Pre_GI: BLASTP Hits

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Query: NC_008593:841291:849827 Clostridium novyi NT, complete genome

Start: 849827, End: 850327, Length: 501

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:906969:915445915445915945501Clostridium botulinum BKT015925 chromosome, complete genomeV-type ATPase, K subunit6e-61233
NC_009697:2680607:269131926913192691795477Clostridium botulinum A str. ATCC 19397 chromosome, completeV-type ATP synthase subunit K9e-39159
NC_012563:2979147:299247129924712992947477Clostridium botulinum A2 str. Kyoto, complete genomeV-type ATPase, K subunit2e-38157
NC_008262:1795914:180354318035431804037495Clostridium perfringens SM101, complete genomeV-type ATPase, K subunit4e-34144
NC_008261:2117207:212949521294952129989495Clostridium perfringens ATCC 13124, complete genomeV-type ATPase, K subunit4e-34144
NC_003366:1901898:191418519141851914679495Clostridium perfringens str. 13, complete genomeATP synthase subunit K4e-34144
NC_013192:815854:824622824622825095474Leptotrichia buccalis DSM 1135, complete genomeH+transporting two-sector ATPase C subunit5e-31133
NC_010674:2930259:294119029411902941675486Clostridium botulinum B str. Eklund 17B, complete genomeV-type ATPase, K subunit2e-29128
NC_010723:2735196:274550327455032745988486Clostridium botulinum E3 str. Alaska E43, complete genomeV-type ATPase, K subunit2e-29128
NC_014538:2396559:241048324104832410965483Thermoanaerobacter sp. X513 chromosome, complete genomeH+transporting two-sector ATPase subunit C2e-28125
NC_014964:2301835:231408223140822314564483Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeH+transporting two-sector ATPase subunit C4e-28124
NC_014209:2257316:227092522709252271407483Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,H+transporting two-sector ATPase C subunit4e-28124
NC_013921:2375900:238950723895072389989483Thermoanaerobacter italicus Ab9 chromosome, complete genomeH+transporting two-sector ATPase C subunit4e-28124
NC_010321:2319820:233206723320672332549483Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeV-type ATP synthase subunit K4e-28124
NC_010320:2397395:241131924113192411864546Thermoanaerobacter sp. X514 chromosome, complete genomeV-type ATP synthase subunit K4e-28124
NC_009785:130252:136020136020136499480Streptococcus gordonii str. Challis substr. CH1, complete genomev-type sodium ATP synthase, chain K6e-26116
NC_017179:3222015:323324032332403233731492Clostridium difficile BI1, complete genomeV-type ATP synthase subunit K9e-24109
NC_013315:3214063:322528832252883225779492Clostridium difficile CD196 chromosome, complete genomeV-type ATP synthase subunit K9e-24109
NC_014122:393856:403092403092403745654Methanocaldococcus infernus ME chromosome, complete genomeH(+)-transporting two-sector ATPase2e-1168.6
NC_015562:627000:633747633747634415669Methanotorris igneus Kol 5 chromosome, complete genomeATP synthase subunit c1e-1066.2
NC_015636:1477221:148960014896001490268669Methanothermococcus okinawensis IH1 chromosome, complete genomeATP synthase subunit c2e-1064.7
NC_013156:431795:439273439273439929657Methanocaldococcus fervens AG86, complete genomeH(+)-transporting two-sector ATPase4e-1064.3
NC_015847:1119666:112798011279801128648669Methanococcus maripaludis XI chromosome, complete genomeV-type ATP synthase subunit K3e-1064.3
NC_009975:1500978:151207215120721512740669Methanococcus maripaludis C6, complete genomeH+transporting two-sector ATPase C subunit3e-1064.3
NC_005791:1028500:103386610338661034534669Methanococcus maripaludis S2, complete genomeATP synthase subunit K3e-1064.3
NC_009135:494949:506628506628507296669Methanococcus maripaludis C5, complete genomeH+-transporting two-sector ATPase, C subunit3e-1064.3
NC_009637:302881:311052311052311720669Methanococcus maripaludis C7 chromosome, complete genomeV-type ATP synthase subunit K3e-1064.3
NC_013407:1610221:161921816192181619880663Methanocaldococcus vulcanius M7, complete genomeH(+)-transporting two-sector ATPase4e-1063.9
NC_000909:201000:211295211295211957663Methanocaldococcus jannaschii DSM 2661, complete genomeATP synthase subunit K5e-1063.9
NC_009635:61344:681896818968860672Methanococcus aeolicus Nankai-3 chromosome, complete genomeV-type ATP synthase subunit K1e-0962.4
NC_013926:1205443:1213265121326512150851821Aciduliprofundum boonei T469 chromosome, complete genomeH(+)-transporting two-sector ATPase1e-0859.3
NC_009634:411599:420144420144420812669Methanococcus vannielii SB chromosome, complete genomeV-type ATP synthase subunit K1e-0858.9
NC_014222:186876:193488193488194159672Methanococcus voltae A3 chromosome, complete genomeH(+)-transporting two-sector ATPase3e-0754.7
NC_012883:1603744:161706516170651617550486Thermococcus sibiricus MM 739, complete genomeA1A0 ATP synthase, subunit c4e-0754.3
NC_015216:405657:412106412106412594489Methanobacterium sp. AL-21 chromosome, complete genomeATP synthase subunit c1e-0652.8
NC_003413:181525:188100188100188579480Pyrococcus furiosus DSM 3638, complete genomeATP synthase subunit K4e-0650.8
NC_017243:3141500:314788831478883148355468Brachyspira intermedia PWS/A chromosome, complete genomeV-type ATP synthase subunit K4e-0650.4
NC_012225:2198987:221047022104702210937468Brachyspira hyodysenteriae WA1, complete genomeV-type ATP synthase subunit K4e-0650.4
NC_007681:1300068:131120813112081311696489Methanosphaera stadtmanae DSM 3091, complete genomeAhaK6e-0650.4
NC_019908:2068631:207982420798242080291468Brachyspira pilosicoli P43/6/78 chromosome, complete genomeV-type ATP synthase subunit K1e-0549.7
NC_014330:1113145:113703911370391137506468Brachyspira pilosicoli 95/1000 chromosome, complete genomeV-type ATP synthase subunit K1e-0549.7
NC_018604:2579000:261838726183872618854468Brachyspira pilosicoli WesB complete genomeV-type ATP synthase subunit K1e-0549.7
NC_018607:290500:304112304112304579468Brachyspira pilosicoli B2904 chromosome, complete genomeV-type ATP synthase subunit K1e-0549.7