Pre_GI: BLASTP Hits

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Query: NC_007005:1605000:1612506 Pseudomonas syringae pv. syringae B728a, complete genome

Start: 1612506, End: 1612940, Length: 435

Host Lineage: Pseudomonas syringae; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is the causal agent of brown spot disease on beans. It was isolated from a snap bean leaflet in Wisconsin, USA. Plant pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007005:830467:840487840487840921435Pseudomonas syringae pv. syringae B728a, complete genomePeptidase S24, S26A and S26B2e-76283
NC_016830:3869572:387722238772223877647426Pseudomonas fluorescens F113 chromosome, complete genomeprotein UmuD1e-44178
NC_004129:5373886:542090954209095421361453Pseudomonas fluorescens Pf-5, complete genomeultraviolet light resistance protein A3e-42169
NC_009512:5632591:565849256584925658920429Pseudomonas putida F1, complete genomeputative prophage repressor6e-42169
NC_009434:3611738:363139136313913631822432Pseudomonas stutzeri A1501, complete genomeultraviolet light resistance protein A7e-38155
NC_007275:1:175717572182426Pseudomonas syringae pv. phaseolicola 1448A small plasmid, completeultraviolet light resistance protein A9e-37152
NC_015740:2998500:300064130006413000970330Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeultraviolet light resistance protein A2e-26117
NC_014394:2577949:258904525890452589485441Gallionella capsiferriformans ES-2 chromosome, complete genomePeptidase S24/S26A/S26B, conserved region6e-23105
NC_015410:2351464:238028123802812380712432Pseudomonas mendocina NK-01 chromosome, complete genomeprotein MucA9e-23105
NC_021066:1778000:178527517852751785694420Raoultella ornithinolytica B6, complete genomeDNA polymerase V subunit UmuD1e-21101
NC_004631:948054:981317981317981736420Salmonella enterica subsp. enterica serovar Typhi Ty2, completeUmuD protein2e-21100
NC_016002:2179969:218853921885392188967429Pseudogulbenkiania sp. NH8B, complete genomepeptidase S24 and S26 domain containing protein2e-21100
NC_016002:1741109:175018817501881750616429Pseudogulbenkiania sp. NH8B, complete genomepeptidase S24 and S26 domain containing protein2e-21100
NC_016514:2476359:248828724882872488781495Enterobacter cloacae EcWSU1 chromosome, complete genomeUmuD3e-21100
NC_016863:2029340:204076020407602041179420Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1DNA polymerase V subunit UmuD4e-21100
NC_016857:2027311:203873120387312039150420Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74DNA polymerase V subunit UmuD4e-21100
NC_016856:2085283:209256820925682092987420Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SDNA polymerase V subunit UmuD4e-21100
NC_016810:2027311:203873120387312039150420Salmonella enterica subsp. enterica serovar Typhimurium strDNA repair protein4e-21100
NC_009436:2395913:240450524045052404924420Enterobacter sp. 638, complete genomeDNA polymerase V subunit UmuD7e-2199.4
NC_006576:2683467:709970997659561Synechococcus elongatus PCC 6301, complete genomeDNA polymerase V1e-2098.2
NC_007604:1586243:160612916061291606689561Synechococcus elongatus PCC 7942, complete genomeDNA polymerase V1e-2098.2
NC_015761:1599000:160588716058871606315429Salmonella bongori NCTC 12419, complete genomeDNA repair protein2e-2098.2
NC_016445:89500:106849106849107298450Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeDNA polymerase V2e-2097.4
NC_012668:3037345:303929130392913039740450Vibrio cholerae MJ-1236 chromosome 1, complete sequenceerror-prone repair protein UmuD2e-2097.4
NC_010510:534024:541392541392541844453Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completepeptidase S24 and S26 domain protein7e-2095.9
NC_009792:1739970:174737317473731747789417Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein8e-2095.5
NC_012969:1574330:159093015909301591391462Methylovorus glucosetrophus SIP3-4 chromosome, complete genomepeptidase S24 and S26 domain-containing protein9e-2095.5
NC_010554:2646806:272478627247862725235450Proteus mirabilis HI4320, complete genomeDNA repair protein1e-1995.1
NC_015572:2186394:218769221876922188171480Methylomonas methanica MC09 chromosome, complete genomepeptidase S24/S26A/S26B2e-1994.4
NC_012559:1497548:152788615278861528506621Laribacter hongkongensis HLHK9, complete genomeUmuD protein1e-1891.7
NC_014733:1223359:123140312314031231840438Methylovorus sp. MP688 chromosome, complete genomepeptidase s24 and s26 domain protein2e-1891.3
NC_009648:1541699:159551215955121595931420Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeDNA polymerase V subunit UmuD3e-1890.5
NC_011283:2836000:289026328902632890745483Klebsiella pneumoniae 342 chromosome, complete genomeDNA polymerase V subunit UmuD4e-1890.1
NC_020541:1786500:180581018058101806289480Rhodanobacter sp. 2APBS1, complete genomeSOS response UmuD protein5e-1889.7
NC_011283:3177350:318657131865713187053483Klebsiella pneumoniae 342 chromosome, complete genomeDNA polymerase V subunit UmuD5e-1889.7
NC_015167:1154497:115575611557561156190435Cellulophaga lytica DSM 7489 chromosome, complete genomepeptidase S24/S26A/S26B8e-1889
NC_008341:29038:461294612946572444Nitrosomonas eutropha C91 plasmid1, complete sequenceputative prophage repressor1e-1788.6
NC_007626:2204767:224721922472192247689471Magnetospirillum magneticum AMB-1, complete genomeSOS-response transcriptional repressors2e-1787.8
NC_011742:1221416:124553912455391245958420Escherichia coli S88 chromosome, complete genomeDNA polymerase V subunit UmuD3e-1787
NC_004431:1443968:146808314680831468502420Escherichia coli CFT073, complete genomeUmuD protein3e-1787
NC_011601:1315746:133733613373361337755420Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeDNA polymerase V subunit UmuD5e-1786.3
NC_010473:1245284:127023112702311270650420Escherichia coli str. K-12 substr. DH10B, complete genomeDNA polymerase V, subunit D7e-1785.9
NC_009801:1296488:132144813214481321867420Escherichia coli E24377A, complete genomeprotein UmuD7e-1785.9
NC_008253:1228485:125123812512381251657420Escherichia coli 536, complete genomeUmuD protein7e-1785.9
NC_011751:1446073:147704214770421477461420Escherichia coli UMN026 chromosome, complete genomeDNA polymerase V subunit UmuD7e-1785.9
NC_012967:1205985:123091712309171231336420Escherichia coli B str. REL606 chromosome, complete genomeDNA polymerase V subunit UmuD7e-1785.9
NC_011757:276953:292315292315292770456Methylobacterium chloromethanicum CM4, complete genomepeptidase S24 and S26 domain protein1e-1685.5
NC_008740:1357312:136883113688311369268438Marinobacter aquaeolei VT8, complete genomeputative prophage repressor1e-1685.5
NC_011745:1287714:131060513106051311024420Escherichia coli ED1a chromosome, complete genomeDNA polymerase V subunit UmuD9e-1785.5
NC_009436:2056000:206974720697472070181435Enterobacter sp. 638, complete genomeprophage repressor1e-1684.7
NC_010725:356609:361808361808362272465Methylobacterium populi BJ001, complete genomepeptidase S24 and S26 domain protein2e-1684.7
NC_015424:2726223:276526527652652765627363Aeromonas veronii B565 chromosome, complete genomepeptidase S24-like domain-containing protein2e-1684.7
NC_016609:8251438:825282782528278253261435Niastella koreensis GR20-10 chromosome, complete genomeSOS response UmuD protein2e-1684
NC_011761:1499500:151324615132461513740495Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeumuD protein4e-1683.6
NC_014305:97055:112117112117112545429Erwinia billingiae Eb661 plasmid pEB170, complete sequenceDNA polymerase V subunit5e-1683.2
NC_017047:1934430:194357819435781944000423Rahnella aquatilis HX2 chromosome, complete genomeDNA polymerase V subunit UmuD6e-1682.8
NC_009927:253250:254670254670255101432Acaryochloris marina MBIC11017 plasmid pREB2, complete sequenceSOS mutagenesis protein UmuD, putative8e-1682.4
NC_005071:671084:688212688212688706495Prochlorococcus marinus str. MIT 9313, complete genomeputative SOS mutagenesis protein UmuD2e-1581.3
NC_014910:1912552:191889019188901919375486Alicycliphilus denitrificans BC chromosome, complete genomepeptidase s24/s26a/s26b, conserved region protein2e-1581.3
NC_012988:4262631:426666942666694267061393Methylobacterium extorquens DM4, complete genomeDNA polymerase V subunit D4e-1580.1
NC_016901:5130147:515061851506185151025408Shewanella baltica OS678 chromosome, complete genomepeptidase S24/S26A/S26B5e-1579.7
NC_009665:5072413:509286950928695093276408Shewanella baltica OS185 chromosome, complete genomeputative prophage repressor5e-1579.7
NC_009997:5188221:520999652099965210403408Shewanella baltica OS195, complete genomepeptidase S24 and S26 domain protein5e-1579.7
NC_014304:77715:878618786188307447Erwinia billingiae Eb661 plasmid pEB102, complete sequenceProtein SamA5e-1579.7
NC_015970:19850:238292382924263435Rhodothermus marinus SG0.5JP17-172 plasmid pRHOM17201, completepeptidase S24/S26A/S26B7e-1579.3
NC_009052:4168776:417661141766114177018408Shewanella baltica OS155, complete genomeputative prophage repressor6e-1579.3
NC_015222:2475792:249340424934042494024621Nitrosomonas sp. AL212 chromosome, complete genomepeptidase S24/S26A/S26B, conserved region1e-1478.2
NC_020064:1962172:197446219744621974884423Serratia marcescens FGI94, complete genomeSOS response transcriptional repressor, RecA-mediated autopeptidase1e-1478.2
NC_012108:442493:456512456512456931420Desulfobacterium autotrophicum HRM2, complete genomeUmuD12e-1477.8
NC_013282:1842412:184946718494671849934468Cronobacter turicensis, complete genomeProtein umuD2e-1477.8
NC_020260:1293860:130024713002471300684438Cronobacter sakazakii Sp291, complete genomeDNA polymerase V subunit UmuD2e-1477.8
NC_005966:2653945:267389626738962674522627Acinetobacter sp. ADP1, complete genomecomponent of DNA polymerase V2e-1477.4
NC_015731:2460248:246163624616362462241606Nitrosomonas sp. Is79A3 chromosome, complete genomepeptidase S24/S26A/S26B4e-1477
NC_014842:19411:458674586746373507Pantoea sp. At-9b plasmid pPAT9B05, complete sequencepeptidase S24/S26A/S26B4e-1477
NC_008570:2216736:225027522502752250697423Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeumuD protein8e-1475.9
NC_011662:2320100:233366623336662334121456Thauera sp. MZ1T, complete genomepeptidase S24 and S26 domain protein1e-1375.5
NC_007516:1086948:110718511071851107616432Synechococcus sp. CC9605, complete genomeputative SOS mutagenesis protein UmuD1e-1375.5
NC_015703:4483500:451653045165304516979450Runella slithyformis DSM 19594 chromosome, complete genomepeptidase S24/S26A/S26B, conserved region2e-1374.7
NC_010334:2615260:262260426226042623011408Shewanella halifaxensis HAW-EB4, complete genomepeptidase S24 and S26 domain protein4e-1373.6
CP002207:1358597:140795814079581408578621Bacillus atrophaeus 1942, complete genomeLexA repressor8e-1372.4
NC_014639:1358597:140795814079581408578621Bacillus atrophaeus 1942 chromosome, complete genomeLexA repressor8e-1372.4
NC_011881:1:390939094340432Arthrobacter chlorophenolicus A6 plasmid pACHL02, completepeptidase S24 and S26 domain protein7e-1372.4
NC_010334:2615260:264279526427952643202408Shewanella halifaxensis HAW-EB4, complete genomepeptidase S24 and S26 domain protein7e-1372.4
NC_004349:3938:113351133511739405Shewanella oneidensis MR-1 plasmid pMR-1, complete sequenceSOS mutagenesis protein RulA7e-1372.4
NC_014532:3596097:362965336296533630096444Halomonas elongata DSM 2581, complete genomehypothetical protein9e-1372
NC_006322:1959918:197677719767771977400624Bacillus licheniformis ATCC 14580, complete genomeLexA repressor1e-1272
NC_006856:95830:100863100863101300438Salmonella enterica subsp. enterica serovar Choleraesuis strImpA2e-1271.2
NC_007941:11319:558295582956266438Escherichia coli UTI89 plasmid pUTI89, complete sequenceUV protection and mutation protein2e-1271.2
NC_011894:4013830:401775640177564018211456Methylobacterium nodulans ORS 2060, complete genomepeptidase S24 and S26 domain protein2e-1271.2
NC_016830:4999946:501281650128165013007192Pseudomonas fluorescens F113 chromosome, complete genomeprotein UmuD2e-1270.9
NC_015566:3269469:328448832844883284913426Serratia sp. AS12 chromosome, complete genomepeptidase S24/S26A/S26B2e-1270.9
NC_014733:1073540:108092910809291081171243Methylovorus sp. MP688 chromosome, complete genomepeptidase s24 and s26 domain protein5e-1269.7
NC_011894:585637:622354622354622869516Methylobacterium nodulans ORS 2060, complete genomepeptidase S24 and S26 domain protein9e-1268.9
NC_020418:2868000:288122828812282881533306Morganella morganii subsp. morganii KT, complete genomeError-prone repair protein UmuD1e-1168.6
NC_016816:4129299:417061241706124171037426Pantoea ananatis LMG 5342, complete genomeUV protection protein1e-1168.6
NC_009453:36599:513145131451745432Arthrobacter sp. Rue61a plasmid pAL1, complete sequenceputative UmuD-like protein2e-1167.8
NC_014323:3976351:398335939833593983784426Herbaspirillum seropedicae SmR1 chromosome, complete genomeSOS mutagenesis protein5e-1166.6
NC_015424:3520783:355284035528403553283444Aeromonas veronii B565 chromosome, complete genomeprotein UmuD6e-1166.2
NC_007508:4476726:448566244856624486141480Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative polymerase V subunit6e-1166.2
NC_013446:2961647:297934429793442979754411Comamonas testosteroni CNB-2, complete genomeDNA polymerase V2e-1064.7
NC_008570:1143578:116544011654401165883444Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeprotein UmuD3e-1063.9
NC_003902:3514000:352392035239203524399480Xanthomonas campestris pv. campestris str. ATCC 33913, completepolymerase V subunit3e-1063.9
NC_011894:7109374:711828971182897118744456Methylobacterium nodulans ORS 2060, complete genomepeptidase S24 and S26 domain protein4e-1063.5
NC_004459:349500:370238370238370651414Vibrio vulnificus CMCP6 chromosome I, complete sequenceSOS-response transcriptional repressor LexA -like protein5e-1063.2
NC_003228:2245181:224994922499492250386438Bacteroides fragilis NCTC 9343, complete genomeputative UmuD/RumA DNA repair protein5e-1063.2
NC_016776:2237404:224094922409492241392444Bacteroides fragilis 638R, complete genomeputative UmuD/RumA DNA repair protein5e-1063.2
NC_006347:2190000:219226021922602192703444Bacteroides fragilis YCH46, complete genomeerror-prone repair: SOS-response transcriptional repressor UmuD homolog5e-1063.2
NC_014365:2037506:204991520499152050538624Desulfarculus baarsii DSM 2075 chromosome, complete genometranscriptional repressor, LexA family8e-1062.4
NC_008255:1701195:171908717190871719515429Cytophaga hutchinsonii ATCC 33406, complete genomepeptidase, S24 family, UV repair protein9e-1062.4
NC_003198:4453457:44737534473753450773033978Salmonella enterica subsp. enterica serovar Typhi str. CT18,2e-0960.8
NC_007963:1552761:156563415656341566074441Chromohalobacter salexigens DSM 3043, complete genomeputative prophage repressor2e-0960.8
NC_015161:1748236:176590817659081766573666Deinococcus proteolyticus MRP chromosome, complete genomeLexA repressor3e-0960.5
NC_015851:10915:328603286033324465Acidithiobacillus caldus SM-1 megaplasmid, complete sequenceSOS-response repressor and protease LexA5e-0960.1
NC_017986:5605197:563727956372795637887609Pseudomonas putida ND6 chromosome, complete genomeLexA repressor3e-0857
NC_007005:2149275:215553921555392155718180Pseudomonas syringae pv. syringae B728a, complete genome4e-0857
NC_012914:1851102:186179618617961862443648Paenibacillus sp. JDR-2, complete genometranscriptional regulator, XRE family4e-0856.6
NC_014720:4170:2587325873283322460Caldicellulosiruptor kronotskyensis 2002 chromosome, completelexa repressor5e-0856.6
NC_009454:1389974:139878913987891399400612Pelotomaculum thermopropionicum SI, complete genomeSOS-response transcriptional repressors5e-0856.2
NC_014830:1602198:160219816021981602941744Intrasporangium calvum DSM 43043 chromosome, complete genomeSOS-response transcriptional repressor, LexA6e-0856.2
NC_002939:47406:511435114351748606Geobacter sulfurreducens PCA, complete genomeLexA repressor7e-0855.8
NC_009997:2352948:237442223744222374697276Shewanella baltica OS195, complete genomehypothetical protein9e-0855.5
NC_014815:4385759:440488444048844405636753Micromonospora sp. L5 chromosome, complete genometranscriptional repressor, lexa family9e-0855.5
NC_011830:2901346:291643429164342917048615Desulfitobacterium hafniense DCB-2, complete genomeSOS-response transcriptional repressor, LexA1e-0755.5
NC_017322:1360764:136305813630581363774717Sinorhizobium meliloti BL225C chromosome, complete genomeSOS-response transcriptional repressor, LexA1e-0755.1
NC_020211:2123819:213673021367302137125396Serratia marcescens WW4, complete genomeSOS mutagenesis and repair protein UmuD2e-0754.7
NC_018867:677848:682903682903683529627Dehalobacter sp. CF chromosome, complete genomeSOS-response repressor and protease LexA2e-0754.7
NC_018866:611588:618459618459619085627Dehalobacter sp. DCA chromosome, complete genomeSOS-response repressor and protease LexA2e-0754.7
NC_011894:5056901:507563950756395076154516Methylobacterium nodulans ORS 2060, complete genomepeptidase S24 and S26 domain protein2e-0754.7
NC_016832:948029:979172979172979411240Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Protein umuD'3e-0753.9
NC_017046:2026672:203809220380922038331240Salmonella enterica subsp. enterica serovar Typhimurium str. 798DNA repair protein3e-0753.9
NC_015565:1511426:152261415226141523255642Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeSOS-response transcriptional repressor LexA3e-0753.9
NC_007404:1570000:157077515707751571560786Thiobacillus denitrificans ATCC 25259, complete genomepeptidase S24, LexA repressor4e-0753.5
NC_012034:6469:3152031520339792460Anaerocellum thermophilum DSM 6725, complete genomeLexA repressor4e-0753.5
NC_013939:441921:457651457651458241591Deferribacter desulfuricans SSM1, complete genomeSOS-response transcriptional repressor5e-0753.1
NC_020911:1859210:188108418810841881518435Octadecabacter antarcticus 307, complete genomeUV-repair and mutation protein UmuD7e-0752.8
NC_015437:1066014:107508110750811075695615Selenomonas sputigena ATCC 35185 chromosome, complete genomeSOS-response transcriptional repressor, LexA7e-0752.8
NC_020301:853267:854815854815855528714Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomeLexA repressor1e-0652
NC_015660:739040:741988741988742608621Geobacillus thermoglucosidasius C56-YS93 chromosome, completephage repressor like XRE family transcriptional regulator1e-0651.6
NC_014006:850763:854605854605855291687Sphingobium japonicum UT26S chromosome 1, complete genomerepressor LexA1e-0651.6
NC_021182:2667408:267321526732152673826612Clostridium pasteurianum BC1, complete genomeSOS regulatory protein LexA1e-0651.6
NC_017094:1703000:170967817096781710361684Leptospirillum ferrooxidans C2-3, complete genomeLexA repressor2e-0650.8
NC_008609:1976403:204977120497712050373603Pelobacter propionicus DSM 2379, complete genomeSOS-response transcriptional repressor, LexA2e-0650.8
NC_013730:2359939:239184123918412392086246Spirosoma linguale DSM 74, complete genomeSOS-response transcriptional repressors (RecA- mediated autopeptidase)-like protein3e-0650.4
NC_014910:1200605:121068612106861211267582Alicycliphilus denitrificans BC chromosome, complete genomelexa repressor5e-0649.7
NC_012918:2896671:291377829137782914383606Geobacter sp. M21 chromosome, complete genomeSOS-response transcriptional repressor, LexA6e-0649.7
NC_011146:603429:607937607937608686750Geobacter bemidjiensis Bem, complete genometranscriptional repressor, LexA family8e-0649.3
NC_011146:1998981:202611320261132026718606Geobacter bemidjiensis Bem, complete genometranscriptional repressor, LexA family1e-0548.9