Pre_GI: BLASTP Hits

Some Help

Query: NC_008269:667228:685462 Rhodococcus sp. RHA1 plasmid pRHL1, complete sequence

Start: 685462, End: 685803, Length: 342

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013093:6511108:652435465243546524653300Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, ArsR family1e-1685.1
NC_010184:4532262:453226245322624532585324Bacillus weihenstephanensis KBAB4, complete genometranscriptional regulator, ArsR family8e-1682.4
NC_012982:2415237:241989324198932420261369Hirschia baltica ATCC 49814, complete genometranscriptional regulator, ArsR family2e-1581.3
NC_004722:4645678:464714546471454647468324Bacillus cereus ATCC 14579, complete genomeTranscriptional regulator, ArsR family4e-1580.1
NC_005957:4502733:450273345027334503056324Bacillus thuringiensis serovar konkukian str. 97-27, completetranscriptional regulator, ArsR family4e-1580.1
NC_003909:4484278:448574744857474486070324Bacillus cereus ATCC 10987, complete genometranscriptional regulator, ArsR family4e-1580.1
NC_011725:4671432:467143246714324671755324Bacillus cereus B4264 chromosome, complete genomeArsR family transcriptional regulator4e-1580.1
NC_011773:4569600:457104145710414571364324Bacillus cereus AH820 chromosome, complete genomeArsR family transcriptional regulator4e-1580.1
NC_014171:4560061:456152745615274561850324Bacillus thuringiensis BMB171 chromosome, complete genomeArsR family transcriptional regulator4e-1580.1
NC_016771:4445815:444581544458154446138324Bacillus cereus NC7401, complete genomeArsR family transcriptional regulator4e-1580.1
NC_005945:4508304:450830445083044508627324Bacillus anthracis str. Sterne, complete genometranscriptional regulator, ArsR family5e-1579.7
NC_007530:4507742:450774245077424508065324Bacillus anthracis str. 'Ames Ancestor', complete genometranscriptional regulator, arsr family5e-1579.7
NC_016935:3819500:384403838440383844367330Paenibacillus mucilaginosus 3016 chromosome, complete genomeputative transcriptional regulator6e-1579.3
NC_014623:1600360:162137116213711621697327Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeArsR family transcriptional regulator7e-1579.3
NC_008711:1224164:123127212312721231775504Arthrobacter aurescens TC1, complete genomeputative transcriptional regulator, ArsR family3e-1477.4
NC_015434:2657781:267100926710092671416408Verrucosispora maris AB-18-032 chromosome, complete genomeArsR family transcriptional regulator3e-1477.4
NC_013093:7437033:744726174472617447623363Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, ArsR family2e-1477.4
NC_013730:3695674:370326837032683703588321Spirosoma linguale DSM 74, complete genometranscriptional regulator, ArsR family5e-1476.3
NC_002944:1781905:179441717944171794740324Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein6e-1476.3
NC_013061:2775623:278569827856982786018321Pedobacter heparinus DSM 2366, complete genomeregulatory protein ArsR6e-1475.9
NC_014206:411143:424901424901425221321Geobacillus sp. C56-T3 chromosome, complete genomeArsR family transcriptional regulator8e-1475.9
NC_014814:2588628:264082526408252641145321Mycobacterium sp. Spyr1 chromosome, complete genometranscriptional regulator, ArsR family1e-1375.1
NC_003063:2059311:206688420668842067240357Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein1e-1375.1
NC_014655:424486:453724453724454044321Leadbetterella byssophila DSM 17132 chromosome, complete genometranscriptional regulator, arsr family1e-1375.1
NC_003305:1:751675167857342Agrobacterium tumefaciens str. C58 chromosome linear, completetranscriptional regulator, ArsR family2e-1374.7
NC_009338:3410349:342899634289963429385390Mycobacterium gilvum PYR-GCK chromosome, complete genomeregulatory protein ArsR2e-1374.7
NC_008686:1180388:118452011845201184873354Paracoccus denitrificans PD1222 chromosome 1, complete sequenceregulatory protein, ArsR3e-1373.9
NC_016609:4331359:434919443491944349571378Niastella koreensis GR20-10 chromosome, complete genomeregulatory protein ArsR4e-1373.6
NC_014623:7720828:773136377313637731692330Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeArsR family transcriptional regulator6e-1372.8
NC_012489:3425416:344471934447193445081363Gemmatimonas aurantiaca T-27, complete genomeArsR family transcriptional regulator7e-1372.4
NC_005042:1422000:143704014370401437351312Prochlorococcus marinus subsp. marinus str. CCMP1375, completeTranscriptional regulator9e-1372.4
NC_009953:2342500:234251923425192342908390Salinispora arenicola CNS-205 chromosome, complete genomeArsR family transcriptional regulator1e-1271.6
NC_009380:2310000:231986123198612320295435Salinispora tropica CNB-440 chromosome, complete genomeregulatory protein ArsR3e-1270.5
NC_007510:1959883:200663720066372007050414Burkholderia sp. 383 chromosome 1, complete sequencetranscriptional regulator, ArsR family8e-1268.9
NC_017030:4146937:415196941519694152298330Corallococcus coralloides DSM 2259 chromosome, complete genomeArsR family transcriptional regulator8e-1268.9
NC_016646:275818:281132281132281482351Pseudovibrio sp. FO-BEG1 plasmid unnamed, complete sequenceregulatory protein ArsR1e-1168.9
NC_012522:4299287:431653443165344316848315Rhodococcus opacus B4, complete genomeputative ArsR family transcriptional regulator1e-1168.6
NC_010337:2950500:296767029676702967942273Heliobacterium modesticaldum Ice1, complete genometranscriptional regulator, arsr family2e-1167.8
NC_013205:2610956:261095626109562611678723Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,Activator of Hsp90 ATPase 1 family protein2e-1167.8
NC_010995:4460413:448074644807464481090345Cellvibrio japonicus Ueda107, complete genometranscriptional regulatory protein3e-1167.4
NC_015703:5865921:587364858736485873965318Runella slithyformis DSM 19594 chromosome, complete genomeregulatory protein ArsR3e-1167
NC_013131:3222500:322341432234143224406993Catenulispora acidiphila DSM 44928, complete genometranscriptional regulator, ArsR family4e-1167
NC_013411:3010000:302886530288653029149285Geobacillus sp. Y412MC61, complete genometranscriptional regulator, ArsR family4e-1166.6
NC_014915:2149884:216879721687972169081285Geobacillus sp. Y412MC52 chromosome, complete genometranscriptional regulator, ArsR family4e-1166.6
NC_014831:2082304:208955120895512089868318Thermaerobacter marianensis DSM 12885 chromosome, complete genometranscriptional regulator, ArsR family5e-1166.2
NC_016024:1185388:120264112026411202991351Candidatus Chloracidobacterium thermophilum B chromosome chromosomeArsR family transcriptional regulator3e-1063.5
NC_012669:4118230:412085741208574121192336Beutenbergia cavernae DSM 12333, complete genometranscriptional regulator, ArsR family4e-1063.5
NC_017030:9028412:903202090320209032400381Corallococcus coralloides DSM 2259 chromosome, complete genomeArsR family transcriptional regulator2e-0961.2
NC_013510:856997:862210862210863013804Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, ArsR family2e-0960.8
NC_013730:2751484:277968527796852779984300Spirosoma linguale DSM 74, complete genometranscriptional regulator, ArsR family3e-0960.5
NC_016791:3953972:397954939795493979866318Clostridium sp. BNL1100 chromosome, complete genomeputative transcriptional regulator6e-0959.7
NC_012780:189949:207823207823208092270Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequenceArsR family transcriptional regulator8e-0959.3
NC_018664:985689:100172510017251002003279Clostridium acidurici 9a chromosome, complete genomeArsR familiy transcriptional regulator9e-0958.9
NC_010842:425854:428813428813429157345Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosomeTranscriptional regulator, ArsR family1e-0858.5
NC_021177:7870464:787730778773077877684378Streptomyces fulvissimus DSM 40593, complete genomeTranscriptional regulator2e-0858.2
NC_017030:9465809:949426894942689494675408Corallococcus coralloides DSM 2259 chromosome, complete genomeArsR family transcriptional regulator2e-0858.2
NC_005071:1064000:107919610791961079525330Prochlorococcus marinus str. MIT 9313, complete genomeBacterial regulatory proteins, ArsR family2e-0858.2
NC_018866:154252:154252154252154554303Dehalobacter sp. DCA chromosome, complete genomeArsenical resistance operon repressor2e-0858.2
NC_010602:420284:423243423243423560318Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'ArsR family transcriptional regulator1e-0858.2
NC_015565:1163148:118595811859581186317360Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeArsR family transcriptional regulator2e-0857.8
NC_007907:4714844:473218447321844732501318Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0857.8
NC_020126:1943092:197819819781981978485288Myxococcus stipitatus DSM 14675, complete genomeArsR family transcriptional regulator2e-0857.8
NC_010003:449192:471582471582471902321Petrotoga mobilis SJ95, complete genometranscriptional regulator, ArsR family3e-0857.4
NC_018866:154252:163003163003163350348Dehalobacter sp. DCA chromosome, complete genometranscriptional regulator, ArsR family4e-0857
NC_007907:5185510:522420452242045224521318Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-0857
NC_019842:3852062:387916538791653879452288Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,transcriptional repressor sdpR4e-0856.6
NC_020410:3801583:382773038277303828017288Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completetranscriptional regulator (ArsR family)4e-0856.6
NC_017297:564727:577459577459577824366Clostridium botulinum F str. 230613 chromosome, complete genomeputative cadmium resistance transcriptional regulator CadC5e-0856.6
NC_009699:564455:577188577188577553366Clostridium botulinum F str. Langeland chromosome, complete genomecadmium resistance transcriptional regulator CadC5e-0856.6
NC_011830:1288984:131316613131661313486321Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, ArsR family5e-0856.6
UCMB5137:3601629:362861336286133628900288Bacillus atrophaeus UCMB-5137BATR1942_18235; transcriptional regulator, ArsR family protein;(location [3556487:3556775] strand -); from Bacillusatrophaeus 1942, complete genome. [6e-0856.2
NC_010516:583870:593892593892594257366Clostridium botulinum B1 str. Okra, complete genomeputative cadmium resistance transcriptional regulator CadC6e-0856.2
NC_017188:3839478:386426638642663864553288Bacillus amyloliquefaciens TA208 chromosome, complete genometranscriptional repressor sdpR9e-0855.8
NC_017191:3841170:386595838659583866245288Bacillus amyloliquefaciens XH7 chromosome, complete genomeArsR family transcriptional regulator9e-0855.8
NC_017955:1611037:162999416299941630395402Modestobacter marinus, complete genomeArsR family transcriptional regulator1e-0755.1
NC_014151:449732:451144451144451509366Cellulomonas flavigena DSM 20109 chromosome, complete genometranscriptional regulator, ArsR family2e-0754.7
NC_014377:1400544:141702714170271417401375Thermosediminibacter oceani DSM 16646 chromosome, complete genometranscriptional regulator, ArsR family2e-0754.7
NC_014377:1985714:198979219897921990124333Thermosediminibacter oceani DSM 16646 chromosome, complete genometranscriptional regulator, ArsR family2e-0754.7
NC_007907:4714844:472984247298424730195354Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0754.7
NC_003296:1696958:170103017010301701365336Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE TRANSCRIPTION REGULATOR PROTEIN2e-0754.3
NC_003296:1665569:167084016708401671175336Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE TRANSCRIPTION REGULATOR PROTEIN2e-0754.3
NC_012997:4491871:450756945075694507907339Teredinibacter turnerae T7901, complete genomeregulatory protein, ArsR3e-0753.9
NC_010816:1274702:128265012826501282964315Bifidobacterium longum DJO10A, complete genomeArsenical resistance operon repressor3e-0753.9
NC_010003:449192:452964452964453326363Petrotoga mobilis SJ95, complete genometranscriptional regulator, ArsR family3e-0753.9
NC_014150:648868:673088673088673456369Brachyspira murdochii DSM 12563 chromosome, complete genometranscriptional regulator, ArsR family3e-0753.9
NC_008820:968423:986976986976987254279Prochlorococcus marinus str. MIT 9303, complete genomebacterial regulatory proteins, ArsR family protein4e-0753.5
NC_014355:3669470:368372436837243684089366Candidatus Nitrospira defluvii, complete genomeputative ArsR family transcriptional regulator4e-0753.5
NC_009455:1025915:105354610535461053836291Dehalococcoides sp. BAV1 chromosome, complete genomeArsR family transcriptional regulator6e-0752.8
NC_016887:1680338:169785716978571698207351Nocardia cyriacigeorgica GUH-2, complete genomeputative transcriptional regulator7e-0752.8
NC_008260:2961291:298309829830982983415318Alcanivorax borkumensis SK2, complete genomeTranscriptional regulator, ArsR family, putative9e-0752.4
NC_015152:1230995:124599212459921246294303Spirochaeta sp. Buddy chromosome, complete genomeArsR family transcriptional regulator8e-0752.4
NC_014666:8016066:803248380324838032899417Frankia sp. EuI1c chromosome, complete genometranscriptional regulator, ArsR family1e-0651.6
NC_015690:3477573:351892035189203519240321Paenibacillus mucilaginosus KNP414 chromosome, complete genomeArsR family transcriptional regulator1e-0651.6
NC_011830:1288984:130901913090191309372354Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, ArsR family2e-0651.2
NC_008825:2564965:258743425874342587790357Methylibium petroleiphilum PM1, complete genometranscriptional regulator2e-0651.2
NC_011740:2859933:286778528677852868138354Escherichia fergusonii ATCC 35469, complete genomeArsenical resistance operon repressor3e-0650.8
NC_009921:1813500:183793918379391838367429Frankia sp. EAN1pec, complete genometranscriptional regulator, ArsR family3e-0650.8
NC_011083:3171171:318683831868383187260423Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,arsenical resistance operon repressor2e-0650.8
NC_015850:1947000:195001819500181950377360Acidithiobacillus caldus SM-1 chromosome, complete genomeArsR family transcriptional regulator2e-0650.8
NC_015850:548821:565588565588565947360Acidithiobacillus caldus SM-1 chromosome, complete genomeArsR family transcriptional regulator2e-0650.8
NC_013947:5682895:570717957071795707568390Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, TrmB2e-0650.8
NC_015312:4658548:467946846794684679830363Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeArsR family transcriptional regulator3e-0650.4
NC_013592:2703327:271984927198492720181333Dickeya dadantii Ech586, complete genometranscriptional regulator, ArsR family4e-0650.4
NC_012962:3933715:398134039813403982011672Photorhabdus asymbiotica, complete genomeTranscriptional regulator5e-0649.7
NC_012912:2800884:281505128150512815383333Dickeya zeae Ech1591, complete genometranscriptional regulator, ArsR family5e-0649.7
NC_007777:3824291:383444638344463834856411Frankia sp. CcI3, complete genometranscriptional regulator, ArsR family5e-0649.7
NC_007333:1743890:180610118061011806532432Thermobifida fusca YX, complete genomeregulatory protein, ArsR5e-0649.7
NC_010612:4501414:451756645175664517961396Mycobacterium marinum M, complete genometranscriptional regulatory protein (probably ArsR-family)8e-0649.3