Pre_GI Gene

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Host: NC_012687 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012687:49640 Chlamydia trachomatis B/TZ1A828/OT chromosome, complete genome

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: Chlamydia trachomatis B/Jali20/OT is a clinical strain isolated from the conjunctiva in an active case of trachoma. Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. Chlamydia trachomatis causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
4964050113474single-stranded DNA-binding proteinQuickGO ontologyBLASTP
50454519531500leucyl aminopeptidaseQuickGO ontologyBLASTP
5209052593504Histone H1-like protein HC2QuickGO ontologyBLASTP
5274853692945hypothetical proteinBLASTP
5378754500714hypothetical proteinBLASTP
54591560631473hypothetical proteinBLASTP
56122578701749hypothetical proteinBLASTP
57974595361563hypothetical proteinBLASTP
59590607261137coproporphyrinogen III oxidaseQuickGO ontologyBLASTP
6071661162447hypothetical proteinBLASTP
614946420527122-oxoglutarate dehydrogenase E1 componentQuickGO ontologyBLASTP
64209653061098dihydrolipoamide succinyltransferaseQuickGO ontologyBLASTP
6533566066732hypothetical proteinBLASTP
660756788318094-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseQuickGO ontologyBLASTP