Pre_GI Gene

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Host: NC_007604 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007604:168176 Synechococcus elongatus PCC 7942, complete genome

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: This strain is a freshwater organism and is extensively studied due to its circadian clock which controls the expression of upwards of 800 genes during a 24 hour period. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1681761703472172glutamate-ammonia ligase glutamine synthetase type IIIQuickGO ontologyBLASTP
170498170752255hypothetical protein
1707971719151119cysteine synthaseQuickGO ontologyBLASTP
171912172205294hypothetical protein
1722021730718703-Phosphoadenosine 5-phosphosulfate PAPS 3-phosphatase-likeQuickGO ontologyBLASTP
173111173989879hypothetical proteinBLASTP
173986174198213hypothetical protein
174311174712402hypothetical proteinBLASTP
174709175497789ABC-type uncharacterized transport system permease component-likeQuickGO ontologyBLASTP
175494176471978ATPaseQuickGO ontologyBLASTP
176742177095354Secretion chaperone CsaAQuickGO ontologyBLASTP
177550178422873hypothetical proteinBLASTP
1784191797921374ATPaseQuickGO ontologyBLASTP
180156180881726hypothetical proteinBLASTP
181078181467390hypothetical proteinBLASTP
1814641825551092putative phosphate permeaseQuickGO ontologyBLASTP
1826201841461527Gamma-glutamyltranspeptidaseQuickGO ontologyBLASTP
184160184411252possible DNA polymeraseQuickGO ontologyBLASTP
1844181854611044hypothetical proteinBLASTP
1856821874181737diguanylate cyclasephosphodiesterase GGDEF EAL domains with PASPAC sensorsQuickGO ontologyBLASTP
1875311892581728GMP synthaseQuickGO ontologyBLASTP