Pre_GI: BLASTP Hits

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Query: NC_006814:1538175:1538175 Lactobacillus acidophilus NCFM, complete genome

Start: 1538175, End: 1540847, Length: 2673

Host Lineage: Lactobacillus acidophilus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This organism is a normal inhabitant of the human intestinal tract. This strain was isolated from a human in 1970. Normal gastrointestinal bacterium. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This organism has been studied for its ability to help the human gut maintain its natural microbial community. Strains of this organism are also used in the production of yogurt, cheese and other fermented foods.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014727:1485656:1485656148565614883192664Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,DNA polymerase i01311
NC_006449:1572000:1572077157207715747162640Streptococcus thermophilus CNRZ1066, complete genomeDNA polymerase I0932
NC_006448:1568000:1568515156851515711542640Streptococcus thermophilus LMG 18311, complete genomeDNA polymerase I0932
NC_011772:4487378:4516928451692845195612634Bacillus cereus G9842, complete genomeDNA polymerase I0829
NC_008262:2150944:2166242216624221688422601Clostridium perfringens SM101, complete genomeDNA polymerase I0686
NC_008261:2481500:2496982249698224995822601Clostridium perfringens ATCC 13124, complete genomeDNA polymerase I0686
NC_003366:2266757:2283149228314922857492601Clostridium perfringens str. 13, complete genomeDNA polymerase I0684
NC_013171:1420135:1420135142013514227742640Anaerococcus prevotii DSM 20548, complete genomeDNA polymerase I0683
NC_021182:2059143:2078590207859020812022613Clostridium pasteurianum BC1, complete genomeDNA polymerase I0666
NC_016012:236012:2534252534252560072583Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeDNA polymerase I2e-179629
NC_016048:2678205:2678205267820526808592655Oscillibacter valericigenes Sjm18-20, complete genomeDNA polymerase I2e-175617
NC_015144:1284453:1300616130061613034412826Weeksella virosa DSM 16922 chromosome, complete genomeDNA polymerase I6e-168592
NC_014830:1871135:1871633187163318743082676Intrasporangium calvum DSM 43043 chromosome, complete genomeDNA polymerase I9e-160564
NC_013170:917177:9373659373659400222658Cryptobacterium curtum DSM 15641, complete genomeDNA polymerase I9e-160564
NC_013510:3324978:3326383332638333291032721Thermomonospora curvata DSM 43183, complete genomeDNA polymerase I7e-159561
NC_008705:3201817:3199074319907432018362763Mycobacterium sp. KMS, complete genomeDNA polymerase I5e-158558
NC_008260:2992813:3005056300505630079262871Alcanivorax borkumensis SK2, complete genomeDNA polymerase I4e-157555
NC_012704:947409:9595609595609623372778Corynebacterium kroppenstedtii DSM 44385, complete genomeDNA polymerase I1e-155550
NC_007484:580106:5975875975876002982712Nitrosococcus oceani ATCC 19707, complete genomeDNA polymerase A2e-155550
NC_013521:2254534:2254534225453422572392706Sanguibacter keddieii DSM 10542, complete genomeDNA polymerase I1e-153544
NC_008255:4208913:4221386422138642242262841Cytophaga hutchinsonii ATCC 33406, complete genomeDNA polymerase I3e-153543
NC_018524:4049990:4075781407578140785432763Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeDNA polymerase I family protein3e-151536
NC_011661:906583:9081099081099106762568Dictyoglomus turgidum DSM 6724, complete genomeDNA polymerase I9e-150531
NC_010410:3166279:3189431318943131922022772Acinetobacter baumannii AYE, complete genome 5' polymerase, 5'--> 3' and 3'--> 5' exonuclease' target='_blank' title='Search database for similar gene annotations'>DNA polymerase I, 3'--> 5' polymerase, 5'--> 3' and 3'--> 5' exonuclease1e-148528
NC_016940:3632974:3635512363551236382952784Saprospira grandis str. Lewin chromosome, complete genomeDNA polymerase I6e-148525
NC_012997:59407:7455674556772822727Teredinibacter turnerae T7901, complete genomeDNA polymerase I2e-147523
NC_014722:846084:8976038976039003862784Burkholderia rhizoxinica HKI 454, complete genomeDNA polymerase I1e-146520
NC_005085:786851:8025748025748053602787Chromobacterium violaceum ATCC 12472, complete genomeDNA-directed DNA polymerase I8e-145514
NC_012721:2021885:2021885202188520246382754Burkholderia glumae BGR1 chromosome 2, complete genomeDNA polymerase I1e-141504
NC_015696:610000:6141616141616168512691Francisella sp. TX077308 chromosome, complete genomeDNA polymerase I4e-140499
NC_014375:217612:2305332305332335172985Brevundimonas subvibrioides ATCC 15264 chromosome, complete genomeDNA polymerase I6e-139495
NC_014623:6095658:6117477611747761201762700Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeDNA polymerase I3e-138493
NC_008577:4907497:4931315493131549340832769Shewanella sp. ANA-3 chromosome 1, complete sequenceDNA polymerase I1e-137491
NC_008321:4631866:4655692465569246584602769Shewanella sp. MR-4, complete genomeDNA polymerase I1e-136487
NC_018644:446102:4504004504004530782679Alpha proteobacterium HIMB59 chromosome, complete genomeDNA-directed DNA polymerase9e-136484
NC_014011:1264165:1281679128167912842432565Aminobacterium colombiense DSM 12261 chromosome, complete genomeDNA polymerase I1e-135484
NC_014330:2520906:2539845253984525426402796Brachyspira pilosicoli 95/1000 chromosome, complete genomeDNA polymerase I1e-133478
NC_018604:1489567:1511338151133815141152778Brachyspira pilosicoli WesB complete genomeDNA polymerase I1e-133477
NC_018607:1251357:1272547127254712753242778Brachyspira pilosicoli B2904 chromosome, complete genomeDNA polymerase I4e-133476
NC_004842:1081271:1082130108213010847242595Anaplasma marginale str. St. Maries, complete genomeDNA polymerase I3e-129463
NC_003454:1346500:1362209136220913649442736Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeDNA polymerase I2e-123444
NC_007797:1451804:12212226832562Anaplasma phagocytophilum HZ, complete genomeDNA polymerase I4e-122439
NC_007519:3391090:3409221340922134120162796Desulfovibrio alaskensis G20 chromosome, complete genomeDNA polymerase I2e-116421
NC_013939:1995546:1995546199554619979152370Deferribacter desulfuricans SSM1, complete genomeDNA polymerase I2e-105384
NC_014010:1392536:1392536139253613954662931Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeDNA polymerase I6e-103375
NC_010725:2589014:2608552260855226116953144Methylobacterium populi BJ001, complete genomeDNA polymerase I1e-98361
NC_015672:470000:4701754701754725562382Flexistipes sinusarabici DSM 4947 chromosome, complete genomeDNA polymerase I1e-97358
NC_008025:1768756:1770264177026417729872724Deinococcus geothermalis DSM 11300, complete genomeDNA polymerase I2e-96354
NC_017268:107387:1157661157661188133048Treponema pallidum subsp. pallidum str. Chicago chromosome,DNA polymerase I8e-94345
NC_000919:107373:1158061158061187992994Treponema pallidum subsp. pallidum str. Nichols, complete genomeDNA polymerase I (polA)7e-94345
NC_010741:107370:1158031158031187962994Treponema pallidum subsp. pallidum SS14, complete genomeDNA polymerase I7e-94345
NC_016844:107382:1158151158151188082994Treponema pallidum subsp. pallidum DAL-1 chromosome, completeDNA-directed DNA polymerase I7e-94345
NC_021508:107384:1158171158171188102994Treponema pallidum subsp. pallidum SS14, complete genomeDNA-directed DNA polymerase I7e-94345
NC_009342:1538000:1557629155762915602712643Corynebacterium glutamicum R chromosome, complete genomeDNA polymerase I1e-92342
NC_003450:1395565:1413820141382014164622643Corynebacterium glutamicum ATCC 13032, complete genomeDNA polymerase I1e-92341
NC_015953:1581542:1586276158627615889872712Streptomyces sp. SirexAA-E chromosome, complete genomeDNA polymerase I1e-91338
NC_021177:1736854:1739716173971617423732658Streptomyces fulvissimus DSM 40593, complete genomeDNA polymerase I2e-90334
NC_013124:1107202:1123306112330611259662661Acidimicrobium ferrooxidans DSM 10331, complete genomeDNA polymerase I1e-89332
NC_014643:1986440:2028899202889920317662868Rothia dentocariosa ATCC 17931 chromosome, complete genomeDNA-directed DNA polymerase I2e-89330
NC_017277:3083494:3102959310295931059192961Synechocystis sp. PCC 6803, complete genomeDNA polymerase I2e-88327
NC_000911:3075896:3104142310414231071022961Synechocystis sp. PCC 6803, complete genomeDNA polymerase I2e-88327
NC_016629:415711:4182324182324208802649Desulfovibrio africanus str. Walvis Bay chromosome, completeDNA polymerase I2e-87324
NC_007798:586500:5907025907025931912490Neorickettsia sennetsu str. Miyayama, complete genomeDNA polymerase I1e-81305
NC_013009:608515:6085156085156109652451Neorickettsia risticii str. Illinois, complete genomeDNA polymerase I1e-79298
NC_010544:850502:8505028505028525322031Candidatus Phytoplasma australiense, complete genomeDNA polymerase I2e-57224
NC_016627:4323370:4362009436200943639311923Clostridium clariflavum DSM 19732 chromosome, complete genomeDNA polymerase I family protein2e-54215
NC_009012:1934107:1975291197529119772131923Clostridium thermocellum ATCC 27405, complete genomeDNA-directed DNA polymerase1e-54215
NC_010337:2848360:2848360284836028502971938Heliobacterium modesticaldum Ice1, complete genomeDNA polymerase i3e-54214
NC_010730:1519458:153956215395621540461900Sulfurihydrogenibium sp. YO3AOP1, complete genome5'-3' exonuclease6e-50199
NC_014639:1894500:1912736191273619150992364Bacillus atrophaeus 1942 chromosome, complete genomeDNA-directed DNA polymerase6e-49196
CP002207:1894500:1912736191273619150992364Bacillus atrophaeus 1942, complete genomeDNA-directed DNA polymerase6e-49196
NC_016771:1575000:157502815750281575894867Bacillus cereus NC7401, complete genome5'-3' exonuclease2e-48194
NC_017191:1173989:132416513241651325052888Bacillus amyloliquefaciens XH7 chromosome, complete genome5'-3' exonuclease2e-45184
NC_017188:1172181:132258813225881323475888Bacillus amyloliquefaciens TA208 chromosome, complete genome5'3'-exonuclease2e-45184
NC_007168:1494725:149818514981851499063879Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein2e-43177
NC_002952:1497785:154115715411571542035879Staphylococcus aureus subsp. aureus MRSA252, complete genomeputative 5'-3' exonuclease5e-41170
NC_019772:169269:2170632170632188771815Anabaena cylindrica PCC 7122 plasmid pANACY.01, complete sequenceDNA-directed DNA polymerase6e-41169
NC_011146:896000:9102609102609116841425Geobacter bemidjiensis Bem, complete genomeribonuclease H7e-41169
NC_017338:1419500:146226514622651463143879Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeexonuclease7e-41169
NC_013450:1446952:149007714900771490955879Staphylococcus aureus subsp. aureus ED98, complete genome5'-3' exonuclease, putative7e-41169
NC_017208:1831918:1850299185029918527252427Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeDNA polymerase I1e-40169
NC_002976:1021490:105432410543241055202879Staphylococcus epidermidis RP62A, complete genome5'-3' exonuclease, putative2e-40168
NC_004461:1132670:116626511662651167143879Staphylococcus epidermidis ATCC 12228, complete genomeputative 5'-3' exonuclease2e-40168
NC_010079:1465356:150805015080501508928879Staphylococcus aureus subsp. aureus USA300_TCH1516, complete5'-3' exonuclease3e-40167
NC_004722:1804788:1819850181985018222582409Bacillus cereus ATCC 14579, complete genomeDNA polymerase I5e-40167
NC_020164:1356798:136026313602631361141879Staphylococcus warneri SG1, complete genomeputative 5'-3' exonuclease5e-40167
NC_008609:975867:9943869943869958341449Pelobacter propionicus DSM 2379, complete genomeribonuclease H4e-37157
NC_012673:1:84768476110372562Exiguobacterium sp. AT1b, complete genomeDNA-directed DNA polymerase5e-36153
NC_006055:44649:689656896569918954Mesoplasma florum L1, complete genome5'-3' exonuclease9e-36152
NC_015557:30622:344363443635335900Hydrogenobaculum sp. 3684 chromosome, complete genome5'-3' exonuclease, resolvase-like domain-containing protein5e-35150
NC_015587:28997:344723447235371900Hydrogenobaculum sp. SHO chromosome, complete genome5'-3' exonuclease, resolvase-like domain-containing protein5e-35150
NC_020411:28995:344703447035369900Hydrogenobaculum sp. HO, complete genome5'-3' exonuclease, N-terminal resolvase-like domain containing protein5e-35150
NC_007907:4956500:4957631495763149593671737Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-33144
NC_011830:1037520:1061824106182410635751752Desulfitobacterium hafniense DCB-2, complete genomeDNA-directed DNA polymerase4e-33144
NC_013093:2471574:2500259250025925013081050Actinosynnema mirum DSM 43827, complete genome5'-3' exonuclease1e-29132
NC_004829:312750:330569330569331465897Mycoplasma gallisepticum R, complete genomeExo2e-29131
NC_016602:3122700:3140667314066731426972031Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceDNA polymerase I2e-29131
NC_009921:4948500:495861549586154959571957Frankia sp. EAN1pec, complete genome5'-3' exonuclease1e-28129
NC_014165:2081914:210117121011712102115945Thermobispora bispora DSM 43833 chromosome, complete genome5'-3' exonuclease1e-28129
NC_016109:7631165:7649677764967776506781002Kitasatospora setae KM-6054, complete genomeputative 5'-3' exonuclease7e-28126
NC_007777:2638580:265326326532632654246984Frankia sp. CcI3, complete genome5'-3' exonuclease5e-27123
NC_009953:2727669:2730498273049827315591062Salinispora arenicola CNS-205 chromosome, complete genome5'-3' exonuclease5e-27123
NC_009380:2548878:255175925517592552706948Salinispora tropica CNB-440 chromosome, complete genome5'-3' exonuclease1e-26122
NC_015656:2795784:281785528178552818829975Frankia symbiont of Datisca glomerata chromosome, complete genome5'-3' exonuclease6e-26120
NC_015848:2381148:2402606240260624038441239Mycobacterium canettii CIPT 140010059, complete genomeputative 5'-3' exonuclease4e-25117
NC_008595:2432184:243582224358222436763942Mycobacterium avium 104, complete genome5'-3' exonuclease7e-24113
NC_013947:3347174:335496133549613355872912Stackebrandtia nassauensis DSM 44728 chromosome, complete genome5'-3' exonuclease2e-23111
NC_009092:3239500:326052032605203261290771Shewanella loihica PV-4, complete genome5'-3' exonuclease3e-21104
NC_016111:1766010:1773246177324617750421797Streptomyces cattleya NRRL 8057, complete genomeDNA polymerase6e-1996.7
NC_008321:3232000:324174832417483242530783Shewanella sp. MR-4, complete genome5'-3' exonuclease8e-1996.3
NC_008278:4023918:4034521403452140356901170Frankia alni ACN14a, complete genomeputative 5'-3' exonuclease5e-1894
NC_015656:4367764:4378358437835843801841827Frankia symbiont of Datisca glomerata chromosome, complete genomeDNA-directed DNA polymerase2e-1688.6
NC_015942:2943127:294405029440502945015966Acidithiobacillus ferrivorans SS3 chromosome, complete genome5'-3' exonuclease2e-1482
NC_008530:1454118:1462573146257314645071935Lactobacillus gasseri ATCC 33323, complete genomeDNA polymerase I - 3'-5' exonuclease and polymerase domain8e-1376.6
NC_007498:919697:9437799437799455601782Pelobacter carbinolicus DSM 2380, complete genomeDNA polymerase I - 3'-5' exonuclease and polymerase domains1e-1172.4
NC_015697:506494:5136925136925156261935Lactobacillus reuteri SD2112 chromosome, complete genomeprophage LambdaSa04 DNA-directed DNA polymerase3e-1171.2
NC_012563:2680246:2687749268774926897161968Clostridium botulinum A2 str. Kyoto, complete genomeDNA polymerase2e-1068.6
NC_017294:115500:1222441222441241631920Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomeDNA-directed DNA polymerase5e-1067.4
NC_007434:1712000:1750026175002617523502325Burkholderia pseudomallei 1710b chromosome I, complete sequence38L6e-1067
NC_004838:51013:956469564696641996Yersinia pestis KIM plasmid pMT-1, complete sequencehypothetical protein8e-1066.6
NC_015697:468234:4727004727004746341935Lactobacillus reuteri SD2112 chromosome, complete genomeprophage LambdaSa04 DNA-directed DNA polymerase1e-0966.2
NC_010337:2848360:2884739288473928866791941Heliobacterium modesticaldum Ice1, complete genomeDNA polymerase i, putative2e-0965.5
NC_012796:4075583:4111509411150941160324524Desulfovibrio magneticus RS-1, complete genomehypothetical protein1e-0863.2
NC_013169:1058463:1076690107669010784531764Kytococcus sedentarius DSM 20547, complete genomeDNA polymerase I family protein with 3'-5'-exonuclease and polymerase domains2e-0862.4
NC_007432:654904:6639736639736659281956Streptococcus agalactiae A909, complete genomeprophage LambdaSa04, DNA polymerase2e-0862
NC_017030:5558429:5618215561821556199661752Corallococcus coralloides DSM 2259 chromosome, complete genomeDNA polymerase I, thermostable4e-0860.8
NC_009633:4097536:4104091410409141060401950Alkaliphilus metalliredigens QYMF chromosome, complete genomeDNA-directed DNA polymerase8e-0860.1
NC_009937:4122652:4127616412761641294451830Azorhizobium caulinodans ORS 571, complete genomeDNA polymerase2e-0758.9
NC_017191:1173989:1289517128951712918082292Bacillus amyloliquefaciens XH7 chromosome, complete genomeDNA polymerase I7e-0757
NC_017188:1172181:1287940128794012902312292Bacillus amyloliquefaciens TA208 chromosome, complete genomeDNA polymerase I7e-0757