Pre_GI Gene

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Host: NC_012582 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012582:997268 Vibrio cholerae O395 chromosome chromosome I, complete sequence

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae O395 is a classical O1 serotype strain of the Ogawa biotype. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
99726810003783111putative multidrug resistance proteinQuickGO ontologyBLASTP
10004331000543111hypothetical protein
10008051001305501phosphotyrosine protein phosphataseQuickGO ontologyBLASTP
100161810027361119UDP-N-acetylglucosamine 2-epimeraseQuickGO ontologyBLASTP
100275610039971242UDP-N-acetyl-D-mannosaminuronic acid dehydrogenaseQuickGO ontologyBLASTP
10039941004548555serine acetyltransferase-related proteinQuickGO ontologyBLASTP
100454510056931149putative exopolysaccharide biosynthesis proteinQuickGO ontologyBLASTP
100709210083121221hypothetical proteinBLASTP
10083231008754432serine acetyltransferase-related proteinQuickGO ontologyBLASTP
100875410100941341putative capK proteinQuickGO ontologyBLASTP
101007010111671098putative polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
101116410123361173hypothetical proteinBLASTP
10123261013078753UDP-N-acetyl-D-mannosamine transferaseQuickGO ontologyBLASTP
10132741014089816hypothetical proteinBLASTP
101429510155211227hypothetical proteinBLASTP
101578510186582874hemolysin-related proteinQuickGO ontologyBLASTP
101881310201291317hypothetical proteinBLASTP
10203051020910606hypothetical proteinBLASTP
102140010227971398putative capsular polysaccharide biosynthesis glycosyltransferaseQuickGO ontologyBLASTP