Pre_GI: BLASTP Hits

Some Help

Query: NC_000919:107373:115806 Treponema pallidum subsp. pallidum str. Nichols, complete genome

Start: 115806, End: 118799, Length: 2994

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was originally isolated in 1912 from a neurosyphilitic patient and is virulent. This organism is the causative agent of endemic and venereal syphilis. This sexual transmitted disease was first discovered in Europe at the end of the fifteenth century, however, the causative agent was not identified until 1905. At one time syphilis was the third most commonly reported communicable disease in the USA. Syphilis is characterized by multiple clinical stages and long periods of latent, asymptomatic infection. Although effective therapies have been available since the introduction of penicillin, syphilis remains a global health problem. This organisms is divided into subspecies each of which causes a specific disease. T. pallidum causes the venereal disease syphilis. T. pertenue, T. carateum and T. endemicum cause the skin infections yaws, pinta and bejel, respectively.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017268:107387:1157661157661188133048Treponema pallidum subsp. pallidum str. Chicago chromosome,DNA polymerase I02033
NC_021508:107384:1158171158171188102994Treponema pallidum subsp. pallidum SS14, complete genomeDNA-directed DNA polymerase I02031
NC_016844:107382:1158151158151188082994Treponema pallidum subsp. pallidum DAL-1 chromosome, completeDNA-directed DNA polymerase I02031
NC_010741:107370:1158031158031187962994Treponema pallidum subsp. pallidum SS14, complete genomeDNA polymerase I02031
NC_018604:1489567:1511338151133815141152778Brachyspira pilosicoli WesB complete genomeDNA polymerase I3e-177622
NC_014330:2520906:2539845253984525426402796Brachyspira pilosicoli 95/1000 chromosome, complete genomeDNA polymerase I4e-177622
NC_018607:1251357:1272547127254712753242778Brachyspira pilosicoli B2904 chromosome, complete genomeDNA polymerase I5e-177622
NC_015144:1284453:1300616130061613034412826Weeksella virosa DSM 16922 chromosome, complete genomeDNA polymerase I3e-168593
NC_014010:1392536:1392536139253613954662931Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeDNA polymerase I2e-163577
NC_015696:610000:6141616141616168512691Francisella sp. TX077308 chromosome, complete genomeDNA polymerase I8e-159561
NC_016940:3632974:3635512363551236382952784Saprospira grandis str. Lewin chromosome, complete genomeDNA polymerase I4e-154546
NC_008255:4208913:4221386422138642242262841Cytophaga hutchinsonii ATCC 33406, complete genomeDNA polymerase I5e-152539
NC_014375:217612:2305332305332335172985Brevundimonas subvibrioides ATCC 15264 chromosome, complete genomeDNA polymerase I4e-151536
NC_010725:2589014:2608552260855226116953144Methylobacterium populi BJ001, complete genomeDNA polymerase I1e-149531
NC_012997:59407:7455674556772822727Teredinibacter turnerae T7901, complete genomeDNA polymerase I7e-149528
NC_010410:3166279:3189431318943131922022772Acinetobacter baumannii AYE, complete genome 5' polymerase, 5'--> 3' and 3'--> 5' exonuclease' target='_blank' title='Search database for similar gene annotations'>DNA polymerase I, 3'--> 5' polymerase, 5'--> 3' and 3'--> 5' exonuclease1e-148527
NC_014722:846084:8976038976039003862784Burkholderia rhizoxinica HKI 454, complete genomeDNA polymerase I2e-136487
NC_017277:3083494:3102959310295931059192961Synechocystis sp. PCC 6803, complete genomeDNA polymerase I2e-129464
NC_000911:3075896:3104142310414231071022961Synechocystis sp. PCC 6803, complete genomeDNA polymerase I2e-129464
NC_007484:580106:5975875975876002982712Nitrosococcus oceani ATCC 19707, complete genomeDNA polymerase A4e-117423
NC_005085:786851:8025748025748053602787Chromobacterium violaceum ATCC 12472, complete genomeDNA-directed DNA polymerase I2e-113410
NC_008260:2992813:3005056300505630079262871Alcanivorax borkumensis SK2, complete genomeDNA polymerase I4e-112406
NC_008577:4907497:4931315493131549340832769Shewanella sp. ANA-3 chromosome 1, complete sequenceDNA polymerase I3e-109397
NC_008321:4631866:4655692465569246584602769Shewanella sp. MR-4, complete genomeDNA polymerase I4e-108393
NC_021182:2059143:2078590207859020812022613Clostridium pasteurianum BC1, complete genomeDNA polymerase I6e-106386
NC_012721:2021885:2021885202188520246382754Burkholderia glumae BGR1 chromosome 2, complete genomeDNA polymerase I1e-102374
NC_011661:906583:9081099081099106762568Dictyoglomus turgidum DSM 6724, complete genomeDNA polymerase I2e-101370
NC_003366:2266757:2283149228314922857492601Clostridium perfringens str. 13, complete genomeDNA polymerase I6e-101369
NC_008262:2150944:2166242216624221688422601Clostridium perfringens SM101, complete genomeDNA polymerase I2e-100368
NC_008261:2481500:2496982249698224995822601Clostridium perfringens ATCC 13124, complete genomeDNA polymerase I2e-100367
NC_013171:1420135:1420135142013514227742640Anaerococcus prevotii DSM 20548, complete genomeDNA polymerase I1e-99365
NC_011772:4487378:4516928451692845195612634Bacillus cereus G9842, complete genomeDNA polymerase I4e-99363
NC_014623:6095658:6117477611747761201762700Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeDNA polymerase I6e-98359
NC_013170:917177:9373659373659400222658Cryptobacterium curtum DSM 15641, complete genomeDNA polymerase I2e-94348
NC_014727:1485656:1485656148565614883192664Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,DNA polymerase i2e-93344
NC_013939:1995546:1995546199554619979152370Deferribacter desulfuricans SSM1, complete genomeDNA polymerase I3e-93343
NC_016048:2678205:2678205267820526808592655Oscillibacter valericigenes Sjm18-20, complete genomeDNA polymerase I3e-93343
NC_007519:3391090:3409221340922134120162796Desulfovibrio alaskensis G20 chromosome, complete genomeDNA polymerase I1e-91338
NC_012704:947409:9595609595609623372778Corynebacterium kroppenstedtii DSM 44385, complete genomeDNA polymerase I8e-92338
NC_006814:1538175:1538175153817515408472673Lactobacillus acidophilus NCFM, complete genomeDNA polymerase I2e-91337
NC_008025:1768756:1770264177026417729872724Deinococcus geothermalis DSM 11300, complete genomeDNA polymerase I2e-91337
NC_014830:1871135:1871633187163318743082676Intrasporangium calvum DSM 43043 chromosome, complete genomeDNA polymerase I3e-89330
NC_016012:236012:2534252534252560072583Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeDNA polymerase I4e-89330
NC_018644:446102:4504004504004530782679Alpha proteobacterium HIMB59 chromosome, complete genomeDNA-directed DNA polymerase1e-88328
NC_013510:3324978:3326383332638333291032721Thermomonospora curvata DSM 43183, complete genomeDNA polymerase I3e-88327
NC_003454:1346500:1362209136220913649442736Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeDNA polymerase I2e-88327
NC_008705:3201817:3199074319907432018362763Mycobacterium sp. KMS, complete genomeDNA polymerase I1e-87325
NC_006449:1572000:1572077157207715747162640Streptococcus thermophilus CNRZ1066, complete genomeDNA polymerase I1e-86322
NC_016629:415711:4182324182324208802649Desulfovibrio africanus str. Walvis Bay chromosome, completeDNA polymerase I1e-86322
NC_006448:1568000:1568515156851515711542640Streptococcus thermophilus LMG 18311, complete genomeDNA polymerase I1e-86322
NC_009342:1538000:1557629155762915602712643Corynebacterium glutamicum R chromosome, complete genomeDNA polymerase I5e-86319
NC_003450:1395565:1413820141382014164622643Corynebacterium glutamicum ATCC 13032, complete genomeDNA polymerase I2e-85317
NC_015672:470000:4701754701754725562382Flexistipes sinusarabici DSM 4947 chromosome, complete genomeDNA polymerase I7e-85316
NC_015953:1581542:1586276158627615889872712Streptomyces sp. SirexAA-E chromosome, complete genomeDNA polymerase I1e-84315
NC_007797:1451804:12212226832562Anaplasma phagocytophilum HZ, complete genomeDNA polymerase I1e-84315
NC_013521:2254534:2254534225453422572392706Sanguibacter keddieii DSM 10542, complete genomeDNA polymerase I9e-84312
NC_018524:4049990:4075781407578140785432763Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeDNA polymerase I family protein4e-83310
NC_004842:1081271:1082130108213010847242595Anaplasma marginale str. St. Maries, complete genomeDNA polymerase I2e-82307
NC_013124:1107202:1123306112330611259662661Acidimicrobium ferrooxidans DSM 10331, complete genomeDNA polymerase I2e-81304
NC_021177:1736854:1739716173971617423732658Streptomyces fulvissimus DSM 40593, complete genomeDNA polymerase I4e-80300
NC_014643:1986440:2028899202889920317662868Rothia dentocariosa ATCC 17931 chromosome, complete genomeDNA-directed DNA polymerase I6e-78293
NC_014011:1264165:1281679128167912842432565Aminobacterium colombiense DSM 12261 chromosome, complete genomeDNA polymerase I5e-73276
NC_007798:586500:5907025907025931912490Neorickettsia sennetsu str. Miyayama, complete genomeDNA polymerase I7e-64246
NC_013009:608515:6085156085156109652451Neorickettsia risticii str. Illinois, complete genomeDNA polymerase I2e-61238
NC_014639:1894500:1912736191273619150992364Bacillus atrophaeus 1942 chromosome, complete genomeDNA-directed DNA polymerase1e-57225
CP002207:1894500:1912736191273619150992364Bacillus atrophaeus 1942, complete genomeDNA-directed DNA polymerase1e-57225
NC_019772:169269:2170632170632188771815Anabaena cylindrica PCC 7122 plasmid pANACY.01, complete sequenceDNA-directed DNA polymerase2e-52208
NC_016627:4323370:4362009436200943639311923Clostridium clariflavum DSM 19732 chromosome, complete genomeDNA polymerase I family protein2e-48194
NC_009012:1934107:1975291197529119772131923Clostridium thermocellum ATCC 27405, complete genomeDNA-directed DNA polymerase1e-47192
NC_010337:2848360:2848360284836028502971938Heliobacterium modesticaldum Ice1, complete genomeDNA polymerase i3e-46187
NC_008609:975867:9943869943869958341449Pelobacter propionicus DSM 2379, complete genomeribonuclease H5e-43177
NC_011830:1037520:1061824106182410635751752Desulfitobacterium hafniense DCB-2, complete genomeDNA-directed DNA polymerase1e-42176
NC_011146:896000:9102609102609116841425Geobacter bemidjiensis Bem, complete genomeribonuclease H2e-42175
NC_007907:4956500:4957631495763149593671737Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-41171
NC_010730:1519458:153956215395621540461900Sulfurihydrogenibium sp. YO3AOP1, complete genome5'-3' exonuclease8e-40166
NC_020411:28995:344703447035369900Hydrogenobaculum sp. HO, complete genome5'-3' exonuclease, N-terminal resolvase-like domain containing protein1e-36155
NC_015587:28997:344723447235371900Hydrogenobaculum sp. SHO chromosome, complete genome5'-3' exonuclease, resolvase-like domain-containing protein1e-36155
NC_015557:30622:344363443635335900Hydrogenobaculum sp. 3684 chromosome, complete genome5'-3' exonuclease, resolvase-like domain-containing protein1e-36155
NC_010544:850502:8505028505028525322031Candidatus Phytoplasma australiense, complete genomeDNA polymerase I5e-35150
NC_017191:1173989:132416513241651325052888Bacillus amyloliquefaciens XH7 chromosome, complete genome5'-3' exonuclease8e-33143
NC_017188:1172181:132258813225881323475888Bacillus amyloliquefaciens TA208 chromosome, complete genome5'3'-exonuclease8e-33143
NC_016771:1575000:157502815750281575894867Bacillus cereus NC7401, complete genome5'-3' exonuclease2e-29131
NC_017208:1831918:1850299185029918527252427Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeDNA polymerase I4e-29130
NC_004722:1804788:1819850181985018222582409Bacillus cereus ATCC 14579, complete genomeDNA polymerase I3e-29130
NC_007168:1494725:149818514981851499063879Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein1e-28129
NC_016111:1766010:1773246177324617750421797Streptomyces cattleya NRRL 8057, complete genomeDNA polymerase2e-27125
NC_004461:1132670:116626511662651167143879Staphylococcus epidermidis ATCC 12228, complete genomeputative 5'-3' exonuclease6e-27123
NC_002976:1021490:105432410543241055202879Staphylococcus epidermidis RP62A, complete genome5'-3' exonuclease, putative6e-27123
NC_010079:1465356:150805015080501508928879Staphylococcus aureus subsp. aureus USA300_TCH1516, complete5'-3' exonuclease1e-26122
NC_013450:1446952:149007714900771490955879Staphylococcus aureus subsp. aureus ED98, complete genome5'-3' exonuclease, putative1e-26122
NC_017338:1419500:146226514622651463143879Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeexonuclease1e-26122
NC_009380:2548878:255175925517592552706948Salinispora tropica CNB-440 chromosome, complete genome5'-3' exonuclease2e-26121
NC_015656:2795784:281785528178552818829975Frankia symbiont of Datisca glomerata chromosome, complete genome5'-3' exonuclease4e-26120
NC_020164:1356798:136026313602631361141879Staphylococcus warneri SG1, complete genomeputative 5'-3' exonuclease4e-26120
NC_009921:4948500:495861549586154959571957Frankia sp. EAN1pec, complete genome5'-3' exonuclease5e-26120
NC_002952:1497785:154115715411571542035879Staphylococcus aureus subsp. aureus MRSA252, complete genomeputative 5'-3' exonuclease6e-26120
NC_007777:2638580:265326326532632654246984Frankia sp. CcI3, complete genome5'-3' exonuclease9e-26119
NC_014165:2081914:210117121011712102115945Thermobispora bispora DSM 43833 chromosome, complete genome5'-3' exonuclease2e-25118
NC_006055:44649:689656896569918954Mesoplasma florum L1, complete genome5'-3' exonuclease2e-24115
NC_009953:2727669:2730498273049827315591062Salinispora arenicola CNS-205 chromosome, complete genome5'-3' exonuclease3e-24114
NC_015848:2381148:2402606240260624038441239Mycobacterium canettii CIPT 140010059, complete genomeputative 5'-3' exonuclease2e-23111
NC_012673:1:84768476110372562Exiguobacterium sp. AT1b, complete genomeDNA-directed DNA polymerase3e-22108
NC_008321:3232000:324174832417483242530783Shewanella sp. MR-4, complete genome5'-3' exonuclease1e-21106
NC_008595:2432184:243582224358222436763942Mycobacterium avium 104, complete genome5'-3' exonuclease2e-21105
NC_004829:312750:330569330569331465897Mycoplasma gallisepticum R, complete genomeExo2e-21105
NC_013947:3347174:335496133549613355872912Stackebrandtia nassauensis DSM 44728 chromosome, complete genome5'-3' exonuclease1e-21105
NC_013093:2471574:2500259250025925013081050Actinosynnema mirum DSM 43827, complete genome5'-3' exonuclease5e-21103
NC_015656:4367764:4378358437835843801841827Frankia symbiont of Datisca glomerata chromosome, complete genomeDNA-directed DNA polymerase9e-21103
NC_016109:7631165:7649677764967776506781002Kitasatospora setae KM-6054, complete genomeputative 5'-3' exonuclease4e-20101
NC_008278:4023918:4034521403452140356901170Frankia alni ACN14a, complete genomeputative 5'-3' exonuclease7e-1997.1
NC_009092:3239500:326052032605203261290771Shewanella loihica PV-4, complete genome5'-3' exonuclease7e-1893.6
NC_016602:3122700:3140667314066731426972031Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceDNA polymerase I9e-1893.2
NC_004838:51013:956469564696641996Yersinia pestis KIM plasmid pMT-1, complete sequencehypothetical protein1e-1276.3
NC_009937:4122652:4127616412761641294451830Azorhizobium caulinodans ORS 571, complete genomeDNA polymerase4e-1067.8
NC_017191:1173989:1289517128951712918082292Bacillus amyloliquefaciens XH7 chromosome, complete genomeDNA polymerase I6e-0860.5
NC_017188:1172181:1287940128794012902312292Bacillus amyloliquefaciens TA208 chromosome, complete genomeDNA polymerase I6e-0860.5
NC_013169:1058463:1076690107669010784531764Kytococcus sedentarius DSM 20547, complete genomeDNA polymerase I family protein with 3'-5'-exonuclease and polymerase domains3e-0758.2
NC_007498:919697:9437799437799455601782Pelobacter carbinolicus DSM 2380, complete genomeDNA polymerase I - 3'-5' exonuclease and polymerase domains5e-0757.4
NC_015942:2943127:294405029440502945015966Acidithiobacillus ferrivorans SS3 chromosome, complete genome5'-3' exonuclease8e-0756.6