Pre_GI: BLASTP Hits

Some Help

Query: NC_007948:4558000:4590395 Polaromonas sp. JS666, complete genome

Start: 4590395, End: 4591306, Length: 912

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003296:1419992:144028214402821441178897Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE SUBSTRATE-BINDING PERIPLASMIC (PBP) ABC TRANSPORTER PROTEIN5e-47188
NC_014310:1413210:143883314388331439723891Ralstonia solanacearum PSI07 megaplasmid, complete sequencesubstrate-binding periplasmic (pbp) ABC transporter protein2e-46186
NC_010511:6756000:676616967661696767065897Methylobacterium sp. 4-46 chromosome, complete genomeextracellular solute-binding protein2e-39163
NC_015726:406450:429482429482430420939Cupriavidus necator N-1 chromosome 1, complete sequenceglutamate/aspartate ABC transporter permease GltI2e-39163
NC_008314:1825223:184588918458891846827939Ralstonia eutropha H16 chromosome 2, complete sequenceABC-type transporter, periplasmic component: PAAT family2e-39162
NC_007347:1215358:122138312213831222276894Ralstonia eutropha JMP134 chromosome 1, complete sequenceextracellular solute-binding protein, family 35e-37155
NC_016612:3087615:309957030995703100481912Klebsiella oxytoca KCTC 1686 chromosome, complete genomeglutamate and aspartate transporter subunit5e-36151
NC_015138:3022414:304446530444653045361897Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completefamily 3 extracellular solute-binding protein8e-36150
NC_010473:623810:625394625394626302909Escherichia coli str. K-12 substr. DH10B, complete genomeglutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily3e-35149
NC_010505:5035668:504504550450455045944900Methylobacterium radiotolerans JCM 2831, complete genomeextracellular solute-binding protein family 32e-35149
NC_017223:51180:565055650557404900Bordetella pertussis CS chromosome, complete genomeamino acid ABC transporter binding protein8e-35147
NC_002929:52500:565055650557404900Bordetella pertussis Tohama I, complete genomeamino-acid ABC transporter binding protein precursor8e-35147
NC_007626:4135961:416472041647204165628909Magnetospirillum magneticum AMB-1, complete genomeABC-type amino acid transport/signal transduction systems, periplasmic component/domain2e-34146
NC_014323:3976351:402767740276774028594918Herbaspirillum seropedicae SmR1 chromosome, complete genomeamino acid ABC transporter/signal transduction system periplasmic protein8e-33140
NC_017075:4880807:488417548841754885077903Rubrivivax gelatinosus IL144, complete genomefamily 3 extracellular solute-binding protein8e-29127
NC_015138:272500:283696283696284613918Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completefamily 3 extracellular solute-binding protein2e-28126
NC_015856:439795:448627448627449535909Collimonas fungivorans Ter331 chromosome, complete genomeglutamate aspartate periplasmic binding protein4e-28125
NC_015138:4666544:468047446804744681385912Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completefamily 3 extracellular solute-binding protein4e-28125
NC_008752:4665699:467961846796184680529912Acidovorax avenae subsp. citrulli AAC00-1, complete genomeextracellular solute-binding protein, family 35e-28125
NC_008786:1332041:1353843135384313549641122Verminephrobacter eiseniae EF01-2, complete genomeextracellular solute-binding protein, family 33e-24112
NC_005955:947500:972281972281973192912Bartonella quintana str. Toulouse, complete genomeAmino-acid ABC transporter binding protein3e-22106
NC_012108:946314:960914960914961786873Desulfobacterium autotrophicum HRM2, complete genomeGltB11e-21103
NC_008783:671349:678545678545679453909Bartonella bacilliformis KC583, complete genomeglutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein6e-21101
NC_008783:671349:6770176770176783991383Bartonella bacilliformis KC583, complete genomeputative glutamate/aspartate ABC transporter, permease protein/periplasmic glutamate/aspartate-binding protein6e-21101
NC_010161:1598000:161336916133691614274906Bartonella tribocorum CIP 105476, complete genomeamino-acid ABC transporter binding protein7e-21101
NC_012846:1467446:149041414904141491319906Bartonella grahamii as4aup, complete genomeglutamate-aspartate ABC transporter periplasmic component GltI2e-1893.6
NC_017986:5867782:588338758833875884295909Pseudomonas putida ND6 chromosome, complete genomeextracellular solute-binding protein6e-1788.2
NC_009512:2782000:279212127921212793029909Pseudomonas putida F1, complete genomeextracellular solute-binding protein, family 36e-1788.2
NC_008786:3845988:384832538483253849149825Verminephrobacter eiseniae EF01-2, complete genomeextracellular solute-binding protein, family 33e-1479.3
NC_008702:1432952:1449038144903814500721035Azoarcus sp. BH72, complete genomeputative amino acid-binding protein1e-1377.4
NC_015978:1266196:128338612833861284177792Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completeABC transporter glutamine-binding protein glnH1e-1377
NC_016629:4081500:410174641017464102567822Desulfovibrio africanus str. Walvis Bay chromosome, completeABC transporter substrate-binding protein2e-1377
NC_020063:2785652:280459928045992805426828Enterobacteriaceae bacterium strain FGI 57, complete genomeamino acid ABC transporter substrate-binding protein, PAAT family3e-1376.3
NC_009380:1606270:160797716079771608861885Salinispora tropica CNB-440 chromosome, complete genomeextracellular solute-binding protein2e-1273.6
NC_016614:1543333:156438915643891565261873Vibrio sp. EJY3 chromosome 2, complete sequenceextracellular solute-binding protein6e-1271.6
NC_020409:621792:638065638065638871807Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeABC transporter glutamine-binding protein glnH1e-1170.9
NC_015857:731982:7529317529317539621032Brucella pinnipedialis B2/94 chromosome chromosome 1, completeamino acid ABC transporter periplasmic amino acid-binding protein8e-1167.8
NC_007413:4278252:427862142786214279436816Anabaena variabilis ATCC 29413, complete genomeextracellular solute-binding protein, family 33e-1066.2
NC_009505:727694:7493137493137503441032Brucella ovis ATCC 25840 chromosome I, complete sequenceamino acid ABC transporter periplasmic amino acid-binding protein3e-1065.9
NC_013119:707804:7294557294557304861032Brucella microti CCM 4915 chromosome 1, complete sequenceamino acid ABC transporter substrate-binding protein3e-1065.9
NC_020409:621792:629349629349630176828Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeExtracellular solute-binding protein family 36e-1065.1
NC_008011:924392:939981939981940730750Lawsonia intracellularis PHE/MN1-00, complete genomeABC-type amino acid transport/signal transduction systems, periplasmic component/domain6e-1065.1
NC_009654:4624459:4625689462568946267081020Marinomonas sp. MWYL1, complete genomeextracellular solute-binding protein1e-0963.9
NC_015376:2010009:203450220345022035323822Burkholderia gladioli BSR3 chromosome chromosome 2, completeextracellular solute-binding protein2e-0963.5
NC_014973:3414459:341797734179773418771795Geobacter sp. M18 chromosome, complete genomefamily 3 extracellular solute-binding protein2e-0963.5
NC_017248:721764:7433757433757444061032Brucella melitensis NI chromosome chromosome I, complete sequencegeneral L-amino acid-binding periplasmic protein AAPJ precursor2e-0963.2
NC_002695:4153394:4154046415404641550711026Escherichia coli O157:H7 str. Sakai, complete genomeputative periplasmic binding transport protein4e-0962.4
CP002185:3627992:3632001363200136330261026Escherichia coli W, complete genome4e-0962.4
NC_014761:1321187:1331137133113713321561020Oceanithermus profundus DSM 14977 chromosome, complete genomeamino acid ABC transporter substrate-binding protein, paat family4e-0962.4
NC_014377:1546124:154975815497581550594837Thermosediminibacter oceani DSM 16646 chromosome, complete genomeextracellular solute-binding protein family 38e-0961.2
NC_015602:1143038:115796011579601158775816Lactobacillus kefiranofaciens ZW3 chromosome, complete genomeglutamine ABC transporter binding protein1e-0860.8
NC_014306:4106569:410760341076034108418816Erwinia billingiae Eb661, complete genomepolar amino acid ABC transporter, periplasmic ligand binding protein2e-0860.1
NC_019748:4129500:414625941462594147113855Stanieria cyanosphaera PCC 7437, complete genomeamino acid ABC transporter substrate-binding protein, PAAT family2e-0859.7
NC_017218:1166844:118298111829811183829849Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomeABC transporter substrate-binding protein5e-0858.9
NC_007929:1463295:150419615041961505026831Lactobacillus salivarius subsp. salivarius UCC118, complete genomeGlutamine-binding protein5e-0858.5
NC_012912:4737703:475823547582354759071837Dickeya zeae Ech1591, complete genomeextracellular solute-binding protein family 35e-0858.5
NC_015578:3371171:337494833749483375775828Treponema primitia ZAS-2 chromosome, complete genomeextracellular solute-binding protein, family 37e-0858.2
NC_004337:3590323:360989036098903610807918Shigella flexneri 2a str. 301, complete genomeputative periplasmic binding transport protein8e-0857.8
NC_011830:4031901:403190140319014032746846Desulfitobacterium hafniense DCB-2, complete genomeextracellular solute-binding protein family 39e-0857.8
NC_008027:5576458:557558955755895576461873Pseudomonas entomophila L48, complete genomeamino acid ABC transporter, periplasmic amino acid-binding protein1e-0757.4
NC_007516:1618033:1646318164631816473791062Synechococcus sp. CC9605, complete genomeextracellular solute-binding protein, family 31e-0757.4
NC_007907:2995889:300037030003703001215846Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-0757.4
NC_021175:1291707:131353213135321314398867Streptococcus oligofermentans AS 1.3089, complete genomeputative periplasmic solute-binding transport protein1e-0757
NC_015681:401084:406716406716407462747Thermodesulfatator indicus DSM 15286 chromosome, complete genomefamily 3 extracellular solute-binding protein2e-0756.6
NC_015275:1034230:105361510536151054481867Clostridium lentocellum DSM 5427 chromosome, complete genomeABC-type transporter, periplasmic subunit family 32e-0756.6
NC_006177:520055:531674531674532501828Symbiobacterium thermophilum IAM 14863, complete genomeamino acid ABC transporter substrate-binding protein2e-0756.6
NC_007907:5297477:531783553178355318665831Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0756.2
NC_004557:558500:577754577754578569816Clostridium tetani E88, complete genomecystine/glutamine-binding periplasmic protein4e-0755.8
NC_011887:72364:9346493464944891026Methylobacterium nodulans ORS 2060 plasmid pMNOD02, completeextracellular solute-binding protein family 35e-0755.5
NC_007645:3870466:388925938892593890059801Hahella chejuensis KCTC 2396, complete genomeABC-type amino acid transport/signal transduction systems, periplasmic component/domain8e-0754.7
NC_012880:3645304:364746736474673648303837Dickeya dadantii Ech703, complete genomeextracellular solute-binding protein family 31e-0653.9
NC_009436:2685910:270448927044892705289801Enterobacter sp. 638, complete genomecystine transporter subunit1e-0653.9
NC_016002:2037374:207232620723262073093768Pseudogulbenkiania sp. NH8B, complete genomecationic amino acid ABC transporter periplasmic binding protein1e-0653.9
NC_015672:1921023:192553519255351926362828Flexistipes sinusarabici DSM 4947 chromosome, complete genomeABC transporter periplasmic subunit family 32e-0653.5
NC_014958:1335650:134834013483401349095756Deinococcus maricopensis DSM 21211 chromosome, complete genomeABC transporter periplasmic subunit3e-0652.8
NC_010694:2492378:249237824923782493124747Erwinia tasmaniensis, complete genomeGlutamine high-affinity transporter3e-0652.8
NC_012881:3004784:303306830330683033856789Desulfovibrio salexigens DSM 2638, complete genomeextracellular solute-binding protein family 34e-0652.4
NC_014910:1050706:106286210628621063722861Alicycliphilus denitrificans BC chromosome, complete genomeextracellular solute-binding protein family 36e-0652
NC_011894:957897:969653969653970456804Methylobacterium nodulans ORS 2060, complete genomeextracellular solute-binding protein family 36e-0651.6