Pre_GI Gene

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Host: NC_000919 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_000919:107373 Treponema pallidum subsp. pallidum str. Nichols, complete genome

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was originally isolated in 1912 from a neurosyphilitic patient and is virulent. This organism is the causative agent of endemic and venereal syphilis. This sexual transmitted disease was first discovered in Europe at the end of the fifteenth century, however, the causative agent was not identified until 1905. At one time syphilis was the third most commonly reported communicable disease in the USA. Syphilis is characterized by multiple clinical stages and long periods of latent, asymptomatic infection. Although effective therapies have been available since the introduction of penicillin, syphilis remains a global health problem. This organisms is divided into subspecies each of which causes a specific disease. T. pallidum causes the venereal disease syphilis. T. pertenue, T. carateum and T. endemicum cause the skin infections yaws, pinta and bejel, respectively.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
107373108128756uridylate kinaseQuickGO ontologyBLASTP
108323108925603thioredoxin putativeQuickGO ontologyBLASTP
108918109712795cytochrome c biogenesis protein ccdAQuickGO ontologyBLASTP
1097501117231974rep helicase single-stranded DNA-dependent ATPase repQuickGO ontologyBLASTP
1117881136111824ATP-dependent DNA helicase putativeQuickGO ontologyBLASTP
11385811563917825-nucleotidase ushAQuickGO ontologyBLASTP
1158061187992994DNA polymerase I polAQuickGO ontologyBLASTP
1188311203631533carnitine transporter putativeQuickGO ontologyBLASTP
1203441219211578licC protein licCQuickGO ontologyBLASTP
1222751236601386diphosphate--fructose-6-phosphate 1-phosphotransferaseQuickGO ontologyBLASTP
123762124640879rRNA methylase putativeQuickGO ontologyBLASTP
1251811269141734hypothetical proteinBLASTP
1269741284011428RNA polymerase sigma-54 factor rpoNQuickGO ontologyBLASTP
1283981297501353aminopeptidase C pepCQuickGO ontologyBLASTP
129892130878987Lambda CII stability-governing protein hflKQuickGO ontologyBLASTP