070050710541005Halomicrobium mukohataei DSM 12286, complete genomeglycosyl transferase family 22e-0653.1