Pre_GI Gene

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Host: NC_012686 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012686:49643 Chlamydia trachomatis B/Jali20/OT chromosome, complete genome

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: Chlamydia trachomatis B/Jali20/OT is a clinical strain isolated from the conjunctiva in an active case of trachoma. Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. Chlamydia trachomatis causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
4964350116474single-stranded DNA-binding proteinQuickGO ontologyBLASTP
50457519561500leucyl aminopeptidaseQuickGO ontologyBLASTP
5209352677585Histone H1-like protein HC2QuickGO ontologyBLASTP
5283253776945hypothetical proteinBLASTP
5387154584714hypothetical proteinBLASTP
54675561471473hypothetical proteinBLASTP
56206579361731hypothetical proteinBLASTP
58040596021563hypothetical proteinBLASTP
59656607921137coproporphyrinogen III oxidaseQuickGO ontologyBLASTP
6078261228447hypothetical proteinBLASTP
615606427127122-oxoglutarate dehydrogenase E1 componentQuickGO ontologyBLASTP
64275653751101dihydrolipoamide succinyltransferaseQuickGO ontologyBLASTP
6540466135732hypothetical proteinBLASTP
661446795218094-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseQuickGO ontologyBLASTP