Pre_GI: BLASTP Hits

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Query: NC_006177:1060428:1069570 Symbiobacterium thermophilum IAM 14863, complete genome

Start: 1069570, End: 1069917, Length: 348

Host Lineage: Symbiobacterium thermophilum; Symbiobacterium; Shewanellaceae; Clostridiales; Firmicutes; Bacteria

General Information: This symbiotic and thermophilic bacterium was discovered by screening for thermostable tryptanophases in Japanese compost. Cultured growth of this organism requires the presence of another bacterial species, such as a Bacillus or Escherichia coli, which provides diffusable metabolites required for its growth. Pure cultures can be obtained by growing Symbiobacterium thermophilum in a bioreactor, separated from its symbiotic counterpart by a dialysis membrane. Because of its symbiotic nature, it cannot be cultured with conventional methods. Despite a negative reaction for gram stain, this species is placed with the gram-positive bacteria based on 16s phylogenetic analysis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014376:6296:127961279613173378Clostridium saccharolyticum WM1 chromosome, complete genomephosphotransferase system PTS lactose/cellobiose-specific IIA subunit2e-1891.3
NC_016641:2291363:230698523069852307332348Paenibacillus terrae HPL-003 chromosome, complete genomephosphotransferase system PTS lactose/cellobiose-specific IIA subunit2e-1787.8
NC_016641:373623:386416386416386763348Paenibacillus terrae HPL-003 chromosome, complete genomePTS system transporter subunit IIA8e-1372.4
NC_010674:2185704:218949221894922189794303Clostridium botulinum B str. Eklund 17B, complete genomePTS system, Lactose/Cellobiose specific IIA subunit7e-0959.3
NC_018265:75658:897058970590028324Melissococcus plutonius DAT561 plasmid 1, complete sequencephosphotransferase system PTS protein2e-0857.8
NC_012912:1200000:121547512154751215792318Dickeya zeae Ech1591, complete genomephosphotransferase system PTS lactose/cellobiose-specific IIA subunit5e-0856.6
NC_014650:1410790:141599914159991416310312Geobacillus sp. Y4.1MC1 chromosome, complete genomephosphotransferase system PTS lactose/cellobiose-specific subunit IIA1e-0755.5
NC_014377:1985714:199560019956001995917318Thermosediminibacter oceani DSM 16646 chromosome, complete genomephosphotransferase system PTS lactose/cellobiose-specific IIA subunit2e-0754.7
NC_016023:729843:743119743119743445327Bacillus coagulans 36D1 chromosome, complete genomePTS system lactose/cellobiose-specific transporter subunit IIA4e-0753.5
NC_015634:526889:530761530761531093333Bacillus coagulans 2-6 chromosome, complete genomephosphotransferase system PTS lactose/cellobiose-specific IIA subunit4e-0753.5
NC_016845:2781438:278752327875232787837315Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative lactose/cellobiose-specific PTS family enzyme IIA component9e-0752.4
NC_012731:2739964:274605027460502746364315Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative lactose/cellobiose-specific PTS family enzyme IIA component9e-0752.4
NC_014039:1238500:125033412503341250657324Propionibacterium acnes SK137 chromosome, complete genomePTS system, Lactose/Cellobiose specific IIA subunit2e-0651.2
NC_006085:1234587:124829812482981248618321Propionibacterium acnes KPA171202, complete genomePTS cellobiose-specific component IIA2e-0651.2
NC_012912:844339:846754846754847080327Dickeya zeae Ech1591, complete genomephosphotransferase system PTS lactose/cellobiose-specific IIA subunit2e-0650.8
NC_015428:1544728:154853315485331548841309Lactobacillus buchneri NRRL B-30929 chromosome, complete genomehypothetical protein2e-0650.8
NC_016516:1203000:121476212147621215127366Propionibacterium acnes TypeIA2 P.acn33 chromosome, completePTS system, Lactose/Cellobiose specific IIA subunit3e-0650.8
NC_016512:1211653:122331612233161223681366Propionibacterium acnes TypeIA2 P.acn17 chromosome, completePTS system, Lactose/Cellobiose specific IIA subunit3e-0650.8
NC_016511:1212282:122394512239451224310366Propionibacterium acnes TypeIA2 P.acn31 chromosome, completePTS system, Lactose/Cellobiose specific IIA subunit3e-0650.8
NC_008800:4488112:449283044928304493132303Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative phosphotransferase protein3e-0650.4
NC_014551:1279229:130965213096521309966315Bacillus amyloliquefaciens DSM 7, complete genomeLacF5e-0650.1
NC_017190:1196356:122679112267911227105315Bacillus amyloliquefaciens LL3 chromosome, complete genomePTS system lactose-specific transporter subunit IIA5e-0650.1
CU928160:1625535:163418716341871634501315Escherichia coli IAI1 chromosome, complete genomeputative phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit4e-0650.1
NC_011415:1715644:172429617242961724610315Escherichia coli SE11 chromosome, complete genomePTS system cellobiose-specific IIA component4e-0650.1
NC_011741:1625535:163418716341871634501315Escherichia coli IAI1 chromosome, complete genomeputative phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit4e-0650.1
CP002185:1727493:173614517361451736456312Escherichia coli W, complete genomePTS system cellobiose-specific IIA component4e-0650.1
CP002516:2361628:236939923693992369710312Escherichia coli KO11, complete genomephosphotransferase system PTS lactose/cellobiose-specific IIA subunit4e-0650.1
NC_016902:2361628:236939923693992369710312Escherichia coli KO11FL chromosome, complete genomephosphotransferase system PTS lactose/cellobiose-specific IIA subunit4e-0650.1
NC_010498:1615980:162536416253641625675312Escherichia coli SMS-3-5, complete genomePTS system lactose/cellobiose-specific family IIA subunit4e-0650.1
NC_009800:1632585:164027716402771640588312Escherichia coli HS, complete genomePTS system, lactose/cellobiose-specific family, IIA component4e-0650.1
NC_008563:1651270:166139716613971661711315Escherichia coli APEC O1, complete genomePTS system, cellobiose-specific IIA component5e-0649.7
NC_014410:2329838:235151423515142351843330Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,phosphotransferase system PTS lactose/cellobiose-specific IIA subunit5e-0649.7
NC_013891:2643085:265496726549672655269303Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomePTS system, beta-glucoside-specific, IIA component8e-0649.3
NC_003210:2749538:275939027593902759692303Listeria monocytogenes EGD-e, complete genomehypothetical protein8e-0649.3
NC_003212:2837366:284933428493342849636303Listeria innocua Clip11262, complete genomehypothetical protein8e-0649.3
NC_011660:2839201:284861928486192848921303Listeria monocytogenes HCC23 chromosome, complete genomePTS system lichenan-specific transporter subunit IIA8e-0649.3
NC_013766:171889:182204182204182506303Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein8e-0649.3
NC_013768:171889:182204182204182506303Listeria monocytogenes 08-5923, complete genomehypothetical protein8e-0649.3
NC_008800:1090000:109322210932221093569348Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,PTS system N,N'-diacetylchitobiose-specific transporter subunit IIA7e-0649.3
NC_010582:1771591:177295617729561773273318Streptococcus pneumoniae CGSP14, complete genomephosphotransferase system (PTS) cellobiose-specific component IIA, putative6e-0649.3
NC_002973:2701983:271268727126872712989303Listeria monocytogenes str. 4b F2365, complete genomePTS system, beta-glucoside-specific, IIA component8e-0649.3