Pre_GI: BLASTP Hits

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Query: NC_009092:1874888:1899219 Shewanella loihica PV-4, complete genome

Start: 1899219, End: 1899566, Length: 348

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:775636:797772797772798119348Salmonella enterica subsp. enterica serovar Typhimurium str. 798succinate dehydrogenase hydrophobic membrane anchor protein8e-34142
NC_004631:2205821:220758722075872207934348Salmonella enterica subsp. enterica serovar Typhi Ty2, completesuccinate dehydrogenase cytochrome b556 small membrane subunit8e-34142
NC_010102:2322866:232536523253652325712348Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein8e-34142
NC_003198:751779:773155773155773502348Salmonella enterica subsp. enterica serovar Typhi str. CT18,succinate dehydrogenase cytochrome b556 small membrane subunit8e-34142
NC_011083:824659:846784846784847131348Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,succinate dehydrogenase, hydrophobic membrane anchor protein8e-34142
NC_003197:776238:798375798375798722348Salmonella typhimurium LT2, complete genomesuccinate dehydrogenase cytochrome b556 small membrane subunit8e-34142
NC_006511:2090058:209182420918242092171348Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCsuccinate dehydrogenase cytochrome b556 small membrane subunit8e-34142
NC_011080:780850:802986802986803333348Salmonella enterica subsp. enterica serovar Newport str. SL254,succinate dehydrogenase, hydrophobic membrane anchor protein8e-34142
NC_011094:842038:864124864124864471348Salmonella enterica subsp. enterica serovar Schwarzengrund strsuccinate dehydrogenase cytochrome b556 small membrane subunit8e-34142
NC_011147:2085241:208700720870072087354348Salmonella enterica subsp. enterica serovar Paratyphi A strsuccinate dehydrogenase cytochrome b556 small membrane subunit8e-34142
NC_016863:776734:798871798871799218348Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1succinate dehydrogenase cytochrome b556 small membrane subunit8e-34142
NC_016860:816000:837205837205837552348Salmonella enterica subsp. enterica serovar Typhimurium strsuccinate dehydrogenase cytochrome b556 small membrane subunit8e-34142
NC_016857:775649:797786797786798133348Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74succinate dehydrogenase cytochrome b556 small membrane subunit8e-34142
NC_016856:776735:798872798872799219348Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Ssuccinate dehydrogenase cytochrome b556 small membrane subunit8e-34142
NC_016832:2201860:220435922043592204706348Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Succinate dehydrogenase hydrophobic membrane anchor subunit8e-34142
NC_016810:775649:797786797786798133348Salmonella enterica subsp. enterica serovar Typhimurium strsuccinate dehydrogenase hydrophobic membrane anchor protein8e-34142
NC_003143:1233128:125377112537711254118348Yersinia pestis CO92, complete genomesuccinate dehydrogenase cytochrome b556 small membrane subunit1e-32138
NC_010159:1417993:143792314379231438270348Yersinia pestis Angola, complete genomesuccinate dehydrogenase, hydrophobic membrane anchor protein1e-32138
NC_008150:650899:670507670507670854348Yersinia pestis Antiqua, complete genomesuccinate dehydrogenase hydrophobic membrane anchor protein1e-32138
NC_010634:1342393:136521613652161365563348Yersinia pseudotuberculosis PB1/+, complete genomesuccinate dehydrogenase, hydrophobic membrane anchor protein1e-32138
NC_014029:1283500:130296813029681303315348Yersinia pestis Z176003 chromosome, complete genomesuccinate dehydrogenase cytochrome b556 small membrane subunit1e-32138
NC_017154:1225500:124506112450611245408348Yersinia pestis D106004 chromosome, complete genomesuccinate dehydrogenase cytochrome b556 small membrane subunit1e-32138
NC_017168:4155143:417578741757874176134348Yersinia pestis A1122 chromosome, complete genomesuccinate dehydrogenase cytochrome b556 small membrane subunit1e-32138
NC_017265:1136000:115510111551011155448348Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,succinate dehydrogenase, membrane subunit, binds cytochrome b5561e-32138
NC_012779:2755338:276217627621762762523348Edwardsiella ictaluri 93-146, complete genomesuccinate dehydrogenase, hydrophobic membrane anchor protein, putative3e-23107
NC_015740:1845370:185756618575661857934369Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completesuccinate dehydrogenase subunit D4e-22103
NC_009434:2006500:201993720199372020305369Pseudomonas stutzeri A1501, complete genomesuccinate dehydrogenase (D subunit)4e-22103
NC_009656:3817261:382711838271183827492375Pseudomonas aeruginosa PA7 chromosome, complete genomesuccinate dehydrogenase subunit D3e-22103
NC_007963:1370903:138907013890701389417348Chromohalobacter salexigens DSM 3043, complete genomesuccinate dehydrogenase (D subunit)7e-22102
NC_010678:642769:660454660454660819366Ralstonia pickettii 12J chromosome 2, complete sequencesuccinate dehydrogenase, hydrophobic membrane anchor protein8e-1475.9
NC_013861:728648:751953751953752312360Legionella longbeachae NSW150, complete genomesuccinate dehydrogenase, hydrophobic membrane anchor protein2e-1271.6
NC_014910:2015627:202818420281842028549366Alicycliphilus denitrificans BC chromosome, complete genomesuccinate dehydrogenase, hydrophobic membrane anchor protein1e-1065.1
NC_015696:517941:567875567875568228354Francisella sp. TX077308 chromosome, complete genomesuccinate dehydrogenase hydrophobic membrane anchor protein5e-1063.2
NC_015563:4773415:478200847820084782373366Delftia sp. Cs1-4 chromosome, complete genomesuccinate dehydrogenase, hydrophobic membrane anchor protein1e-0962
NC_005085:1096000:111223311122331112577345Chromobacterium violaceum ATCC 12472, complete genomesuccinate dehydrogenase, hydrophobic subunit1e-0962
NC_010336:996661:104642910464291046782354Francisella philomiragia subsp. philomiragia ATCC 25017, completesuccinate dehydrogenase hydrophobic membrane anchor protein2e-0961.6
NC_008245:66852:742807428074648369Francisella tularensis subsp. tularensis FSC 198, complete genomesuccinate dehydrogenase hydrophobic membrane anchor protein1e-0961.6
NC_010677:96470:146114146114146482369Francisella tularensis subsp. mediasiatica FSC147, complete genomesuccinate dehydrogenase, hydrophobic membrane anchor protein1e-0961.6
NC_008601:1733940:175083817508381751206369Francisella tularensis subsp. novicida U112, complete genomesuccinate dehydrogenase hydrophobic membrane anchor protein1e-0961.6
NC_006570:24636:742647426474632369Francisella tularensis subsp. tularensis Schu 4, complete genomesuccinate dehydrogenase hydrophobic membrane anchor protein1e-0961.6
NC_009257:151737:159180159180159533354Francisella tularensis subsp. tularensis WY96-3418 chromosome,succinate dehydrogenase, hydrophobic membrane anchor protein1e-0961.6
NC_016933:66854:742827428274650369Francisella tularensis TIGB03 chromosome, complete genomeSuccinate dehydrogenase hydrophobic membrane anchor protein1e-0961.6
NC_016937:66854:742827428274650369Francisella tularensis subsp. tularensis TI0902 chromosome,Succinate dehydrogenase hydrophobic membrane anchor protein1e-0961.6
NC_012559:2309566:231230323123032312653351Laribacter hongkongensis HLHK9, complete genomeSdhD2e-0961.2
NC_007880:1703346:172019917201991720567369Francisella tularensis subsp. holarctica, complete genomesuccinate dehydrogenase hydrophobic membrane anchor protein5e-0959.7
NC_008369:1702885:171983117198311720199369Francisella tularensis subsp. holarctica OSU18, complete genomesuccinate dehydrogenase5e-0959.7
NC_009749:1699152:171609817160981716451354Francisella tularensis subsp. holarctica FTA, complete genomesuccinate dehydrogenase hydrophobic membrane anchor protein5e-0959.7