Pre_GI: BLASTP Hits

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Query: NC_007953:504939:522440 Burkholderia xenovorans LB400 chromosome 3, complete sequence

Start: 522440, End: 524122, Length: 1683

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020126:6190662:6190662619066261923171656Myxococcus stipitatus DSM 14675, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein8e-129461
NC_015957:5082172:5102091510209151038121722Streptomyces violaceusniger Tu 4113 chromosome, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein2e-123443
NC_008146:4936262:4939191493919149408311641Mycobacterium sp. MCS, complete genomefumarate reductase/succinate dehydrogenase flavoprotein-like protein3e-80299
NC_009077:5286275:5287065528706552888251761Mycobacterium sp. JLS, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein5e-80299
NC_008705:4975402:4978211497821149799711761Mycobacterium sp. KMS, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein5e-80298
NC_016887:511034:5273145273145290141701Nocardia cyriacigeorgica GUH-2, complete genome3-ketosteroid-delta-1-dehydrogenase6e-77288
NC_010512:951527:9746489746489763571710Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencefumarate reductase/succinate dehydrogenase flavoprotein domain protein3e-75283
NC_017986:5605197:5633030563303056347451716Pseudomonas putida ND6 chromosome, complete genomePutative succinate dehydrogenase1e-67257
NC_007951:925442:9468139468139486031791Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative dehydrogenase2e-66253
NC_008146:4019711:4037766403776640395471782Mycobacterium sp. MCS, complete genomefumarate reductase/succinate dehydrogenase flavoprotein-like protein1e-62241
NC_008705:4053070:4072248407224840740291782Mycobacterium sp. KMS, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein1e-62241
NC_014246:57021:6074260742625501809Mobiluncus curtisii ATCC 43063 chromosome, complete genomeputative 3-oxosteroid 1-dehydrogenase9e-62238
NC_007974:2048000:2090060209006020917631704Ralstonia metallidurans CH34 chromosome 2, complete sequencefumarate reductase/succinate dehydrogenase flavoprotein-like protein3e-60233
NC_009921:5609770:5632068563206856337621695Frankia sp. EAN1pec, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein1e-59231
NC_007974:2097334:2155187215518721568541668Ralstonia metallidurans CH34 chromosome 2, complete sequencefumarate reductase/succinate dehydrogenase flavoprotein-like protein2e-54213
NC_007517:2515870:2516692251669225183021611Geobacter metallireducens GS-15, complete genomeFumarate reductase/succinate dehydrogenase flavoprotein-like3e-53209
NC_013165:1584977:1586305158630515879781674Slackia heliotrinireducens DSM 20476, complete genomesuccinate dehydrogenase/fumarate reductase flavoprotein subunit8e-47188
NC_015422:4508028:4518046451804645197851740Alicycliphilus denitrificans K601 chromosome, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein8e-32139
NC_014727:95875:9771797717996001884Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,fumarate reductase flavoprotein subunit1e-28128
NC_015278:538500:5565165565165583871872Aerococcus urinae ACS-120-V-Col10a chromosome, complete genomeflavocytochrome c8e-27122
NC_009633:365325:3653253653253672591935Alkaliphilus metalliredigens QYMF chromosome, complete genomeflavocytochrome c1e-25118
NC_005362:52848:7154871548733981851Lactobacillus johnsonii NCC 533, complete genomehypothetical protein2e-25117
NC_015602:1810500:1824768182476818266181851Lactobacillus kefiranofaciens ZW3 chromosome, complete genomesuccinate dehydrogenase4e-25116
NC_018524:4564493:4579050457905045805221473Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeFAD binding domain protein6e-25115
NC_014118:1592000:1613019161301916145991581Burkholderia sp. CCGE1002 chromosome chromosome 2, completefumarate reductase/succinate dehydrogenase flavoprotein domain protein5e-24113
NC_011830:4187362:4202017420201742037501734Desulfitobacterium hafniense DCB-2, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein5e-24112
NC_006814:51500:6595665956671461191Lactobacillus acidophilus NCFM, complete genomefumarate reductase flavoprotein subunit1e-23112
NC_009633:3522933:3533262353326235350701809Alkaliphilus metalliredigens QYMF chromosome, complete genomeflavocytochrome c1e-23111
NC_015214:48999:6352863528652371710Lactobacillus acidophilus 30SC chromosome, complete genomefumarate reductase flavoprotein subunit4e-23110
NC_014152:241776:2514472514472531591713Thermincola sp. JR, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein6e-23109
NC_014724:59000:7385773857757161860Lactobacillus amylovorus GRL 1112 chromosome, complete genomefumarate reductase flavoprotein subunit6e-23109
NC_003454:677699:6871836871836888591677Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeFumarate reductase flavoprotein subunit4e-23109
NC_015376:345347:3591693591693606561488Burkholderia gladioli BSR3 chromosome chromosome 2, completeputative aspartate oxidase3e-22107
NC_015732:2735753:2737027273702727387661740Spirochaeta caldaria DSM 7334 chromosome, complete genomeflavocytochrome c7e-22105
NC_014727:995480:1014770101477010161641395Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,fumarate reductase, flavoprotein subunit4e-20100
NC_009922:411434:4437664437664455291764Alkaliphilus oremlandii OhILAs, complete genomeflavocytochrome c3e-20100
NC_011830:2177187:2206085220608522078001716Desulfitobacterium hafniense DCB-2, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein5e-2099.8
NC_013971:1660144:1660144166014416629212778Erwinia amylovora ATCC 49946 chromosome, complete genomeNADH:flavin oxidoreductase7e-2099
NC_013961:1622616:1622616162261616253932778Erwinia amylovora, complete genomefumarate reductase flavoprotein subunit7e-2099
NC_014220:1732254:1743412174341217451151704Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeSuccinate dehydrogenase2e-1997.8
NC_013171:416279:4282224282224299971776Anaerococcus prevotii DSM 20548, complete genomeflavocytochrome c5e-1996.7
NC_015724:129331:1373221373221387611440Cupriavidus necator N-1 plasmid BB2p, complete sequencesuccinate dehydrogenase/fumarate reductase flavoprotein subunit7e-1995.9
NC_013204:799857:7998577998578015451689Eggerthella lenta DSM 2243, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein8e-1995.9
NC_010694:2138000:2178003217800321807802778Erwinia tasmaniensis, complete genomePutative NADH:flavin oxidoreductase1e-1895.5
NC_015186:2197236:2217537221753722192101674Acidiphilium multivorum AIU301, complete genomehypothetical protein1e-1895.1
NC_012214:2221702:2266941226694122697182778Erwinia pyrifoliae Ep1/96, complete genomeFlavocytochrome c2e-1894.4
NC_010511:3106418:3117416311741631189271512Methylobacterium sp. 4-46 chromosome, complete genometricarballylate dehydrogenase1e-1792
NC_015391:2488450:2489432248943224909341503Carnobacterium sp. 17-4 chromosome, complete genomeL-aspartate oxidase2e-1791.3
NC_009802:1659257:1674756167475616762911536Campylobacter concisus 13826, complete genomeflavoCytochrome c flavin subunit5e-1789.7
NC_015724:129331:1459111459111473741464Cupriavidus necator N-1 plasmid BB2p, complete sequencefumarate reductase flavoprotein subunit1e-1688.6
NC_009092:3682413:3693260369326036950501791Shewanella loihica PV-4, complete genomeflavocytochrome c1e-1688.6
NC_011894:6485500:6499240649924065007481509Methylobacterium nodulans ORS 2060, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein1e-1688.6
NC_014830:3438504:3495126349512634965561431Intrasporangium calvum DSM 43043 chromosome, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein1e-1688.6
NC_014618:1809369:1809369180936918121462778Enterobacter cloacae SCF1 chromosome, complete genomeflavocytochrome c3e-1687.4
NC_014328:3336000:3340834334083433436142781Clostridium ljungdahlii ATCC 49587 chromosome, complete genomefumarate reductase/succinate dehydrogenase flavoprotein-like protein4e-1686.7
NC_009483:936000:9565009565009582961797Geobacter uraniireducens Rf4 chromosome, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein5e-1686.7
NC_008054:930890:9468849468849483531470Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completePutative fumarate reductase (flavoprotein)8e-1685.9
NC_008054:930890:9370839370839385521470Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completePutative fumarate reductase (flavoprotein)8e-1685.9
NC_009921:3551036:3594355359435535958031449Frankia sp. EAN1pec, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein1e-1585.5
NC_014364:894373:8993928993929016082217Spirochaeta smaragdinae DSM 11293 chromosome, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein7e-1582.4
NC_015738:2773552:2780732278073227824051674Eggerthella sp. YY7918, complete genomehypothetical protein9e-1582.4
NC_009092:2644164:2664207266420726657661560Shewanella loihica PV-4, complete genomeflavocytochrome c1e-1481.6
NC_015738:629297:6345956345956362651671Eggerthella sp. YY7918, complete genomesuccinate dehydrogenase2e-1481.3
NC_014541:2510819:2531525253152525332911767Ferrimonas balearica DSM 9799 chromosome, complete genomeflavocytochrome c2e-1378.2
NC_014830:3438504:3492220349222034937251506Intrasporangium calvum DSM 43043 chromosome, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein5e-1376.6
NC_014328:938393:9563509563509578101461Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative reductase flavoprotein subunit5e-1376.6
NC_008529:906576:925112925112925954843Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete7e-1375.9
NC_008529:887008:933464933464934306843Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete7e-1375.9
NC_008529:918277:933464933464934306843Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete7e-1375.9
NC_008529:887008:925112925112925954843Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete7e-1375.9
NC_008529:906576:933464933464934306843Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete7e-1375.9
NC_008529:918277:925112925112925954843Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete7e-1375.9
NC_013204:2955500:2958608295860829602901683Eggerthella lenta DSM 2243, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein7e-1375.9
NC_011830:633195:6342336342336362061974Desulfitobacterium hafniense DCB-2, complete genomeFMN-binding domain protein9e-1375.5
NC_013204:74855:9579995799973371539Eggerthella lenta DSM 2243, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein1e-1171.6
NC_015379:2505233:2505233250523325066871455Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative oxidoreductase3e-1170.9
NC_013204:2955500:2964079296407929657461668Eggerthella lenta DSM 2243, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein3e-1170.5
NC_010814:1336943:1344729134472913464381710Geobacter lovleyi SZ, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein9e-1168.9
NC_013204:3491441:3507113350711335087711659Eggerthella lenta DSM 2243, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein1e-1068.2
NC_011830:1190502:1193582119358211953781797Desulfitobacterium hafniense DCB-2, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein2e-1068.2
NC_014914:439285:4630424630424644451404Taylorella equigenitalis MCE9 chromosome, complete genomeTcuA protein2e-1067.8
NC_008322:2637646:2645436264543626469561521Shewanella sp. MR-7, complete genomeflavocytochrome c8e-1065.9
NC_009092:3783000:3786798378679837884651668Shewanella loihica PV-4, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein9e-1065.9
NC_008321:2569315:2577100257710025786201521Shewanella sp. MR-4, complete genomeflavocytochrome c1e-0965.1
NC_008054:1649160:165578416557841656572789Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete9e-0962.4
NC_013204:799857:8028138028138046121800Eggerthella lenta DSM 2243, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein1e-0862
NC_013165:2700978:2702900270290027046211722Slackia heliotrinireducens DSM 20476, complete genomesuccinate dehydrogenase/fumarate reductase flavoprotein subunit8e-0859.3
NC_015738:2773552:2786784278678427885411758Eggerthella sp. YY7918, complete genomehypothetical protein8e-0859.3
NC_016943:3270308:3290614329061432919871374Blastococcus saxobsidens DD2, complete genomeFumarate reductase/succinate dehydrogenase flavoprotein-like protein2e-0758.2
NC_012982:1569426:1575586157558615769771392Hirschia baltica ATCC 49814, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein3e-0757
NC_010511:2163570:2163570216357021649641395Methylobacterium sp. 4-46 chromosome, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein5e-0653.1