Pre_GI: BLASTP Hits

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Query: NC_005139:1784000:1787293 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 1787293, End: 1787874, Length: 582

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012491:4692667:471853247185324719200669Brevibacillus brevis NBRC 100599, complete genomehypothetical protein7e-1993.6
NC_016641:5926000:594116959411695941768600Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein8e-1373.6
NC_003143:2778494:278394127839412784486546Yersinia pestis CO92, complete genomehypothetical protein5e-0960.8
NC_005810:2549680:255356925535692554114546Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein5e-0960.8
NC_004088:1851500:188761518876151888160546Yersinia pestis KIM, complete genomehypothetical protein5e-0960.8
NC_020291:463500:468976468976469575600Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomehypothetical protein8e-0960.1
NC_008150:2207198:221565622156562216186531Yersinia pestis Antiqua, complete genomehypothetical protein2e-0858.9
NC_006155:2979500:297953329795332980063531Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein2e-0858.9
NC_008149:2337336:234579423457942346324531Yersinia pestis Nepal516, complete genomehypothetical protein2e-0858.9
NC_010465:1790739:180670318067031807233531Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein2e-0858.9
NC_010634:2894631:289746328974632897993531Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein2e-0858.9
NC_009708:1735903:177207617720761772606531Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-0858.9
NC_017265:1571305:160871116087111609241531Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein2e-0858.9
NC_017168:2941938:297796529779652978492528Yersinia pestis A1122 chromosome, complete genomehypothetical protein2e-0858.9
NC_017160:2787637:282517928251792825631453Yersinia pestis D182038 chromosome, complete genomehypothetical protein2e-0858.5
NC_017154:2774955:278341327834132783865453Yersinia pestis D106004 chromosome, complete genomehypothetical protein2e-0858.5
NC_014029:2729832:273626327362632736715453Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-0858.5
NC_010159:1794000:179797617979761798428453Yersinia pestis Angola, complete genomehypothetical protein2e-0858.5
NC_012491:4692667:469407246940724694701630Brevibacillus brevis NBRC 100599, complete genomehypothetical protein2e-0652.4