Pre_GI: BLASTP Hits

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Query: NC_005126:1223042:1241918 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 1241918, End: 1242235, Length: 318

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:1136000:113608111360811136401321Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative addiction module killer protein3e-39160
NC_005810:1130251:114785811478581148178321Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein3e-39160
NC_017168:4155143:415677041567704157087318Yersinia pestis A1122 chromosome, complete genomeprophage protein3e-39160
NC_009381:2939782:295738829573882957705318Yersinia pestis Pestoides F chromosome, complete genomeprophage protein3e-39160
NC_008150:650899:651490651490651807318Yersinia pestis Antiqua, complete genomeputative prophage protein3e-39160
NC_008149:3251196:326880332688033269120318Yersinia pestis Nepal516, complete genomeprophage protein3e-39160
NC_003143:1233128:123475212347521235063312Yersinia pestis CO92, complete genomeputative prophage protein3e-30130
NC_021150:3667176:367921836792183679553336Azotobacter vinelandii CA6, complete genomehypothetical protein3e-24110
NC_012560:3667177:367921936792193679554336Azotobacter vinelandii DJ, complete genomehypothetical protein3e-24110
NC_014910:242845:278244278244278573330Alicycliphilus denitrificans BC chromosome, complete genomeaddiction module killer protein2e-22104
NC_008782:3110744:312731231273123127662351Acidovorax sp. JS42, complete genomeprotein of unknown function DUF8912e-22104
NC_014365:2888897:289678328967832897121339Desulfarculus baarsii DSM 2075 chromosome, complete genomeaddiction module killer protein1e-21101
NC_012917:3378759:338578733857873386110324Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeaddiction module killer protein1e-1995.1
NC_004578:6089958:610763261076326107955324Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein1e-1478.2
NC_009655:1357486:136660113666011366918318Actinobacillus succinogenes 130Z chromosome, complete genomeaddiction module killer protein4e-1476.6
NC_014228:2270000:229130322913032291659357Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein1e-1375.5
NC_017033:1052000:107205810720581072372315Frateuria aurantia DSM 6220 chromosome, complete genomeputative addiction module killer protein1e-1271.6
NC_014973:54449:650356503565325291Geobacter sp. M18 chromosome, complete genomeaddiction module killer protein2e-1271.2
NC_013416:939668:942292942292942603312Aggregatibacter actinomycetemcomitans D11S-1, complete genomeaddiction module killer protein4e-1270.1
NC_014228:2883500:288453628845362884823288Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein7e-1269.3
NC_013959:2801557:281473728147372815060324Sideroxydans lithotrophicus ES-1 chromosome, complete genomeaddiction module killer protein1e-1168.9
NC_007517:2870657:287565328756532875943291Geobacter metallireducens GS-15, complete genomeprotein of unknown function DUF8911e-1168.6
NC_009337:715500:762264762264762569306Chlorobium phaeovibrioides DSM 265 chromosome, complete genomehypothetical protein1e-1168.2
NC_008740:2989856:299716629971662997465300Marinobacter aquaeolei VT8, complete genomeprotein of unknown function DUF8916e-1166.2
NC_008751:1736512:174567017456701745984315Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeprotein of unknown function DUF8911e-1065.1
NC_011365:592256:638299638299638598300Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeaddiction module killer protein3e-1063.9
NC_010943:325739:337553337553337840288Stenotrophomonas maltophilia K279a, complete genomeputative phage-related protein5e-1063.2
NC_019697:1879769:190086519008651901218354Chamaesiphon minutus PCC 6605, complete genomeputative addiction module killer protein8e-1062.4
NC_005230:32647:361893618936479291Synechocystis sp. PCC 6803 plasmid pSYSA, complete sequencehypothetical protein2e-0961.2
NC_012751:1988280:200321020032102003506297Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeaddiction module2e-0858.2
NC_009656:4527457:460252546025254602824300Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein2e-0857.8
NC_020829:5620826:562446156244615624763303Pseudomonas denitrificans ATCC 13867, complete genomeaddiction module killer protein4e-0856.6
NC_009925:1003000:101123410112341011518285Acaryochloris marina MBIC11017, complete genomeaddiction module toxin, putative9e-0855.8
NC_007275:1:415441544453300Pseudomonas syringae pv. phaseolicola 1448A small plasmid, completehypothetical protein1e-0651.6
NC_011146:3089297:310020831002083100504297Geobacter bemidjiensis Bem, complete genome1e-0548.9