Pre_GI Gene

Some Help

Host: NC_015744 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015744:367142 Chlamydia trachomatis L2c chromosome, complete genome

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: This strain was isolated from a man with severe proctitis. This species causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes. Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. This species causes infection that leads to blindness and sexually transmitted diseases in humans.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
3661843671881005holliday junction DNA helicase RuvBQuickGO ontologyBLASTP
367142368002861hypothetical protein
3680633700632001carbohydrate-binding module 48 Isoamylase N-terminal domain family proteinQuickGO ontologyBLASTP
370184370687504tir chaperone protein CesT family proteinQuickGO ontologyBLASTP
371153371626474single-strand binding family proteinQuickGO ontologyBLASTP
371613371738126hypothetical protein
3719693734681500cytosol aminopeptidaseQuickGO ontologyBLASTP
373612374061450histone H1-like protein HC2QuickGO ontologyBLASTP
374216375160945DNA polymerase III delta subunitQuickGO ontologyBLASTP
375255375968714SAM-dependent methyltransferaseQuickGO ontologyBLASTP
3760593775311473hypothetical proteinBLASTP
3775903792571668C6orf205-like proteinQuickGO ontologyBLASTP
3792933809841692uncharacterized threonine-rich GPI-anchored glycoprotein PJ466402QuickGO ontologyBLASTP
3810453821751131radical SAM superfamily proteinQuickGO ontologyBLASTP
382165382611447hypothetical proteinBLASTP
382664382801138hypothetical proteinBLASTP
3829433856542712oxoglutarate dehydrogenase succinyl-transferring E1 componentQuickGO ontologyBLASTP
3856583867551098dihydrolipoyllysine-residue succinyltransferase E2 component of oxoglutarate dehydrogenase succinyl-transferring complexQuickGO ontologyBLASTP
386784387515732multi-copper polyphenol oxidoreductase laccase family proteinQuickGO ontologyBLASTP
38752438923017074-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseQuickGO ontologyBLASTP
389484389768285ATPase associated with chromosome architectureQuickGO ontologyBLASTP
389825389938114hypothetical protein
390029390145117hypothetical protein
390133390528396hypothetical protein