Pre_GI: BLASTP Hits

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Query: NC_007333:430000:430143 Thermobifida fusca YX, complete genome

Start: 430143, End: 431012, Length: 870

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013947:5431741:545502854550285455894867Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeUroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase3e-62238
NC_003155:4441559:444496644449664445832867Streptomyces avermitilis MA-4680, complete genometetrapyrrole methylase3e-62238
NC_018750:3249756:325257232525723253450879Streptomyces venezuelae ATCC 10712, complete genomerRNA small subunit methyltransferase I3e-60231
NC_009664:3245210:326485232648523265823972Kineococcus radiotolerans SRS30216, complete genomeUroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase3e-59228
NC_014246:536338:538136538136539002867Mobiluncus curtisii ATCC 43063 chromosome, complete genomeputative methyltransferase7e-45181
NC_014314:1230687:125316912531691253987819Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeuroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase7e-41167
NC_006576:1435422:144689414468941447772879Synechococcus elongatus PCC 6301, complete genometetrapyrrole methylase family protein2e-40166
NC_007604:168176:173111173111173989879Synechococcus elongatus PCC 7942, complete genomehypothetical protein2e-40166
NC_007513:1721359:172446617244661725326861Synechococcus sp. CC9902, complete genomehypothetical protein3e-40165
NC_006177:3457637:347372634737263474481756Symbiobacterium thermophilum IAM 14863, complete genometetrapyrrole methylase family protein2e-38159
NC_013894:1288282:130389813038981304578681Thermocrinis albus DSM 14484 chromosome, complete genomeUroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase8e-38157
NC_008319:1829571:184741118474111848277867Synechococcus sp. CC9311, complete genomeconserved hypothetical protein TIGR000962e-37156
NC_007516:532500:552610552610553467858Synechococcus sp. CC9605, complete genomehypothetical protein5e-36151
NC_015311:2626850:266501526650152665731717Prevotella denticola F0289 chromosome, complete genomeS-adenosylmethionine-dependent methyltransferase, YraL family9e-36150
NC_012673:1650139:165013916501391651008870Exiguobacterium sp. AT1b, complete genomeUroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase1e-35150
NC_003030:303812:360376360376361224849Clostridium acetobutylicum ATCC 824, complete genomePredicted methyltransferase8e-35147
NC_015687:303810:360372360372361220849Clostridium acetobutylicum DSM 1731 chromosome, complete genomemethyltransferase8e-35147
NC_014654:391201:405966405966406826861Halanaerobium sp. 'sapolanicus' chromosome, complete genomeUroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase4e-34145
NC_007645:6013242:601545560154556016303849Hahella chejuensis KCTC 2396, complete genomepredicted methyltransferase3e-33142
NC_015061:4286000:430366743036674304536870Rahnella sp. Y9602 chromosome, complete genomeUroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase2e-33142
NC_017047:4379989:439755343975534398422870Rahnella aquatilis HX2 chromosome, complete genomeSAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase2e-33142
NC_016884:157894:178535178535179383849Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeribosomal RNA small subunit methyltransferase I7e-33141
NC_016012:16134:605226052261352831Candidatus Arthromitus sp. SFB-rat-Yit, complete genometetrapyrrole (Corrin/Porphyrin) methylase8e-33140
NC_015177:2795487:284107528410752841746672Pedobacter saltans DSM 12145 chromosome, complete genomeUroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase8e-33140
NC_014655:1038352:105226810522681052960693Leadbetterella byssophila DSM 17132 chromosome, complete genomeuroporphyriN-iii c/tetrapyrrole (corrin/porphyrin) methyltransferase8e-33140
NC_015144:1333179:135844713584471359121675Weeksella virosa DSM 16922 chromosome, complete genomeribosomal RNA small subunit methyltransferase I1e-32140
NC_013642:505518:505518505518506186669Thermotoga naphthophila RKU-10, complete genomeUroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase5e-32138
NC_011978:1812000:183269918326991833367669Thermotoga neapolitana DSM 4359, complete genomehypothetical protein8e-32137
NC_014171:1:401684016841043876Bacillus thuringiensis BMB171 chromosome, complete genomeCorrin/porphyrin methyltransferase5e-31135
NC_017208:1:397213972140596876Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeCorrin/porphyrin methyltransferase3e-31135
NC_005810:4306716:432765243276524328551900Yersinia pestis biovar Microtus str. 91001, complete genomeputative tetrapyrrole methylase3e-31135
NC_009089:4140764:414076441407644141597834Clostridium difficile 630, complete genomeputative corrin/porphyrin methyltransferase1e-30133
NC_013316:4018451:401917840191784020011834Clostridium difficile R20291, complete genomeputative corrin/porphyrin methyltransferase1e-30133
NC_004193:35698:438514385144732882Oceanobacillus iheyensis HTE831, complete genomehypothetical protein3e-30132
NC_017025:283182:284156284156284827672Flavobacterium indicum GPTSA100-9, complete genomemethyltransferase4e-30132
NC_012121:113912:132738132738133577840Staphylococcus carnosus subsp. carnosus TM300, complete genometetrapyrrole (corrin/porphyrin) methylase family protein4e-30131
NC_020195:285606:286595286595287260666Blattabacterium sp. (Blatta orientalis) str. Tarazona, completemethyltransferase8e-30130
NC_012997:4026000:405349240534924054331840Teredinibacter turnerae T7901, complete genomeputative tetrapyrrole methyltransferase1e-29130
NC_015913:35837:576575765758487831Candidatus Arthromitus sp. SFB-mouse-Japan, complete genometetrapyrrole methylase family protein1e-28127
NC_012560:1260031:127747012774701278333864Azotobacter vinelandii DJ, complete genometetrapyrrole methylase family protein4e-28125
NC_010003:1052997:107737410773741078054681Petrotoga mobilis SJ95, complete genomeUroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase3e-28125
NC_008390:235155:235863235863236753891Burkholderia cepacia AMMD chromosome 1, complete sequenceProtein of unknown function UPF00113e-28125
NC_016148:678175:678175678175679011837Thermovirga lienii DSM 17291 chromosome, complete genomeuroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase2e-28125
NC_011000:183928:184618184618185505888Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative methylase4e-27122
NC_017167:129988:163580163580164476897Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase7e-27121
NC_008532:469888:476474476474477340867Streptococcus thermophilus LMD-9, complete genomePredicted methyltransferase2e-25116
NC_006448:465656:472256472256473122867Streptococcus thermophilus LMG 18311, complete genometetrapyrrole methylase family protein2e-25116
NC_009718:1411793:143376714337671434510744Fervidobacterium nodosum Rt17-B1, complete genomeuroporphyrin-III C/tetrapyrrole methyltransferase3e-25115
NC_014958:557208:575106575106575960855Deinococcus maricopensis DSM 21211 chromosome, complete genomeribosomal RNA small subunit methyltransferase I2e-24113
NC_015381:252000:252885252885253775891Burkholderia gladioli BSR3 chromosome 1, complete sequencetetrapyrrole methylase family protein4e-24112
NC_014758:1349494:136450613645061365318813Calditerrivibrio nitroreducens DSM 19672 chromosome, completeuroporphyrin-iii c/tetrapyrrole (corrin/porphyrin) methyltransferase5e-24111
NC_014831:65408:8178581785830801296Thermaerobacter marianensis DSM 12885 chromosome, complete genomeUroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase6e-23108
NC_009883:1492425:151554715155471516449903Rickettsia bellii OSU 85-389, complete genomePutative methyltransferase4e-23108
NC_007940:1485006:150863915086391509541903Rickettsia bellii RML369-C, complete genomePutative methyltransferase4e-23108
NC_011992:392534:411349411349412263915Acidovorax ebreus TPSY, complete genomeUroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase3e-23108
NC_007651:3560652:359200735920073592894888Burkholderia thailandensis E264 chromosome I, complete sequenceconserved hypothetical protein TIGR000961e-22107
NC_008782:401667:420503420503421441939Acidovorax sp. JS42, complete genomeUroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase1e-22107
NC_005085:659378:682177682177683073897Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein2e-21103
NC_006350:3865584:389067838906783891565888Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative methylase6e-21101
NC_011047:443475:443475443475444317843Candidatus Phytoplasma mali, complete genometetrapyrrole (Corrin/Porphyrin) methylase5e-2098.2
NC_015696:47484:682106821069079870Francisella sp. TX077308 chromosome, complete genomerRNA small subunit methyltransferase I1e-1997.1
NC_016633:2239413:225363922536392254331693Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeputative S-adenosylmethionine-dependent methyltransferase, YraL family2e-1996.3
NC_009465:29735:626826268263512831Candidatus Vesicomyosocius okutanii HA, complete genomemethyltransferase9e-1787.4
NC_017238:427482:449378449378450052675Borrelia afzelii PKo chromosome, complete genometetrapyrrole (Corrin/Porphyrin) Methylases family protein8e-1581.3
NC_008277:428926:450819450819451496678Borrelia afzelii PKo, complete genomehypothetical protein9e-1580.9
NC_011025:134292:155841155841156545705Mycoplasma arthritidis 158L3-1, complete genomeputative SAM-dependent methyltransferase2e-1480.1
NC_006156:427358:449165449165449839675Borrelia garinii PBi chromosome linear, complete sequencehypothetical protein2e-1479.7
NC_017063:775337:777831777831778691861Helicobacter pylori ELS37 chromosome, complete genomeputative methylase3e-1479.3
NC_015921:425225:445794445794446468675Borrelia bissettii DN127 chromosome, complete genometetrapyrrole methylase family protein4e-1479
NC_014256:683384:723998723998724861864Helicobacter pylori B8 chromosome, complete genomehypothetical protein4e-1478.6
NC_017437:49643:537845378454503720Chlamydia trachomatis A2497 chromosome, complete genomeTetrapyrrole (Corrin/Porphyrin) methylase family protein2e-1273.6
NC_007429:49647:539025390254615714Chlamydia trachomatis A/HAR-13, complete genometetrapyrrole (corrin/porphyrin) methylase family protein1e-1273.6
NC_012686:49643:538715387154584714Chlamydia trachomatis B/Jali20/OT chromosome, complete genomehypothetical protein1e-1273.6
NC_012687:49640:537875378754500714Chlamydia trachomatis B/TZ1A828/OT chromosome, complete genomehypothetical protein1e-1273.6
NC_016798:49643:537905379054503714Chlamydia trachomatis A2497, complete genomehypothetical protein1e-1273.6
NC_015500:2950660:295595129559512956685735Treponema brennaborense DSM 12168 chromosome, complete genomeRibosomal RNA small subunit methyltransferase I1e-1273.6
NC_015744:367142:375255375255375968714Chlamydia trachomatis L2c chromosome, complete genomeSAM-dependent methyltransferase1e-1170.9
NC_010287:372000:375546375546376259714Chlamydia trachomatis 434/Bu, complete genomehypothetical protein1e-1170.9
NC_017429:45965:532615326153974714Chlamydia trachomatis G/9768 chromosome, complete genomeSAM-dependent methyltransferase1e-1170.5
NC_017430:49052:533095330954022714Chlamydia trachomatis G/11222 chromosome, complete genomeSAM-dependent methyltransferase1e-1170.5
NC_017432:45965:532615326153974714Chlamydia trachomatis G/9301 chromosome, complete genomeSAM-dependent methyltransferase1e-1170.5
NC_017440:45965:532615326153974714Chlamydia trachomatis G/11074 chromosome, complete genomeSAM-dependent methyltransferase1e-1170.5
NC_017439:45953:534045340454117714Chlamydia trachomatis E/150 chromosome, complete genomehypothetical protein1e-1170.5
NC_016940:2974396:299641029964102997117708Saprospira grandis str. Lewin chromosome, complete genomeuroporphyrin-iii c/tetrapyrrole (corrin/porphyrin) methyltransferase7e-0858.2