Pre_GI: BLASTP Hits

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Query: NC_008380:855246:869484 Rhizobium leguminosarum bv. viciae 3841, complete genome

Start: 869484, End: 870305, Length: 822

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This biovar nodulates legumes in the Tribe Viciae (Vicia, Pisum, Lathyrus, Lens). This strain is a spontaneous streptomycin-resistant mutant of strain 300. Nitrogen-fixing plant symbiont. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009719:3532587:355131635513163552140825Parvibaculum lavamentivorans DS-1 chromosome, complete genomephytanoyl-CoA dioxygenase5e-63241
NC_014539:860402:866254866254867072819Burkholderia sp. CCGE1003 chromosome 1, complete sequencePhytanoyl-CoA dioxygenase5e-47187
NC_010622:2576110:258842825884282589261834Burkholderia phymatum STM815 chromosome 1, complete sequencePhytanoyl-CoA dioxygenase7e-47187
NC_010612:2777687:278257227825722783393822Mycobacterium marinum M, complete genomehypothetical protein2e-1789.7
NC_019950:1689910:169523216952321696053822Mycobacterium canettii CIPT 140060008 complete genomehypothetical protein2e-1789.7
NC_008769:1709078:171696317169631717784822Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomehypothetical protein5e-1788.2
NC_012207:1681971:168985616898561690677822Mycobacterium bovis BCG str. Tokyo 172, complete genomehypothetical protein5e-1788.2
NC_002755:1684161:169204616920461692867822Mycobacterium tuberculosis CDC1551, complete genomemmcH protein, putative5e-1788.2
NC_002945:1680751:168863616886361689457822Mycobacterium bovis AF2122/97, complete genomehypothetical protein5e-1788.2
NC_015848:1708176:171606117160611716882822Mycobacterium canettii CIPT 140010059, complete genomehypothetical protein5e-1788.2
NC_009525:1685522:169340716934071694228822Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein5e-1788.2
NC_000962:1684005:169189016918901692711822Mycobacterium tuberculosis H37Rv, complete genomehypothetical protein5e-1788.2
NC_012943:2707677:272075527207552721576822Mycobacterium tuberculosis KZN 1435 chromosome, complete genomehypothetical protein5e-1788.2
NC_016768:2704350:271742827174282718249822Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein5e-1788.2
NC_016804:1679357:168724216872421688063822Mycobacterium bovis BCG str. Mexico chromosome, complete genomehypothetical protein5e-1788.2
NC_017026:1686500:169290616929061693727822Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein5e-1788.2
NC_009565:1688642:169652716965271697348822Mycobacterium tuberculosis F11, complete genomehypothetical protein3e-1685.9
NC_017904:4203257:420854942085494209412864Mycobacterium sp. MOTT36Y chromosome, complete genomephytanoyl-CoA dioxygenase (PhyH) family protein3e-0962.4
NC_011770:3396637:340830234083023409174873Pseudomonas aeruginosa LESB58, complete genomehypothetical protein1e-0860.5
NC_012522:3224526:324844832484483249311864Rhodococcus opacus B4, complete genomehypothetical protein2e-0859.7