Pre_GI: BLASTP Hits

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Query: NC_008593:1797000:1800154 Clostridium novyi NT, complete genome

Start: 1800154, End: 1801527, Length: 1374

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004557:2677155:2685673268567326870311359Clostridium tetani E88, complete genomeNa+/H+ antiporter5e-161567
NC_003454:2080705:2082039208203920833761338Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeNA+/H+ antiporter NHAC1e-126453
NC_012658:1617902:1622342162234216237391398Clostridium botulinum Ba4 str. 657 chromosome, complete genomeNa+/H+ antiporter family protein1e-126453
NC_013171:1677543:1700217170021717015211305Anaerococcus prevotii DSM 20548, complete genomeNa+/H+ antiporter NhaC2e-106386
NC_014377:1512217:1534279153427915355741296Thermosediminibacter oceani DSM 16646 chromosome, complete genomeputative methionine transporter, NhaC family (TC 2.A.35.1.-)4e-104378
NC_015519:924000:9347329347329360271296Tepidanaerobacter sp. Re1 chromosome, complete genomeNa+/H+ antiporter NhaC-like protein3e-102372
NC_009092:3783000:3783257378325737845881332Shewanella loihica PV-4, complete genomeNa+/H+ antiporter NhaC7e-86318
NC_015425:405058:4176384176384189721335Clostridium botulinum BKT015925 chromosome, complete genomeNa+/H+ antiporter family protein1e-83310
NC_007645:1698803:1720380172038017216991320Hahella chejuensis KCTC 2396, complete genomeNa+/H+ antiporter9e-78291
NC_016446:979884:9825239825239838661344Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein2e-75283
NC_012667:46432:6250062500638431344Vibrio cholerae MJ-1236 chromosome 2, complete genomemethionine transporter MetT2e-75283
NC_012580:207025:2096762096762110191344Vibrio cholerae M66-2 chromosome II, complete sequenceNa+/H+ antiporter2e-75283
NC_002506:207097:2097482097482110911344Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completeNa+/H+ antiporter, putative2e-75283
NC_016945:207089:2097282097282110711344Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein2e-75283
NC_015497:3497680:3516919351691935182501332Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeNa+/H+ antiporter NhaC-like protein2e-73276
NC_008260:3053775:3058906305890630602521347Alcanivorax borkumensis SK2, complete genomeNa+/H+ antiporter, putative4e-70265
NC_009615:711125:7175017175017187961296Parabacteroides distasonis ATCC 8503 chromosome, complete genomeNa+/H+ antiporter2e-68260
NC_015164:1158796:1163208116320811645121305Bacteroides salanitronis DSM 18170 chromosome, complete genomeNa+/H+ antiporter NhaC5e-68258
NC_020272:3396800:3398220339822033995091290Bacillus amyloliquefaciens IT-45, complete genomeNa(+)/H(+) antiporter nhaC Sodium/proton antiporter9e-68258
NC_020410:495184:5355525355525368411290Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative Na+/H+ antiporter2e-67256
NC_019842:484933:5400765400765413651290Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,Malate-2H(+)/Na(+)-lactate antiporter3e-66253
UCMB5137:2054735:2076859207685920781481290Bacillus atrophaeus UCMB-5137putative Na+/H+ antiporter3e-61236
NC_013204:929434:9532219532219545551335Eggerthella lenta DSM 2243, complete genomeNa+/H+ antiporter NhaC9e-61234
NC_013410:1152188:1169512116951211708551344Fibrobacter succinogenes subsp. succinogenes S85 chromosome,Na+/H+ antiporter NhaC-like protein4e-60232
NC_017347:2437902:2444305244430524456181314Staphylococcus aureus subsp. aureus T0131 chromosome, completeNa+/H+ antiporter family protein8e-60231
NC_014364:2562281:2573010257301025743441335Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeNa+/H+ antiporter NhaC4e-53209
NC_007963:3574000:3577282357728235788351554Chromohalobacter salexigens DSM 3043, complete genomeNa+/H+ antiporter NhaC3e-0860.5
NC_003454:339345:3499903499903515671578Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeNA+/H+ antiporter NHAC1e-0655.1