Pre_GI: BLASTP Hits

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Query: NC_009092:1263964:1278259 Shewanella loihica PV-4, complete genome

Start: 1278259, End: 1278750, Length: 492

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008700:1115436:112770311277031128194492Shewanella amazonensis SB2B, complete genomemethylation site containing protein8e-62235
NC_008577:3738758:375181937518193752301483Shewanella sp. ANA-3 chromosome 1, complete sequencemethylation site containing protein2e-46184
NC_008321:3512471:352163235216323522114483Shewanella sp. MR-4, complete genomemethylation site containing protein2e-46184
NC_008322:3585601:359245435924543592921468Shewanella sp. MR-7, complete genomemethylation site containing protein1e-43175
NC_016901:1367443:138129713812971381791495Shewanella baltica OS678 chromosome, complete genometype IV pilus biogenesis protein, putative9e-39159
NC_009997:1368471:138070013807001381194495Shewanella baltica OS195, complete genometype IV pilus biogenesis protein, putative9e-39159
NC_009052:1211989:122584312258431226337495Shewanella baltica OS155, complete genometype IV pilus biogenesis protein, putative1e-38158
NC_009665:1332751:134498013449801345474495Shewanella baltica OS185 chromosome, complete genometype IV pilus biogenesis protein1e-38158
NC_011663:3818886:382695938269593827453495Shewanella baltica OS223 chromosome, complete genometype IV pilus biogenesis protein1e-38158
NC_004347:3670145:367551736755173676011495Shewanella oneidensis MR-1, complete genometype IV pilus biogenesis protein, putative9e-38155
NC_009092:1263964:127888712788871279399513Shewanella loihica PV-4, complete genometype IV pilus biogenesis protein, putative2e-25115
NC_009901:1309724:132208613220861322622537Shewanella pealeana ATCC 700345, complete genometype IV pilus biogenesis protein, putative4e-25113
NC_009901:1309724:132278513227851323297513Shewanella pealeana ATCC 700345, complete genometype IV pilus biogenesis protein, putative1e-24112
NC_008700:1115436:112831211283121128824513Shewanella amazonensis SB2B, complete genometype IV pilus biogenesis protein, putative6e-23106
NC_016901:1367443:138194013819401382452513Shewanella baltica OS678 chromosome, complete genometype IV pilus biogenesis protein, putative7e-22103
NC_009997:1368471:138134313813431381855513Shewanella baltica OS195, complete genometype IV pilus biogenesis protein, putative7e-22103
NC_009665:1332751:134562213456221346134513Shewanella baltica OS185 chromosome, complete genometype IV pilus biogenesis protein3e-21100
NC_011663:3818886:382629838262983826810513Shewanella baltica OS223 chromosome, complete genometype IV pilus biogenesis protein6e-2199.8
NC_004347:3670145:367471936747193675231513Shewanella oneidensis MR-1, complete genometype IV pilus biogenesis protein, putative2e-1995.1
NC_009052:1211989:122894412289441229399456Shewanella baltica OS155, complete genometype IV pilus biogenesis protein, putative8e-1889.4
NC_008321:3512471:352096535209653521477513Shewanella sp. MR-4, complete genomemethylation site containing protein7e-1683.2
NC_008322:3585601:359178735917873592299513Shewanella sp. MR-7, complete genomemethylation site containing protein7e-1683.2
NC_007645:6049340:606458060645806065065486Hahella chejuensis KCTC 2396, complete genomeTfp pilus assembly protein FimT4e-1580.5
NC_008577:3738758:375115337511533751665513Shewanella sp. ANA-3 chromosome 1, complete sequencemethylation site containing protein2e-1478.6
NC_006834:3422985:343885134388513439366516Xanthomonas oryzae pv. oryzae KACC10331, complete genomepre-pilin like leader sequence1e-1065.5
NC_007705:3429493:344311834431183443633516Xanthomonas oryzae pv. oryzae MAFF 311018, complete genomepre-pilin like leader sequence1e-1065.5
NC_003919:3113343:312715131271513127723573Xanthomonas axonopodis pv. citri str. 306, complete genomepre-pilin like leader sequence3e-1064.3
NC_010688:1908012:191838919183891918958570Xanthomonas campestris pv. campestris, complete genomeputative pilus assambly protein4e-1063.9
NC_017267:2955946:297047129704712970986516Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completepre-pilin like leader sequence5e-1063.9
NC_010688:1908012:192526019252601925811552Xanthomonas campestris pv. campestris, complete genomePutative type IV pilus assembly protein FimT9e-1062.8
NC_014924:936158:949900949900950445546Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeputative type IV pilus assembly protein fimt1e-0962.4
NC_003902:2933121:295714429571442957695552Xanthomonas campestris pv. campestris str. ATCC 33913, completefimbrial biogenesis protein2e-0962
NC_007086:1936505:195252419525241953075552Xanthomonas campestris pv. campestris str. 8004, complete genomefimbrial biogenesis protein2e-0962
NC_013889:216829:223007223007223531525Thioalkalivibrio sp. K90mix chromosome, complete genomehypothetical protein2e-0962
NC_007645:6049340:605699360569936057526534Hahella chejuensis KCTC 2396, complete genomeTfp pilus assembly protein FimT7e-0959.7
NC_008740:979830:991860991860992432573Marinobacter aquaeolei VT8, complete genomeTfp pilus assembly protein FimT2e-0858.5
NC_013889:216829:222396222396222914519Thioalkalivibrio sp. K90mix chromosome, complete genomepre-pilin like leader sequence2e-0858.2
NC_006834:3422985:342934234293423429884543Xanthomonas oryzae pv. oryzae KACC10331, complete genomefimbrial biogenesis protein9e-0856.2
NC_014924:936158:942163942163942729567Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomepre-pilin like leader sequence1e-0755.5
NC_011901:3363500:337896333789633379478516Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completefimbrial pilin related signal peptide protein2e-0755.5
NC_007508:3183631:320934132093413209859519Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative type IV pilus assembly protein FimT2e-0755.1
NC_015424:3890293:389684338968433897361519Aeromonas veronii B565 chromosome, complete genomeputative type IV pilus biogenesis protein2e-0754.7
NC_020829:4246847:425187142518714252371501Pseudomonas denitrificans ATCC 13867, complete genomemethylation3e-0754.3
NC_016147:2471451:247381424738142474377564Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehypothetical protein3e-0754.3
NC_009439:1075170:108727110872711087759489Pseudomonas mendocina ymp, complete genomeTfp pilus assembly protein FimT-like protein1e-0652.4
NC_015424:3520783:357348935734893573908420Aeromonas veronii B565 chromosome, complete genomemethylation site containing protein1e-0652.4
NC_018080:5192264:519949851994985200124627Pseudomonas aeruginosa DK2 chromosome, complete genometype 4 fimbrial biogenesis protein FimU2e-0652
NC_009434:1068281:107944110794411079977537Pseudomonas stutzeri A1501, complete genometype 4 fimbrial biogenesis protein FimU1e-0652
NC_008782:3361850:336604633660463366630585Acidovorax sp. JS42, complete genomeputative type-4 fimbrial pilin related signal peptide protein2e-0651.6
NC_015556:4118304:412566741256674126140474Pseudomonas fulva 12-X chromosome, complete genomehypothetical protein2e-0651.6
NC_008463:5364428:537069253706925371180489Pseudomonas aeruginosa UCBPP-PA14, complete genometype 4 fimbrial biogenesis protein FimU2e-0651.2
NC_010002:5752363:575812757581275758693567Delftia acidovorans SPH-1, complete genomeN-terminal methylation site-containing protein2e-0651.2
NC_008340:277223:286695286695287201507Alkalilimnicola ehrlichei MLHE-1, complete genomeputative type-4 fimbrial pilin related signal peptide protein3e-0651.2
NC_010995:3821327:383783638378363838366531Cellvibrio japonicus Ueda107, complete genomepre-pilin like leader sequence4e-0650.8
NC_008260:497855:503975503975504463489Alcanivorax borkumensis SK2, complete genomepilus biogenesis protein5e-0650.4
NC_010682:701912:709385709385710029645Ralstonia pickettii 12J chromosome 1, complete sequenceTfp pilus assembly protein FimT-like protein6e-0650.1
NC_003919:3060484:309325030932503093777528Xanthomonas axonopodis pv. citri str. 306, complete genomefimbrial biogenesis protein7e-0650.1
NC_010162:2717741:274203027420302742749720Sorangium cellulosum 'So ce 56', complete genomehypothetical protein7e-0650.1
NC_008740:979830:984867984867985451585Marinobacter aquaeolei VT8, complete genomeputative type-4 fimbrial pilin related signal peptide protein7e-0650.1
NC_015138:3927411:393113139311313931781651Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completegeneral secretion pathway, GspH8e-0649.7
NC_010717:3564955:357848335784833578956474Xanthomonas oryzae pv. oryzae PXO99A, complete genomepre-pilin like leader sequence9e-0649.3
NC_016147:2471451:247480224748022475335534Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative type IV pilus assembly protein FimT1e-0549.3