Pre_GI: BLASTP Hits

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Query: NC_007793:2217872:2239280 Staphylococcus aureus subsp. aureus USA300, complete genome

Start: 2239280, End: 2239615, Length: 336

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: USA300, a methicillin resistant strain of Staphylococcus aureus, has been implicated in epidemiologically unassociated outbreaks of skin and soft tissue infections among healthy individuals in at least 21 U.S. states, Canada and Europe. USA300 is also noted for its strong association with unusually invasive disease, including severe septicemia, necrotizing pneumonia and necrotizing fasciitis. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. S. aureus continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009641:2221891:224386122438612244199339Staphylococcus aureus subsp. aureus str. Newman chromosome,hypothetical protein1e-60231
NC_002951:2153571:217547821754782175813336Staphylococcus aureus subsp. aureus COL, complete genomehypothetical protein1e-60231
NC_016912:2035589:205749620574962057831336Staphylococcus aureus subsp. aureus VC40 chromosome, completehypothetical protein1e-60231
NC_017341:2247696:226960322696032269938336Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,putative transcriptional regulator1e-60231
NC_009782:2230000:225200822520082252346339Staphylococcus aureus subsp. aureus Mu3, complete genomehypothetical protein1e-60231
NC_002953:2157781:217968621796862180024339Staphylococcus aureus subsp. aureus MSSA476, complete genomehypothetical protein1e-60231
NC_002745:2152000:217393821739382174276339Staphylococcus aureus subsp. aureus N315, complete genomehypothetical protein1e-60231
NC_010079:2217767:223967422396742240012339Staphylococcus aureus subsp. aureus USA300_TCH1516, completehypothetical protein1e-60231
NC_016928:2121919:214369821436982143919222Staphylococcus aureus subsp. aureus M013 chromosome, completeHxlR family transcriptional regulator4e-35146
NC_016047:3406488:340699934069993407325327Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeMarR family transcriptional regulator6e-1269.3
NC_014479:3245126:325087932508793251205327Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative transcriptional regulator6e-1269.3
NC_013517:825100:842502842502842798297Sebaldella termitidis ATCC 33386, complete genometranscriptional regulator, HxlR family1e-1168.2
NC_013929:5097389:509738950973895097763375Streptomyces scabiei 87.22 chromosome, complete genomeDNA-binding protein1e-1168.2
NC_016114:3711000:371867937186793719023345Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeHxlR family transcriptional regulator2e-1167.8
NC_014666:1117000:113178611317861132160375Frankia sp. EuI1c chromosome, complete genometranscriptional regulator, HxlR family2e-1167.8
NC_014393:3979350:398401939840193984327309Clostridium cellulovorans 743B chromosome, complete genometranscriptional regulator, HxlR family4e-1167
NC_018665:2563375:256690725669072567227321Exiguobacterium antarcticum B7 chromosome, complete genomeTranscriptional regulator, HxlR family1e-1065.1
NC_010556:2773396:277696127769612777281321Exiguobacterium sibiricum 255-15, complete genometranscriptional regulator, HxlR family2e-1064.7
NC_020291:2487575:250672525067252507060336Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometranscriptional regulator, HxlR family2e-1064.3
NC_011832:2760000:276901427690142769349336Candidatus Methanosphaerula palustris E1-9c, complete genometranscriptional regulator, HxlR family4e-1063.5
NC_017093:8518961:852627585262758526613339Actinoplanes missouriensis 431, complete genomeputative HxlR-family transcriptional regulator9e-1062.4
NC_014554:1339566:135626713562671356587321Lactobacillus plantarum subsp. plantarum ST-III chromosome,MarR family transcriptional regulator9e-1062.4
NC_012659:4877410:491609749160974916411315Bacillus anthracis str. A0248, complete genomehypothetical protein1e-0961.6
NC_012581:4882525:491852149185214918835315Bacillus anthracis str. CDC 684 chromosome, complete genomehypothetical protein1e-0961.6
NC_003997:4876415:491607149160714916385315Bacillus anthracis str. Ames, complete genomehypothetical protein1e-0961.6
NC_007530:4877500:491619749161974916511315Bacillus anthracis str. 'Ames Ancestor', complete genomehypothetical protein1e-0961.6
NC_011772:5021404:505731850573185057632315Bacillus cereus G9842, complete genomehypothetical protein1e-0961.6
NC_006274:4940922:497719449771944977517324Bacillus cereus E33L, complete genomepossible transcriptional regulator1e-0961.6
NC_005957:4904000:492087049208704921193324Bacillus thuringiensis serovar konkukian str. 97-27, completepossible transcriptional regulator1e-0961.6
NC_005945:4898841:491740849174084917731324Bacillus anthracis str. Sterne, complete genomehypothetical protein1e-0961.6
NC_003909:4854379:488915748891574889471315Bacillus cereus ATCC 10987, complete genomehypothetical protein1e-0961.6
NC_012472:4908245:494278649427864943100315Bacillus cereus 03BB102, complete genomehypothetical protein1e-0961.6
NC_017208:5143500:516047351604735160787315Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeMarR family transcriptional regulator1e-0961.6
NC_016779:4864056:489754948975494897863315Bacillus cereus F837/76 chromosome, complete genomeHxlR family transcriptional regulator1e-0961.6
NC_016771:4882886:489451048945104894824315Bacillus cereus NC7401, complete genomehypothetical protein1e-0961.6
NC_011969:4841358:487698648769864877300315Bacillus cereus Q1 chromosome, complete genometranscriptional regulator1e-0961.6
NC_011773:4940921:497739149773914977705315Bacillus cereus AH820 chromosome, complete genomehypothetical protein1e-0961.6
NC_011725:5075285:511086451108645111178315Bacillus cereus B4264 chromosome, complete genomehypothetical protein1e-0961.6
NC_011658:4925346:494218749421874942501315Bacillus cereus AH187 chromosome, complete genomehypothetical protein1e-0961.6
NC_014335:4848389:486569548656954866009315Bacillus cereus biovar anthracis str. CI chromosome, completeputative transcriptional regulator1e-0961.6
NC_016935:517054:518607518607518921315Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein4e-0960.1
NC_010184:4909183:494921949492194949533315Bacillus weihenstephanensis KBAB4, complete genometranscriptional regulator, HxlR family1e-0858.5
NC_003552:484000:495076495076495432357Methanosarcina acetivorans C2A, complete genomehypothetical protein1e-0858.5
NC_015563:4093650:409986540998654100188324Delftia sp. Cs1-4 chromosome, complete genomeHxlR family transcriptional regulator1e-0858.2
NC_010002:3399770:341808934180893418412324Delftia acidovorans SPH-1, complete genometranscriptional regulator, HxlR family2e-0858.2
NC_011894:6731115:673226567322656732669405Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, HxlR family2e-0857.8
NC_017243:554500:570392570392570748357Brachyspira intermedia PWS/A chromosome, complete genometranscriptional regulator4e-0857
NC_016641:2618587:264095026409502641342393Paenibacillus terrae HPL-003 chromosome, complete genomesite-specific recombinase, phage integrase family protein4e-0857
NC_011832:2760000:276420427642042764578375Candidatus Methanosphaerula palustris E1-9c, complete genometranscriptional regulator, HxlR family5e-0856.6
NC_016047:683368:689392689392689721330Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completecinnamoyl ester hydrolase8e-0855.8
NC_000964:4164683:416664641666464167023378Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein1e-0755.1
NC_013665:1865122:187115518711551871547393Methanocella paludicola SANAE, complete genomeHxlR family transcriptional regulator2e-0754.7
NC_020210:2133996:215086221508622151227366Geobacillus sp. GHH01, complete genomeHTH-type transcriptional activator2e-0754.3
NC_014540:2828299:283131528313152831683369Burkholderia sp. CCGE1003 chromosome 2, complete sequenceHxlR family transcriptional regulator2e-0754.3
NC_015589:1523203:152596215259621526339378Desulfotomaculum ruminis DSM 2154 chromosome, complete genomehelix-turn-helix HxlR type3e-0753.9
NC_013202:1947876:196370519637051964079375Halomicrobium mukohataei DSM 12286, complete genometranscriptional regulator, HxlR family3e-0753.9
NC_012912:3853377:386013538601353860512378Dickeya zeae Ech1591, complete genometranscriptional regulator, HxlR family4e-0753.5
NC_013592:713036:721169721169721546378Dickeya dadantii Ech586, complete genometranscriptional regulator, HxlR family4e-0753.5
NC_009848:2335265:233891723389172339273357Bacillus pumilus SAFR-032, complete genometranscriptional regulator4e-0753.5
NC_018681:5378197:538376753837675384126360Nocardia brasiliensis ATCC 700358 chromosome, complete genometranscriptional regulator4e-0753.5
NC_018681:9262000:927988092798809280248369Nocardia brasiliensis ATCC 700358 chromosome, complete genometranscriptional regulator5e-0753.1
NC_008314:477722:511576511576511959384Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator, ArsR-family5e-0753.1
NC_015690:4592582:461106646110664611458393Paenibacillus mucilaginosus KNP414 chromosome, complete genomeYdeP25e-0753.1
NC_014258:42262:688576885769258402Pantoea vagans C9-1 plasmid pPag3, complete sequenceHTH-type transcriptional regulator5e-0753.1
NC_005363:3562205:356491435649143565234321Bdellovibrio bacteriovorus HD100, complete genomehypothetical protein6e-0752.8
NC_016612:5231065:525917952591795259565387Klebsiella oxytoca KCTC 1686 chromosome, complete genometranscription regulator protein1e-0652
NC_018664:1573925:159220415922041592551348Clostridium acidurici 9a chromosome, complete genomeHxlR family HTH transcriptional regulator1e-0652
NC_012108:1694817:171756517175651717891327Desulfobacterium autotrophicum HRM2, complete genometranscriptional regulator (MarR family protein)1e-0652
NC_013132:6385223:640466664046666405043378Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, HxlR family1e-0652
NC_013745:104385:149400149400149768369Haloterrigena turkmenica DSM 5511 plasmid pHTUR02, completetranscriptional regulator, HxlR family3e-0650.8
NC_014328:1596016:161022916102291610597369Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative transcriptional regulator3e-0650.8
NC_007645:3630884:364553936455393645904366Hahella chejuensis KCTC 2396, complete genomepredicted transcriptional regulator5e-0650.1
NC_020260:2725201:272839827283982728781384Cronobacter sakazakii Sp291, complete genomehypothetical protein4e-0650.1
NC_015873:1487127:149256014925601492943384Megasphaera elsdenii DSM 20460, complete genometranscriptional regulator4e-0650.1
NC_009699:1698951:170543517054351705788354Clostridium botulinum F str. Langeland chromosome, complete genometranscriptional regulator4e-0650.1
NC_003909:927955:948594948594948932339Bacillus cereus ATCC 10987, complete genomehypothetical protein4e-0650.1
NC_015587:981808:100533710053371005672336Hydrogenobaculum sp. SHO chromosome, complete genometranscriptional regulator, HxlR family5e-0649.7
NC_015557:981698:100522510052251005560336Hydrogenobaculum sp. 3684 chromosome, complete genometranscriptional regulator, HxlR family5e-0649.7
NC_020411:981888:100541410054141005749336Hydrogenobaculum sp. HO, complete genometranscriptional regulator, HxlR family5e-0649.7
NC_012658:1658505:166461716646171664970354Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative transcriptional regulator6e-0649.7
NC_016935:4117485:413160741316074131957351Paenibacillus mucilaginosus 3016 chromosome, complete genomehth-type transcriptional regulator ykvn8e-0649.3
NC_015690:6521740:652859465285946528953360Paenibacillus mucilaginosus KNP414 chromosome, complete genomeHxlR family transcriptional regulator9e-0648.9