Pre_GI: BLASTP Hits

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Query: NC_008043:615049:636897 Silicibacter sp. TM1040 mega plasmid, complete sequence

Start: 636897, End: 637490, Length: 594

Host Lineage: Ruegeria; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain was isolated from a culture of the dinoflagellate Pfiesteria piscicida CCMP1830 which has been implicated in many large scale algal blooms resulting in increased mortality in fish. The bacteria are attached to the surface of the dinoflagellate and in some ways allow the dinoflagellate to grow as those lacking the bacteria die off. The bacterium also chemotaxes towards the dinoflagellate product DMSP (dimethylsulfoniopropionate) and metabolizes it. DMSP is a major source of sulfur in marine ecosystems and plays a role in the sulfur biogeochemical cycle. The implication is a tight association between these important dinoflagellates and this marine bacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008044:1401814:1414830141483014158311002Silicibacter sp. TM1040, complete genomephage integrase1e-22106
NC_014664:3003633:3019218301921830202761059Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeintegrase family protein3e-21101
NC_008686:2417000:242338424233842424307924Paracoccus denitrificans PD1222 chromosome 1, complete sequencephage integrase family protein3e-2098.2
NC_009485:7021228:7029039702903970301871149Bradyrhizobium sp. BTAi1 chromosome, complete genomephage integrase2e-1582.4
NC_008686:2417000:242245324224532423145693Paracoccus denitrificans PD1222 chromosome 1, complete sequencephage integrase family protein5e-1580.9
NC_008260:2340824:2352446235244623535491104Alcanivorax borkumensis SK2, complete genomeshufflon-specific DNA recombinase2e-1375.1
NC_013722:3117442:3131487313148731325811095Xanthomonas albilineans, complete genomeputative shufflon-specific dna recombinase protein5e-1374.3
NC_015458:2338437:2340983234098323420711089Pusillimonas sp. T7-7 chromosome, complete genomesite-specific recombinase, phage integrase family4e-1271.2
NC_015381:429940:4389684389684400111044Burkholderia gladioli BSR3 chromosome 1, complete sequencephage integrase9e-1270.1
NC_010511:4313769:4325412432541243264611050Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein2e-1169.3
NC_008542:483761:4912204912204922631044Burkholderia cenocepacia HI2424 chromosome 1, complete sequencephage integrase family protein2e-1168.9
NC_008060:2913671:2934382293438229354251044Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencephage integrase2e-1168.9
NC_010682:3313944:3349996334999633510511056Ralstonia pickettii 12J chromosome 1, complete sequenceintegrase family protein4e-1167.8
NC_004578:568236:5847805847805860211242Pseudomonas syringae pv. tomato str. DC3000, complete genomesite-specific recombinase, phage integrase family5e-1167.4
NC_012856:3000839:3011439301143930124941056Ralstonia pickettii 12D chromosome 1, complete genomeintegrase family protein1e-1066.6
NC_009952:997950:1007057100705710081691113Dinoroseobacter shibae DFL 12, complete genomeintegrase family protein2e-1065.9
NC_009428:833701:8478178478178489051089Rhodobacter sphaeroides ATCC 17025 chromosome, complete genomephage integrase family protein5e-1064.3
NC_009428:833701:842178842178843062885Rhodobacter sphaeroides ATCC 17025 chromosome, complete genomephage integrase family protein6e-1063.9
NC_007626:959684:9702309702309713091080Magnetospirillum magneticum AMB-1, complete genomeIntegrase6e-1063.9
NC_011601:717072:7208917208917219611071Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeintegrase5e-0960.8
NC_013941:975353:9807899807899818591071Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephage integrase family7e-0960.5
NC_012967:786534:7879527879527890221071Escherichia coli B str. REL606 chromosome, complete genomeintegrase7e-0960.5
NC_007494:714525:7351117351117362321122Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequenceputative integrase1e-0859.7
NC_008554:4839116:4849957484995748512041248Syntrophobacter fumaroxidans MPOB, complete genomephage integrase family protein1e-0859.7
NC_007005:3414579:3419554341955434205881035Pseudomonas syringae pv. syringae B728a, complete genomePhage integrase:Phage integrase, N-terminal SAM-like2e-0859.3
NC_010501:4379920:4392912439291243939341023Pseudomonas putida W619, complete genomeintegrase family protein4e-0857.8
NC_013364:2898964:2916736291673629178061071Escherichia coli O111:H- str. 11128, complete genomeputative integrase5e-0857.8
NC_009049:627000:6368326368326380011170Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequencephage integrase family protein7e-0857
NC_014216:2538500:255809425580942559092999Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeintegrase family protein8e-0857
NC_011601:1039500:1043517104351710445901074Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeintegrase8e-0857
NC_014355:288000:2962442962442972841041Candidatus Nitrospira defluvii, complete genomeputative phage integrase1e-0756.2
NC_011894:6382636:6386877638687763879111035Methylobacterium nodulans ORS 2060, complete genomeintegrase family protein1e-0756.2
NC_014774:1210004:125682512568251257724900Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completeintegrase family protein1e-0756.2
NC_003295:1654000:1669739166973916708031065Ralstonia solanacearum GMI1000, complete genomePUTATIVE INTEGRASE/RECOMBINASE PROTEIN2e-0755.8
NC_000963:1024000:102592910259291026846918Rickettsia prowazekii str. Madrid E, complete genometyrosine recombinase3e-0755.1
NC_017048:225980:256351256351257268918Rickettsia prowazekii str. GvV257 chromosome, complete genomesite-specific tyrosine recombinase XerC3e-0755.1
NC_017049:1022000:102419810241981025115918Rickettsia prowazekii str. Chernikova chromosome, complete genomesite-specific tyrosine recombinase XerC3e-0755.1
NC_017050:1024000:102584810258481026765918Rickettsia prowazekii str. Katsinyian chromosome, complete genomesite-specific tyrosine recombinase XerC3e-0755.1
NC_017056:995500:102583910258391026756918Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genomesite-specific tyrosine recombinase XerC3e-0755.1
NC_017057:1024000:102650510265051027422918Rickettsia prowazekii str. RpGvF24 chromosome, complete genomesite-specific tyrosine recombinase XerC3e-0755.1
NC_010793:1811401:1846220184622018473381119Orientia tsutsugamushi str. Ikeda, complete genomeputative integrase4e-0754.3
NC_010793:30488:468754687547690816Orientia tsutsugamushi str. Ikeda, complete genomeputative integrase5e-0754.3
NC_011353:1716037:172511817251181725858741Escherichia coli O157:H7 str. EC4115 chromosome, complete genome7e-0753.9
NC_002695:1794635:180352718035271804219693Escherichia coli O157:H7 str. Sakai, complete genomeintegrase7e-0753.9
NC_013008:1715831:172409317240931724785693Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeintegrase7e-0753.9
NC_013361:1754346:176509417650941765786693Escherichia coli O26:H11 str. 11368 chromosome, complete genome7e-0753.9
NC_013941:1613595:162264716226471623387741Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeintegrase7e-0753.9
NC_009659:543000:548709548709549695987Janthinobacterium sp. Marseille chromosome, complete genomephage integrase site specific recombinase7e-0753.9
NC_007964:328825:3569203569203580891170Nitrobacter hamburgensis X14, complete genomephage integrase7e-0753.9
NC_011757:5048714:5048714504871450499311218Methylobacterium chloromethanicum CM4, complete genomeintegrase family protein7e-0753.9
NC_010508:451184:461527461527462063537Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence6e-0753.9
NC_008752:415599:431227431227432225999Acidovorax avenae subsp. citrulli AAC00-1, complete genomephage integrase family protein9e-0753.5
NC_015388:1020747:102930310293031030148846Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeintegrase family protein9e-0753.5
NC_002655:2264773:228294922829492283650702Escherichia coli O157:H7 EDL933, complete genomeputative integrase fragment8e-0753.5
NC_011601:1466496:147555814755581476250693Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome7e-0753.5
NC_012988:4633930:4641261464126146422741014Methylobacterium extorquens DM4, complete genomeintegrase7e-0753.5
NC_010793:1723365:1726048172604817272471200Orientia tsutsugamushi str. Ikeda, complete genomeputative integrase1e-0653.1
NC_015675:2567000:2571899257189925730891191Mesorhizobium opportunistum WSM2075 chromosome, complete genomeintegrase family protein1e-0653.1
NC_019973:2417000:2421910242191024231001191Mesorhizobium australicum WSM2073, complete genomesite-specific recombinase XerC1e-0653.1
NC_014923:2439197:2444746244474624459361191Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeintegrase family protein1e-0653.1
NC_020304:752012:7746467746467757581113Desulfocapsa sulfexigens DSM 10523, complete genomesite-specific recombinase XerD1e-0653.1
NC_007626:3996000:4009811400981140109021092Magnetospirillum magneticum AMB-1, complete genomeIntegrase1e-0652.8
NC_008825:564392:5822395822395832431005Methylibium petroleiphilum PM1, complete genomehypothetical protein1e-0652.8
NC_010793:1695716:1709642170964217108411200Orientia tsutsugamushi str. Ikeda, complete genomeputative integrase1e-0652.8
NC_010793:1628500:1631109163110916323081200Orientia tsutsugamushi str. Ikeda, complete genomeputative integrase1e-0652.8
NC_010172:4185904:4194558419455841955621005Methylobacterium extorquens PA1, complete genomeintegrase family protein2e-0652.4
NC_014355:243543:2579012579012590221122Candidatus Nitrospira defluvii, complete genomephage integrase2e-0652.4
NC_008751:2988235:2994488299448829957411254Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomephage integrase family protein2e-0652.4
NC_011768:5900500:5905877590587759071061230Desulfatibacillum alkenivorans AK-01, complete genomeintegrase family protein2e-0652
NC_012985:1:8544854495901047Candidatus Liberibacter asiaticus str. psy62, complete genomephage-related integrase/recombinase2e-0652
NC_016642:471656:4729034729034739491047Pseudovibrio sp. FO-BEG1 chromosome, complete genomephage integrase family2e-0652
NC_015942:403296:4146714146714157651095Acidithiobacillus ferrivorans SS3 chromosome, complete genomeintegrase family protein3e-0652
NC_012796:1600600:1605716160571616067561041Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase3e-0651.6
NC_012724:359444:3687393687393697581020Burkholderia glumae BGR1 chromosome 1, complete genomePhage-related integrase3e-0651.6
NC_018678:87064:9596595965970681104Alteromonas macleodii str. 'English Channel 673' chromosome,integrase3e-0651.6
NC_004463:925140:940715940715941704990Bradyrhizobium japonicum USDA 110, complete genomeprobable site-specific integrase/recombinase4e-0651.2
NC_007761:3047321:3051864305186430530781215Rhizobium etli CFN 42, complete genomeprobable integrase/recombinase protein5e-0650.8
NC_008314:2686851:2690066269006626911061041Ralstonia eutropha H16 chromosome 2, complete sequencephage integrase family protein6e-0650.8
NC_015731:2148517:2150716215071621518041089Nitrosomonas sp. Is79A3 chromosome, complete genomeintegrase family protein7e-0650.4
NC_020126:6791726:681055668105566811062507Myxococcus stipitatus DSM 14675, complete genomeintegrase family protein7e-0650.4
NC_014034:2253649:2253649225364922547191071Rhodobacter capsulatus SB1003 chromosome, complete genomephage integrase7e-0650.4
NC_014355:1223243:1233478123347812345481071Candidatus Nitrospira defluvii, complete genomeputative integrase8e-0650.4
NC_017033:1052000:1053148105314810541671020Frateuria aurantia DSM 6220 chromosome, complete genomesite-specific recombinase XerC8e-0650.4
NC_010511:3106418:3119432311943231204481017Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein9e-0650.1