Pre_GI: BLASTP Hits

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Query: NC_008595:661507:674613 Mycobacterium avium 104, complete genome

Start: 674613, End: 675725, Length: 1113

Host Lineage: Mycobacterium avium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: It was derived from an AIDS patient and has been characterized for virulence in the murine model of low-dose aerosol infection in that it could colonize the lung, proliferate within the tissue and disseminate to other organs. Environmental organism which causes infections in birds and humans. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, Mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium avium is ubiquitous in the environment, and can be found in stagnant waters and soils. This organism causes tuberculosis in birds and disseminated infections in immunocompromized humans (the elderly, children, and especially patients with AIDS). Infection results in a characteristic pulmonary disease which requires expensive drug therapy for successful treatment. Most prevalent colony morphotypes are smooth opaque, smooth transparent and rough, with the last two being the faster growers in vivo.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014814:483444:4965664965664977531188Mycobacterium sp. Spyr1 chromosome, complete genomesite-specific recombinase XerD3e-70265
NC_014168:3013697:3030173303017330314411269Segniliparus rotundus DSM 44985 chromosome, complete genomeintegrase family protein2e-58226
NC_015953:6212366:6257234625723462584181185Streptomyces sp. SirexAA-E chromosome, complete genomeintegrase family protein6e-29128
NC_009338:2925286:2933811293381129352261416Mycobacterium gilvum PYR-GCK chromosome, complete genomephage integrase family protein8e-26118
NC_008726:3968222:3985746398574639871611416Mycobacterium vanbaalenii PYR-1, complete genomephage integrase family protein9e-26117
NC_012526:300126:3162543162543173931140Deinococcus deserti VCD115, complete genomeputative Tyrosine recombinase xerC-like protein2e-22107
NC_007777:135222:1403051403051416001296Frankia sp. CcI3, complete genomephage integrase3e-21103
NC_013921:1396500:1398270139827013994661197Thermoanaerobacter italicus Ab9 chromosome, complete genomeintegrase family protein6e-21102
NC_014650:603500:6101966101966113951200Geobacillus sp. Y4.1MC1 chromosome, complete genomeintegrase4e-2099.4
NC_014964:2272413:2294058229405822951761119Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeintegrase family protein2e-1997.4
NC_015656:454500:466640466640467551912Frankia symbiont of Datisca glomerata chromosome, complete genome2e-1893.6
NC_009012:2927793:2931283293128329323951113Clostridium thermocellum ATCC 27405, complete genomephage integrase3e-1893.2
NC_014335:2274774:229993922999392300787849Bacillus cereus biovar anthracis str. CI chromosome, completeDNA integration/recombination/invertion protein1e-1791.3
NC_008146:1535827:1544982154498215463101329Mycobacterium sp. MCS, complete genomephage integrase6e-1789
NC_014650:2969866:2987769298776929889231155Geobacillus sp. Y4.1MC1 chromosome, complete genomeintegrase7e-1788.6
NC_008705:1537080:1549290154929015504711182Mycobacterium sp. KMS, complete genomephage integrase family protein6e-1788.6
NC_007644:1847000:1850618185061818517901173Moorella thermoacetica ATCC 39073, complete genomePhage integrase8e-1788.2
NC_015635:5222000:5244912524491252461351224Microlunatus phosphovorus NM-1, complete genomeputative integrase8e-1788.2
NC_010572:4181403:4204639420463942059101272Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative phage integrase2e-1687
NC_017278:48630:6202062020631921173Thermus sp. CCB_US3_UF1 chromosome, complete genomeDNA integration/recombination/inversion protein5e-1685.5
NC_002936:1319266:1333144133314413343041161Dehalococcoides ethenogenes 195, complete genomesite-specific recombinase, phage integrase family5e-1685.5
NC_007907:960104:974182974182975108927Desulfitobacterium hafniense Y51, complete genomehypothetical protein7e-1685.1
NC_008148:2231045:2231045223104522321811137Rubrobacter xylanophilus DSM 9941, complete genomephage integrase1e-1584.3
NC_013235:508585:5258015258015269161116Nakamurella multipartita DSM 44233, complete genomeintegrase family protein1e-1584.3
NC_013510:5115500:5140302514030251415311230Thermomonospora curvata DSM 43183, complete genomeintegrase family protein2e-1583.6
NC_009328:814530:8199338199338210961164Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeDNA integration/recombination/invertion protein3e-1582.8
NC_002936:797110:8092918092918105981308Dehalococcoides ethenogenes 195, complete genomesite-specific recombinase, phage integrase family6e-1582
NC_015656:381554:3852123852123865521341Frankia symbiont of Datisca glomerata chromosome, complete genomeintegrase family protein7e-1581.6
NC_015312:1191633:1191633119163311929731341Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeintegrase family protein2e-1480.5
NC_009455:820821:8332778332778343831107Dehalococcoides sp. BAV1 chromosome, complete genomephage integrase family protein3e-1480.1
NC_016943:1037000:1037784103778410391991416Blastococcus saxobsidens DD2, complete genomeintegrase3e-1480.1
NC_009921:6483660:6508769650876965099771209Frankia sp. EAN1pec, complete genomeintegrase family protein2e-1480.1
NC_015434:228912:2442632442632454801218Verrucosispora maris AB-18-032 chromosome, complete genomeintegrase family protein4e-1479.3
NC_011899:355638:3706253706253718001176Halothermothrix orenii H 168, complete genomephage integrase family protein5e-1479
NC_014650:2969866:2985102298510229862921191Geobacillus sp. Y4.1MC1 chromosome, complete genomeintegrase7e-1478.6
NC_014666:13876:3056730567317601194Frankia sp. EuI1c chromosome, complete genomeintegrase family protein7e-1478.6
NC_016048:3983500:3997359399735939985821224Oscillibacter valericigenes Sjm18-20, complete genomeputative site-specific recombinase1e-1378.2
NC_002678:341996:3464553464553476541200Mesorhizobium loti MAFF303099, complete genomebacteriophage integrase3e-1376.6
NC_014165:2928464:293236429323642932969606Thermobispora bispora DSM 43833 chromosome, complete genomeintegrase family protein4e-1375.9
NC_005835:1773482:1778579177857917797571179Thermus thermophilus HB27, complete genomeDNA integration/recombination/invertion protein6e-1375.5
NC_014923:3968000:3973952397395239751571206Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeintegrase family protein8e-1375.1
NC_020387:796253:8023368023368034931158Dehalococcoides mccartyi BTF08, complete genomesite-specific recombinase, phage integrase family9e-1374.7
NC_009921:6691089:6703155670315567044351281Frankia sp. EAN1pec, complete genomeintegrase family protein1e-1274.7
NC_019897:3057000:3064727306472730658631137Thermobacillus composti KWC4 chromosome, complete genomesite-specific recombinase XerD2e-1273.6
NC_021182:4367736:4386211438621143874551245Clostridium pasteurianum BC1, complete genomesite-specific recombinase XerD2e-1273.6
NC_015953:3313000:3333581333358133351941614Streptomyces sp. SirexAA-E chromosome, complete genomeintegrase family protein3e-1273.2
NC_008346:2579756:259159725915972592514918Syntrophomonas wolfei subsp. wolfei str. Goettingen, completephage integrase3e-1273.2
NC_016048:184500:2259682259682271161149Oscillibacter valericigenes Sjm18-20, complete genomeputative site-specific recombinase5e-1272.4
NC_015275:1034230:1035408103540810366311224Clostridium lentocellum DSM 5427 chromosome, complete genomeintegrase family protein1e-1171.2
NC_016111:2952338:2969010296901029706261617Streptomyces cattleya NRRL 8057, complete genomeIntegrase1e-1170.9
NC_013757:3100515:3113794311379431149271134Geodermatophilus obscurus DSM 43160, complete genomeintegrase family protein2e-1170.1
NC_015953:1860946:1866376186637618676831308Streptomyces sp. SirexAA-E chromosome, complete genomeintegrase family protein2e-1170.1
NC_011959:131800:133752133752134702951Thermomicrobium roseum DSM 5159, complete genometransposase3e-1169.7
NC_013947:460398:4655954655954670581464Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeintegrase family protein5e-1168.9
NC_014830:335380:370079370079370543465Intrasporangium calvum DSM 43043 chromosome, complete genome9e-1168.2
NC_017955:693303:7105207105207117371218Modestobacter marinus, complete genomeintegrase2e-1067.4
NC_016114:4210173:4236833423683342379811149Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeintegrase2e-1067.4
NC_014391:16188:1618816188173391152Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeintegrase family protein2e-1067.4
NC_016884:1201868:1206857120685712080291173Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeintegrase family protein3e-1066.6
NC_015757:2459424:2470235247023524714071173Sulfobacillus acidophilus TPY chromosome, complete genomePhage integrase3e-1066.6
NC_015573:1573621:1574928157492815760401113Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeintegrase family protein3e-1066.6
NC_004193:119737:1607161607161618941179Oceanobacillus iheyensis HTE831, complete genomeintegrase4e-1066.2
NC_003888:3602753:3602753360275336039071155Streptomyces coelicolor A3(2), complete genomeintegrase1e-0964.7
NC_014974:404015:4125354125354137101176Thermus scotoductus SA-01 chromosome, complete genomeDNA integration/recombination/inversion protein1e-0964.7
NC_015953:3227000:3248249324824932499101662Streptomyces sp. SirexAA-E chromosome, complete genomeintegrase family protein1e-0964.7
NC_000964:521975:5290665290665301721107Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein1e-0964.7
NC_014828:501342:4999584999585013701413Ethanoligenens harbinense YUAN-3 chromosome, complete genometranscriptional regulator, XRE family3e-0963.2
NC_016048:2873669:2906496290649629076981203Oscillibacter valericigenes Sjm18-20, complete genomeputative site-specific recombinase5e-0962.4
NC_015434:2375439:238851623885162388890375Verrucosispora maris AB-18-032 chromosome, complete genomegp41 protein7e-0962
NC_009253:3017280:3019218301921830203211104Desulfotomaculum reducens MI-1 chromosome, complete genomephage integrase family protein6e-0962
NC_019842:484933:490677490677491516840Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,phage integrase6e-0962
NC_008595:2252830:2270402227040222716101209Mycobacterium avium 104, complete genomephage-related integrase1e-0861.2
NC_012526:1345597:1347212134721213483751164Deinococcus deserti VCD115, complete genomeputative phage integrase2e-0860.8
NC_015656:5084767:5088729508872950899701242Frankia symbiont of Datisca glomerata chromosome, complete genomeintegrase family protein2e-0860.5
NC_016048:3667890:3691910369191036930701161Oscillibacter valericigenes Sjm18-20, complete genomeputative site-specific recombinase4e-0859.7
NC_013929:3986272:3990747399074739919641218Streptomyces scabiei 87.22 chromosome, complete genomeintegrase3e-0859.7
NC_017955:2494640:2529517252951725307191203Modestobacter marinus, complete genomeintegrase3e-0859.7
NC_017179:1683199:1683199168319916843291131Clostridium difficile BI1, complete genomeprophage lambdaba04, site-specific recombinase, phage integrase family protein3e-0859.7
NC_013929:6251989:6271489627148962727271239Streptomyces scabiei 87.22 chromosome, complete genomeintegrase4e-0859.3
NC_020291:3973084:3976101397610139772791179Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometyrosine recombinase XerC-like protein5e-0859.3
NC_018524:557666:5755725755725770651494Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomephage integrase family protein5e-0858.9
NC_009253:529494:5351385351385362891152Desulfotomaculum reducens MI-1 chromosome, complete genomephage integrase family protein6e-0858.9
NC_013235:593289:599324599324600052729Nakamurella multipartita DSM 44233, complete genome8e-0858.5
NC_018704:176088:1894101894101905701161Amphibacillus xylanus NBRC 15112, complete genomeputative integrase8e-0858.5
NC_016048:3261166:3281077328107732822851209Oscillibacter valericigenes Sjm18-20, complete genomeputative site-specific recombinase1e-0757.8
NC_009077:4671417:4676733467673346780071275Mycobacterium sp. JLS, complete genomephage integrase family protein2e-0757.4
NC_014624:370030:3768543768543779331080Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein2e-0757.4
NC_016114:648422:6659876659876676331647Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeintegrase2e-0757.4
NC_015580:141379:1621711621711633671197Novosphingobium sp. PP1Y, complete genomephage integrase2e-0757
NC_009785:387910:3914763914763926301155Streptococcus gordonii str. Challis substr. CH1, complete genomesite-specific recombinase, phage integrase family2e-0757
NC_019904:5308998:531160153116015312527927Echinicola vietnamensis DSM 17526 chromosome, complete genomesite-specific recombinase XerD2e-0757
NC_014624:1010193:1013752101375210149901239Eubacterium limosum KIST612 chromosome, complete genomeintegrase4e-0756.2
NC_014815:6779538:6798594679859467998261233Micromonospora sp. L5 chromosome, complete genomeintegrase family protein4e-0756.2
NC_014831:8965:1493814938160471110Thermaerobacter marianensis DSM 12885 chromosome, complete genomeintegrase family protein4e-0756.2
NC_015312:5579078:5594921559492155961471227Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeintegrase family protein3e-0756.2
NC_008278:1845000:186443218644321864845414Frankia alni ACN14a, complete genomePutative integrase (partial)6e-0755.5
NC_020410:1684192:169160116916011692218618Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete6e-0755.5
NC_013595:41245:491474914749668522Streptosporangium roseum DSM 43021, complete genome7e-0755.5
NC_014721:729942:7313247313247325021179Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeintegrase family protein7e-0755.1
NC_006322:1415863:1422600142260014237391140Bacillus licheniformis ATCC 14580, complete genomehypothetical protein1e-0654.7
NC_006270:1415001:1421737142173714228761140Bacillus licheniformis ATCC 14580, complete genomeLambda integrase-like protein(phage related)1e-0654.7
NC_014721:2201790:2230397223039722315211125Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeintegrase family protein1e-0654.7
NC_015737:2691246:2720265272026527213951131Clostridium sp. SY8519, complete genomehypothetical protein1e-0654.3
NC_019673:8348604:836580883658088366806999Saccharothrix espanaensis DSM 44229 complete genomePhage integrase1e-0654.3
NC_016935:1636278:1644157164415716453111155Paenibacillus mucilaginosus 3016 chromosome, complete genometyrosine recombinase XerC1e-0654.3
NC_019842:1172944:1172944117294411741731230Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,DNA integration/recombination/inversion protein2e-0653.9
NC_015428:21724:2405824058252091152Lactobacillus buchneri NRRL B-30929 chromosome, complete genomeintegrase family protein3e-0653.5
NC_016109:4199839:422407042240704224405336Kitasatospora setae KM-6054, complete genomehypothetical protein3e-0653.5
NC_015656:1592021:159641615964161596859444Frankia symbiont of Datisca glomerata chromosome, complete genome2e-0653.5
NC_014210:4122514:4126849412684941283271479Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,integrase family protein2e-0653.5
NC_010397:1751067:1754551175455117558011251Mycobacterium abscessus chromosome Chromosome, complete sequencePutative phage integrase2e-0653.5
NC_008699:1132790:1159085115908511602361152Nocardioides sp. JS614, complete genomephage integrase family protein3e-0653.1
NC_017186:7822448:7830864783086478325011638Amycolatopsis mediterranei S699 chromosome, complete genomeintegrase family protein4e-0652.8
NC_014318:7821227:7830818783081878324551638Amycolatopsis mediterranei U32 chromosome, complete genomeintegrase family protein4e-0652.8
NC_009142:267550:2744052744052757241320Saccharopolyspora erythraea NRRL 2338, complete genomeintegrase (recombinase)4e-0652.8
NC_013766:679906:688425688425689369945Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein5e-0652.8
NC_009921:8147947:8161443816144381634131971Frankia sp. EAN1pec, complete genomeintegrase family protein7e-0652
NC_007722:168937:175211175211176203993Erythrobacter litoralis HTCC2594, complete genomesite-specific recombinase, phage integrase family protein7e-0652
NC_014554:1821320:1838281183828118394441164Lactobacillus plantarum subsp. plantarum ST-III chromosome,prophage Lp2 protein 2, integrase6e-0652
NC_003212:2413824:243373324337332434677945Listeria innocua Clip11262, complete genomehypothetical protein8e-0651.6
NC_008555:1204000:121282412128241213768945Listeria welshimeri serovar 6b str. SLCC5334, complete genomephage integrase, putative8e-0651.6
NC_013768:1260317:126495112649511265895945Listeria monocytogenes 08-5923, complete genomehypothetical protein9e-0651.6
NC_013766:1293144:129824712982471299191945Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein9e-0651.6