Pre_GI: BLASTP Hits

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Query: NC_006905:1342474:1354892 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 1354892, End: 1355857, Length: 966

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010067:1655815:1680246168024616813131068Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-165580
NC_012491:1293086:129942012994201300349930Brevibacillus brevis NBRC 100599, complete genomehypothetical protein5e-1272
NC_010981:712843:714947714947715906960Wolbachia pipientis, complete genomePeptidase S66 family protein1e-0963.9
NC_015425:2690448:269347726934772694394918Clostridium botulinum BKT015925 chromosome, complete genomemccF-like protein3e-0963.2
NC_012779:261438:2709802709802721671188Edwardsiella ictaluri 93-146, complete genomepeptidase, U61 family8e-0961.6
NC_008593:2457594:245862024586202459537918Clostridium novyi NT, complete genomemccF-like protein8e-0961.6
NC_010520:35845:764517645177359909Clostridium botulinum A3 str. Loch Maree, complete genomeLD-carboxypeptidase family protein3e-0859.3
NC_009495:38000:826658266583573909Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeLD-carboxypeptidase7e-0858.5
NC_009697:38000:754687546876376909Clostridium botulinum A str. ATCC 19397 chromosome, completeLD-carboxypeptidase family protein7e-0858.5
NC_009698:38000:754697546976377909Clostridium botulinum A str. Hall chromosome, complete genomeLD-carboxypeptidase7e-0858.5
NC_012658:35500:765687656877476909Clostridium botulinum Ba4 str. 657 chromosome, complete genomeLD-carboxypeptidase family protein6e-0858.5
NC_012563:36000:765907659077498909Clostridium botulinum A2 str. Kyoto, complete genomeLD-carboxypeptidase family protein5e-0858.5
NC_009706:3845039:384794238479423848856915Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein8e-0858.2
NC_011837:3776541:377943537794353780358924Clostridium kluyveri NBRC 12016, complete genomehypothetical protein9e-0857.8
NC_015687:303810:349278349278350198921Clostridium acetobutylicum DSM 1731 chromosome, complete genomeMccF-like protein1e-0757.4
NC_003030:303812:349282349282350202921Clostridium acetobutylicum ATCC 824, complete genomeMccF-like protein1e-0757.4
NC_017297:33519:776277762778535909Clostridium botulinum F str. 230613 chromosome, complete genomeLD-carboxypeptidase family protein1e-0757.4
NC_009699:33452:773597735978267909Clostridium botulinum F str. Langeland chromosome, complete genomeLD-carboxypeptidase family protein1e-0757.4
NC_010516:42475:823228232283230909Clostridium botulinum B1 str. Okra, complete genomeLD-carboxypeptidase family protein1e-0654.3