Pre_GI: BLASTP Hits

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Query: NC_008593:841291:850974 Clostridium novyi NT, complete genome

Start: 850974, End: 851975, Length: 1002

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:906969:9165789165789175791002Clostridium botulinum BKT015925 chromosome, complete genomeATP synthase (C/AC39) subunit1e-137489
NC_010674:2930259:2939551293955129405521002Clostridium botulinum B str. Eklund 17B, complete genomeATP synthase (C/AC39) subunit2e-100365
NC_010723:2735196:2743864274386427448651002Clostridium botulinum E3 str. Alaska E43, complete genomeATP synthase (C/AC39) subunit6e-100364
NC_009697:2680607:2689665268966526906661002Clostridium botulinum A str. ATCC 19397 chromosome, completeV-type ATP synthase subunit C5e-97354
NC_012563:2979147:2990817299081729918181002Clostridium botulinum A2 str. Kyoto, complete genomeV-type ATPase, C subunit5e-95347
NC_008262:1795914:1801899180189918029061008Clostridium perfringens SM101, complete genomeV-type ATPase, C subunit2e-89329
NC_003366:1901898:1912538191253819135451008Clostridium perfringens str. 13, complete genomeATP synthase subunit C3e-89328
NC_008261:2117207:2127848212784821288551008Clostridium perfringens ATCC 13124, complete genomeV-type ATPase, C subunit2e-89328
NC_013192:815854:825787825787826785999Leptotrichia buccalis DSM 1135, complete genomeH(+)-transporting two-sector ATPase4e-70265
NC_014377:2033781:2056069205606920570731005Thermosediminibacter oceani DSM 16646 chromosome, complete genomeH+transporting two-sector ATPase C (AC39) subunit2e-63243
NC_014209:2257316:2269300226930022703041005Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,H+transporting two-sector ATPase C (AC39) subunit2e-58226
NC_013921:2375900:2387882238788223888861005Thermoanaerobacter italicus Ab9 chromosome, complete genomeH+transporting two-sector ATPase C (AC39) subunit4e-58225
NC_014964:2301835:2312457231245723134611005Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeH+transporting two-sector ATPase C (AC39) subunit4e-58225
NC_010321:2319820:2330442233044223314461005Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeV-type ATP synthase subunit C4e-58225
NC_010320:2397395:2409694240969424106981005Thermoanaerobacter sp. X514 chromosome, complete genomeV-type ATP synthase subunit C8e-58224
NC_014538:2396559:2408858240885824098621005Thermoanaerobacter sp. X513 chromosome, complete genomeH+transporting two-sector ATPase C (AC39) subunit8e-58224
NC_017179:3222015:323163332316333232610978Clostridium difficile BI1, complete genomeV-type ATP synthase subunit C1e-55217
NC_013315:3214063:322368132236813224658978Clostridium difficile CD196 chromosome, complete genomeV-type ATP synthase subunit C1e-55217
NC_016148:1021138:1021138102113810221511014Thermovirga lienii DSM 17291 chromosome, complete genomeH+transporting two-sector ATPase C (AC39) subunit2e-37156
NC_009785:130252:1371111371111381241014Streptococcus gordonii str. Challis substr. CH1, complete genomeATP synthase (C/AC39) subunit3e-31135
NC_014122:393856:4043954043954055401146Methanocaldococcus infernus ME chromosome, complete genomeATP synthase A1, C subunit8e-30131
NC_013156:431795:4406204406204418191200Methanocaldococcus fervens AG86, complete genomeATP synthase A1, C subunit4e-26119
NC_013407:1610221:1617223161722316184221200Methanocaldococcus vulcanius M7, complete genomeATP synthase A1, C subunit3e-26119
NC_000909:201000:2093152093152105141200Methanocaldococcus jannaschii DSM 2661, complete genomeV-type ATP synthase subunit C2e-26119
NC_015562:627000:6351986351986363641167Methanotorris igneus Kol 5 chromosome, complete genomeV-type ATP synthase subunit C8e-26117
NC_009635:61344:6959969599707501152Methanococcus aeolicus Nankai-3 chromosome, complete genomeV-type ATP synthase subunit C4e-24112
NC_009634:411599:4214914214914226631173Methanococcus vannielii SB chromosome, complete genomeV-type ATP synthase subunit C1e-23110
NC_015847:1119666:1129331112933111305061176Methanococcus maripaludis XI chromosome, complete genomeV-type ATP synthase subunit C2e-23109
NC_009637:302881:3124033124033135781176Methanococcus maripaludis C7 chromosome, complete genomeV-type ATP synthase subunit C5e-23108
NC_005791:1028500:1035217103521710363921176Methanococcus maripaludis S2, complete genomeV-type ATP synthase subunit C4e-23108
NC_009975:1500978:1510213151021315113881176Methanococcus maripaludis C6, complete genomeATP synthase A1, C subunit8e-23107
NC_009135:494949:5047695047695059441176Methanococcus maripaludis C5, complete genomeH+-transporting two-sector ATPase, C (AC39) subunit1e-22107
NC_015636:1477221:1487791148779114888761086Methanothermococcus okinawensis IH1 chromosome, complete genomeV-type ATP synthase subunit C1e-22107
NC_014507:245344:2459382459382469961059Methanoplanus petrolearius DSM 11571 chromosome, complete genomeATP synthase A1 subunit C1e-1687
NC_014222:186876:1951521951521963181167Methanococcus voltae A3 chromosome, complete genomeATP synthase A1, C subunit4e-1685.9
NC_015216:405657:4132334132334143901158Methanobacterium sp. AL-21 chromosome, complete genomeV-type ATP synthase subunit C4e-1375.9
NC_007681:1300068:1309350130935013105071158Methanosphaera stadtmanae DSM 3091, complete genomeAhaC1e-1170.9
NC_015574:2057602:2067410206741020685671158Methanobacterium sp. SWAN-1 chromosome, complete genomeV-type ATP synthase subunit C1e-1170.5
NC_000868:1730820:1742727174272717438391113Pyrococcus abyssi GE5, complete genomeV-type ATP synthase subunit C4e-1168.9
NC_019977:828427:8502258502258513041080Methanomethylovorans hollandica DSM 15978, complete genomeATP synthase A1, C subunit7e-1168.6
NC_013741:1390823:1398243139824313992651023Archaeoglobus profundus DSM 5631, complete genomeATP synthase A1, C subunit1e-0861.2
NC_005877:509877:5218385218385228841047Picrophilus torridus DSM 9790, complete genomeV-type ATP synthase subunit C6e-0858.5
NC_012804:141914:1408171408171419171101Thermococcus gammatolerans EJ3, complete genomeArchaeal/vacuolar-type H+ ATPase, subunit C (atpC)6e-0858.5
NC_003413:181525:1892171892171903291113Pyrococcus furiosus DSM 3638, complete genomeV-type ATP synthase subunit C3e-0756.6
NC_002689:46243:5054850548516181071Thermoplasma volcanium GSS1, complete genomeV-type ATP synthase subunit C7e-0755.1
NC_012883:1603744:1615303161530316164121110Thermococcus sibiricus MM 739, complete genomeA1A0 ATP synthase, subunit C5e-0652