Pre_GI: BLASTP Hits

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Query: NC_005363:1604337:1617215 Bdellovibrio bacteriovorus HD100, complete genome

Start: 1617215, End: 1618387, Length: 1173

Host Lineage: Bdellovibrio bacteriovorus; Bdellovibrio; Bdellovibrionaceae; Bdellovibrionales; Proteobacteria; Bacteria

General Information: This organism is unique in that it is a bacteriolytic microbe that preys on other gram negative bacteria. It is found throughout soil, sewage, and aquatic environments, and is often associated with biofilms. This organism has a biphasic lifestyle which consists of a free living and motile phase, and an attack phase where the bacterium attaches to a host cell, burrows into the periplasm, and begins to degrade the host from the inside out. The organism sheds its flagellum once it makes irreversible contact with the host, and when it is inside, begins to form a bdelloplast, resulting in degradation of the host cell inner membrane and alteration of its peptidoglycan layer, resulting in a spherical cell. The Bdellovibrio cell elongates until it forms a long coiled structure which then divides, forming many flagellated progeny which continue the degradation of the host cell to propagate the life cycle. The genome encodes a large number of degradative and lytic enzymes which are used to degrade the host organism. The organism has numerous deficiencies in its amino acid biosynthetic pathways, suggesting it utilizes prey metabolites for protein synthesis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015660:391627:4019644019644031421179Geobacillus thermoglucosidasius C56-YS93 chromosome, completeUDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing2e-130466
NC_006510:3133965:3147575314757531487471173Geobacillus kaustophilus HTA426, complete genomeUDP-N-acetylglucosamine-2-epimerase (5.1.3.-)2e-123442
NC_007575:601256:6048556048556060181164Sulfurimonas denitrificans DSM 1251, complete genomeUDP-N-acetylglucosamine 2-epimerase9e-117420
NC_007677:771168:7926937926937938651173Salinibacter ruber DSM 13855, complete genomeUDP-N-acetylglucosamine 2-epimerase7e-115414
NC_010336:1248071:1273187127318712743501164Francisella philomiragia subsp. philomiragia ATCC 25017, completeUDP-N-acetylglucosamine 2-epimerase9e-113407
NC_017187:641822:6489776489776501341158Arcobacter butzleri ED-1, complete genomeUDP-N-acetylglucosamine 2-epimerase4e-112405
NC_011060:514874:5176885176885188511164Pelodictyon phaeoclathratiforme BU-1, complete genomeUDP-N-acetylglucosamine 2-epimerase1e-111403
NC_005139:305420:3203393203393215171179Vibrio vulnificus YJ016 chromosome I, complete sequenceUDP-N-acetylglucosamine 2-epimerase4e-107388
NC_011899:1807365:1812827181282718140081182Halothermothrix orenii H 168, complete genomeUDP-N-acetylglucosamine 2-epimerase4e-103374
NC_015424:3112637:3142680314268031438401161Aeromonas veronii B565 chromosome, complete genomeUDP-N-acetylglucosamine 2-epimerase2e-102372
NC_009656:1994392:2007112200711220082661155Pseudomonas aeruginosa PA7 chromosome, complete genomeUDP-N-acetylglucosamine 2-epimerase3e-102372
NC_005085:4335333:4359845435984543610051161Chromobacterium violaceum ATCC 12472, complete genomeN-acetylglucosamine-6-phosphate 2-epimerase/N-acetylglucosamine-6-phosphatase3e-102372
NC_016745:2913712:2920382292038229215301149Oceanimonas sp. GK1 chromosome, complete genomeUDP-N-acetylglucosamine 2-epimerase1e-100366
NC_016610:1138995:1155647115564711568011155Tannerella forsythia ATCC 43037 chromosome, complete genomeUDP-N-acetyl-D-glucosamine 2-epimerase2e-99362
NC_006512:551312:5807785807785819411164Idiomarina loihiensis L2TR, complete genomeUDP-N-acetylglucosamine 2-epimerase2e-99362
NC_005070:419261:4530044530044541761173Synechococcus sp. WH 8102, complete genomeputative N-acetylglucosamine-6-phosphate 2-epimerase/N-acetyl...3e-99362
NC_015276:3669263:3674602367460236757771176Marinomonas mediterranea MMB-1 chromosome, complete genomeUDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing3e-98358
NC_009783:649500:6562766562766574391164Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein1e-96353
NC_009997:3661083:3684999368499936861681170Shewanella baltica OS195, complete genomeUDP-N-acetylglucosamine 2-epimerase5e-96351
NC_015732:529201:5554265554265565951170Spirochaeta caldaria DSM 7334 chromosome, complete genomeUDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing1e-95350
NC_008700:2788363:2798035279803527992011167Shewanella amazonensis SB2B, complete genomeUDP-N-acetylglucosamine 2-epimerase2e-94346
NC_007626:68925:8715287152883241173Magnetospirillum magneticum AMB-1, complete genomeUDP-N-acetylglucosamine 2-epimerase8e-89327
NC_007406:2615916:2618500261850026197291230Nitrobacter winogradskyi Nb-255, complete genomeUDP-N-acetylglucosamine 2-epimerase9e-88323
NC_008593:980731:9921179921179932651149Clostridium novyi NT, complete genomeUDP-N-acetylglucosamine 2-epimerase2e-84313
NC_009699:2901497:2902198290219829033521155Clostridium botulinum F str. Langeland chromosome, complete genomeUDP-N-acetylglucosamine 2-epimerase4e-81301
NC_010516:2877407:2888976288897628901271152Clostridium botulinum B1 str. Okra, complete genomeUDP-N-acetylglucosamine 2-epimerase2e-80299
NC_015425:1207314:1225560122556012267141155Clostridium botulinum BKT015925 chromosome, complete genomeUDP-N-acetylglucosamine 2-epimerase2e-74280
NC_014387:497883:5511645511645523271164Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeUDP-N-acetylglucosamine 2-epimerase5e-72271
NC_013642:400651:4273334273334285441212Thermotoga naphthophila RKU-10, complete genomeUDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing5e-72271
NC_007955:1664998:1666038166603816671471110Methanococcoides burtonii DSM 6242, complete genomeUDP-N-acetylglucosamine 2-epimerase3e-70265
NC_013922:138246:1633261633261644921167Natrialba magadii ATCC 43099 chromosome, complete genomeUDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing9e-69261
NC_007644:779376:7912667912667924681203Moorella thermoacetica ATCC 39073, complete genomeUDP-N-acetylglucosamine 2-epimerase5e-69261
NC_013508:1289159:1312903131290313140691167Edwardsiella tarda EIB202, complete genomepolysialic acid biosynthesis protein P72e-66253
NC_011748:2324495:2337896233789623390591164Escherichia coli 55989, complete genomeNnaA2e-65249
CU928145:2324495:2337896233789623390591164Escherichia coli 55989 chromosome, complete genomeNnaA2e-65249
NC_011750:3584000:3593643359364335948181176Escherichia coli IAI39 chromosome, complete genomeUDP-N-acetylglucosamine 2-epimerase1e-60234
NC_007946:3289151:3299614329961433007891176Escherichia coli UTI89, complete genomepolysialic acid biosynthesis protein P71e-60234
NC_008563:3362058:3372521337252133736961176Escherichia coli APEC O1, complete genomepolysialic acid biosynthesis protein1e-60234
NC_011742:3277941:3287313328731332884881176Escherichia coli S88 chromosome, complete genomeUDP-N-acetylglucosamine 2-epimerase1e-60234
NC_010498:3291344:3302196330219633033711176Escherichia coli SMS-3-5, complete genomepolysialic acid capsule biosynthesis protein NeuC1e-60233
NC_012779:1286500:1309503130950313105551053Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-59229
NC_013202:1367447:1387012138701213881691158Halomicrobium mukohataei DSM 12286, complete genomeUDP-N-acetylglucosamine 2-epimerase1e-57223
NC_008820:91967:1093291093291104891161Prochlorococcus marinus str. MIT 9303, complete genomeUDP-N-acetylglucosamine 2-epimerase2e-56219
NC_012491:5628000:5643506564350656446781173Brevibacillus brevis NBRC 100599, complete genomeputative UDP-N-acetylglucosamine 2-epimerase1e-48194
NC_008319:171847:1785891785891797191131Synechococcus sp. CC9311, complete genomeUDP-N-acetylglucosamine 2-epimerase2e-47189
NC_010424:14657:2231322313234611149Candidatus Desulforudis audaxviator MP104C, complete genomeUDP-N-acetylglucosamine 2-epimerase8e-47187
NC_011296:463359:4633594633594645041146Thermodesulfovibrio yellowstonii DSM 11347, complete genomeUDP-N-acetylglucosamine 2-epimerase1e-46187
NC_020409:2856481:2868980286898028701341155Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeUDP-N-acetylglucosamine 2-epimerase5e-45182
NC_020304:3447847:3459052345905234601761125Desulfocapsa sulfexigens DSM 10523, complete genomeUDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing3e-45182
NC_015572:1252000:1262186126218612633431158Methylomonas methanica MC09 chromosome, complete genomeUDP-N-acetyl-D-glucosamine 2-epimerase3e-45182
NC_020304:2677372:2707296270729627084471152Desulfocapsa sulfexigens DSM 10523, complete genomeUDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing3e-44179
NC_008576:677128:6802456802456813991155Magnetococcus sp. MC-1, complete genomeUDP-N-acetylglucosamine 2-epimerase1e-41170
NC_007519:3240864:3253693325369332548621170Desulfovibrio alaskensis G20 chromosome, complete genomeUDP-N-acetylglucosamine 2-epimerase2e-39163
NC_011769:2248902:2257737225773722589631227Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeUDP-N-acetylglucosamine 2-epimerase4e-39162
NC_017515:76861:8533785337864701134Neisseria meningitidis M04-240196 chromosome, complete genomeUDP-N-acetylglucosamine 2-epimerase2e-37156
NC_008819:785447:7876077876077887191113Prochlorococcus marinus str. NATL1A, complete genomeUDP-N-acetylglucosamine 2-epimerase1e-1170.9
NC_013204:2826500:2862663286266328637691107Eggerthella lenta DSM 2243, complete genomeUDP-N-acetylglucosamine 2-epimerase1e-1067.8
NC_009922:2766397:2769278276927827704021125Alkaliphilus oremlandii OhILAs, complete genomeUDP-N-acetylglucosamine 2-epimerase5e-1065.9
NC_009348:1475955:1504352150435215054641113Aeromonas salmonicida subsp. salmonicida A449, complete genomeUDP-N-acetylglucosamine 2-epimerase7e-1065.5
NC_012578:936000:9368729368729379901119Vibrio cholerae M66-2 chromosome I, complete sequenceUDP-N-acetylglucosamine 2-epimerase9e-1065.1
NC_012582:997268:1001618100161810027361119Vibrio cholerae O395 chromosome chromosome I, complete sequenceUDP-N-acetylglucosamine 2-epimerase9e-1065.1
NC_016445:452100:4564504564504575681119Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeUDP-N-acetylglucosamine 2-epimerase9e-1065.1
NC_016944:975725:9764789764789775961119Vibrio cholerae IEC224 chromosome I, complete sequenceUDP-N-acetylglucosamine 2-epimerase9e-1065.1
NC_008254:3980327:3989631398963139907401110Mesorhizobium sp. BNC1, complete genomeUDP-N-acetylglucosamine 2-epimerase9e-1065.1
NC_011297:1224749:1246555124655512476971143Dictyoglomus thermophilum H-6-12, complete genomeUDP-N-acetylglucosamine 2-epimerase3e-0963.2
NC_017506:2504746:2511217251121725123501134Marinobacter adhaerens HP15 chromosome, complete genomeUDP-N-acetylglucosamine 2-epimerase5e-0962.4
NC_017270:885179:8883978883978894671071Vibrio cholerae LMA3984-4 chromosome chromosome I, completeUDP-N-acetylglucosamine 2-epimerase1e-0861.2
NC_006270:3627974:3631827363182736329691143Bacillus licheniformis ATCC 14580, complete genomeUDP-N-acetylglucosamine 2-epimerase2e-0860.8
NC_006322:3628143:3631995363199536331371143Bacillus licheniformis ATCC 14580, complete genomeYvyH2e-0860.8
NC_018876:516220:5371655371655382351071Methanolobus psychrophilus R15 chromosome, complete genomeUDP-N-acetylglucosamine 2-epimerase2e-0860.5
NC_016148:1105669:1113323111332311144801158Thermovirga lienii DSM 17291 chromosome, complete genomeUDP-N-Acetylglucosamine 2-epimerase3e-0859.7
NC_019903:3537545:3542989354298935441101122Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,UDP-N-Acetylglucosamine 2-epimerase5e-0859.3
NC_009831:3583856:3594084359408435952231140Shewanella sediminis HAW-EB3, complete genomeUDP-N-acetylglucosamine 2-epimerase7e-0858.9
NC_011662:1211660:1231054123105412321601107Thauera sp. MZ1T, complete genomeUDP-N-acetylglucosamine 2-epimerase9e-0858.5
NC_015571:411156:4279604279604291201161Porphyromonas gingivalis TDC60, complete genomeUDP-N-acetylglucosamine 2-epimerase1e-0757.8
NC_017195:3459567:3463160346316034643021143Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeUDP-N-acetylglucosamine 2-epimerase4e-0756.2
NC_011985:3892630:3921037392103739221581122Agrobacterium radiobacter K84 chromosome 1, complete genomeUDP-N-acetylglucosamine 2-epimerase5e-0755.8
NC_012778:263241:2776122776122787121101Eubacterium eligens ATCC 27750, complete genomeUDP-N-acetylglucosamine 2-epimerase7e-0755.5
NC_016610:1138995:1141075114107511422351161Tannerella forsythia ATCC 43037 chromosome, complete genomeUDP-N-acetylglucosamine 2-epimerase6e-0755.5
NC_017507:43135:4789347893490051113Marinobacter adhaerens HP15 plasmid pHP-187, complete sequenceUDP-N-acetylglucosamine 2-epimerase8e-0755.1
NC_011894:2618951:2635399263539926365231125Methylobacterium nodulans ORS 2060, complete genomeUDP-N-acetylglucosamine 2-epimerase1e-0654.7
NC_016830:1901488:1911260191126019123841125Pseudomonas fluorescens F113 chromosome, complete genomeUDP-N-acetylglucosamine 2-epimerase1e-0654.7
NC_019896:536500:5573225573225584641143Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeUDP-N-acetylglucosamine 2-epimerase1e-0654.7
NC_014976:1671594:1672554167255416736961143Bacillus subtilis BSn5 chromosome, complete genomeUDP-N-acetylglucosamine 2-epimerase2e-0654.3
NC_000964:3658000:3663271366327136644131143Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein2e-0654.3
NC_017512:2161000:2171703217170321728211119Neisseria meningitidis WUE 2594, complete genomeUDP-N-acetylglucosamine 2-epimerase2e-0654.3
NC_009052:71058:7915679156802771122Shewanella baltica OS155, complete genomeUDP-N-acetylglucosamine 2-epimerase2e-0653.9
NC_013172:3093467:3139420313942031405861167Brachybacterium faecium DSM 4810, complete genomeUDP-N-Acetylglucosamine 2-epimerase3e-0653.5
NC_014315:3004125:3016501301650130177241224Nitrosococcus watsoni C-113 chromosome, complete genomeUDP-N-acetylglucosamine 2-epimerase3e-0653.5
NC_009659:2523874:2556720255672025578441125Janthinobacterium sp. Marseille chromosome, complete genomeUDP-N-acetylglucosamine 2-epimerase2e-0653.5
NC_018664:201487:2025692025692036931125Clostridium acidurici 9a chromosome, complete genomeUDP-N-acetylglucosamine 2-epimerase WecB2e-0653.5
NC_017095:119361:1204771204771216041128Fervidobacterium pennivorans DSM 9078 chromosome, complete genomeUDP-N-acetylglucosamine 2-epimerase3e-0653.1
NC_014355:2321957:2321957232195723230571101Candidatus Nitrospira defluvii, complete genomeUDP-N-acetylglucosamine 2-epimerase4e-0652.8
NC_007517:1676604:1703273170327317044211149Geobacter metallireducens GS-15, complete genomeUDP-N-acetylglucosamine 2-epimerase5e-0652.8
NC_019970:2551607:2557926255792625590831158Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeUDP-N-acetylglucosamine 2-epimerase5e-0652.4
NC_014958:3131191:3138844313884431399921149Deinococcus maricopensis DSM 21211 chromosome, complete genomeUDP-N-acetylglucosamine 2-epimerase9e-0651.6