Pre_GI: BLASTP Hits

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Query: NC_009381:3094939:3097219 Yersinia pestis Pestoides F chromosome, complete genome

Start: 3097219, End: 3097803, Length: 585

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Atypical strain isolated from the former Soviet Union, USSR. This strain lacks a plasminogen activator and is virulent by the aerosol route. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010634:1175404:1204546120454612057601215Yersinia pseudotuberculosis PB1/+, complete genomemajor facilitator transporter3e-83307
NC_006155:1191307:1222003122200312232171215Yersinia pseudotuberculosis IP 32953, complete genomeMFS cationic antimicrobial peptides (CAMPs) efflux/K+ antiporter, rosA subunit3e-83307
NC_004088:1196875:1225486122548612267001215Yersinia pestis KIM, complete genomedrug efflux protein4e-83306
NC_003143:3446740:3449065344906534502791215Yersinia pestis CO92, complete genomeputative membrane efflux protein4e-83306
NC_005810:872672:9033199033199045331215Yersinia pestis biovar Microtus str. 91001, complete genomeputative membrane efflux protein4e-83306
NC_008149:1122693:1154660115466011558741215Yersinia pestis Nepal516, complete genomemembrane efflux protein4e-83306
NC_008150:2878450:2880730288073028819441215Yersinia pestis Antiqua, complete genomeputative membrane efflux protein4e-83306
NC_010159:1288000:1316842131684213180561215Yersinia pestis Angola, complete genomefosmidomycin resistance protein4e-83306
NC_014029:3501500:3503469350346935046831215Yersinia pestis Z176003 chromosome, complete genomeputative membrane efflux protein4e-83306
NC_017154:3444497:3446434344643434476481215Yersinia pestis D106004 chromosome, complete genomeputative membrane efflux protein4e-83306
NC_017160:3426486:3428423342842334296371215Yersinia pestis D182038 chromosome, complete genomeputative membrane efflux protein4e-83306
NC_017168:2281040:2311787231178723130011215Yersinia pestis A1122 chromosome, complete genomeputative membrane efflux protein4e-83306
NC_017265:3240379:3242658324265832438721215Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative membrane efflux protein4e-83306
NC_009708:3411153:3413089341308934143031215Yersinia pseudotuberculosis IP 31758 chromosome, complete genomefosmidomycin resistance protein9e-83305
NC_010465:3465351:346728734672873467745459Yersinia pseudotuberculosis YPIII, complete genomeputative membrane efflux protein3e-78290
NC_015224:1391088:1413564141356414147961233Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative membrane efflux protein8e-75279
NC_008800:3330944:3334410333441033355161107Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative membrane efflux protein3e-60231
NC_020541:2551539:2573647257364725749811335Rhodanobacter sp. 2APBS1, complete genomenitrate/nitrite transporter5e-58223
NC_014840:286767:2867672867672879991233Pantoea sp. At-9b plasmid pPAT9B03, complete sequencemajor facilitator superfamily MFS_13e-48191
NC_015177:915366:9330859330859343081224Pedobacter saltans DSM 12145 chromosome, complete genomemajor facilitator superfamily MFS_14e-46184
NC_008752:2334511:2337544233754423388391296Acidovorax avenae subsp. citrulli AAC00-1, complete genomemajor facilitator superfamily MFS_14e-45180
NC_010511:7024412:7062182706218270633931212Methylobacterium sp. 4-46 chromosome, complete genomemajor facilitator superfamily transporter1e-43175
NC_014483:1146682:1165963116596311672311269Paenibacillus polymyxa E681 chromosome, complete genomeFosmidomycin resistance protein4e-40164
NC_016641:2894899:2928002292800229292701269Paenibacillus terrae HPL-003 chromosome, complete genomeFosmidomycin resistance protein2e-39162
NC_014933:2525393:2528977252897725301731197Bacteroides helcogenes P 36-108 chromosome, complete genomemajor facilitator superfamily MFS_13e-38157
NC_010511:2703684:2722369272236927236011233Methylobacterium sp. 4-46 chromosome, complete genomemajor facilitator superfamily transporter6e-37153
NC_019842:710308:7335147335147347431230Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein8e-34143
NC_009725:692237:7438087438087450371230Bacillus amyloliquefaciens FZB42, complete genomeYfnC8e-34143
NC_012914:5938566:5953287595328759545041218Paenibacillus sp. JDR-2, complete genomemajor facilitator superfamily MFS_13e-33141
NC_011772:1684404:1696978169697816981891212Bacillus cereus G9842, complete genomefosmidomycin resistance protein2e-31135
NC_009454:2663539:2697056269705626983511296Pelotomaculum thermopropionicum SI, complete genomearabinose efflux permease2e-1582
NC_016582:3763476:3764317376431737655701254Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative fosmidmycin resistance protein4e-1374.3
NC_008942:698353:6983536983536995731221Methanocorpusculum labreanum Z, complete genometranscriptional regulator, XRE family6e-1063.9
NC_018524:5066720:5087342508734250886311290Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomemajor Facilitator Superfamily protein3e-0858.2
NC_007907:5104476:5109103510910351103081206Desulfitobacterium hafniense Y51, complete genomehypothetical protein9e-0856.6