Pre_GI: BLASTP Hits

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Query: NC_004631:1881214:1894130 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 1894130, End: 1894810, Length: 681

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:1078113:108600310860031086683681Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-119429
NC_011294:1048223:105339810533981054078681Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity island protein2e-117421
NC_011274:1057887:106268710626871063367681Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity island protein2e-117421
NC_011147:1802535:181728118172811817961681Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-117421
NC_006511:1808815:182209818220981822778681Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein2e-117421
NC_003197:1170746:117554811755481176228681Salmonella typhimurium LT2, complete genomepathogenicity island-encoded protein A3e-117420
NC_016810:1126693:113187011318701132550681Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein3e-117420
NC_016857:1126693:113187011318701132550681Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74pathogenicity island-encoded protein A3e-117420
NC_016863:1128381:113318311331831133863681Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1pathogenicity island-encoded protein A3e-117420
NC_012125:2687980:269904026990402699720681Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-116418
NC_010102:2020762:203181120318112032491681Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-116418
NC_011205:1147556:115404511540451154725681Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein1e-115415
NC_016832:1880174:189115718911571891660504Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein4e-83307
NC_017046:1127325:113212711321271132630504Salmonella enterica subsp. enterica serovar Typhimurium str. 798pathogenicity island-encoded protein A2e-81301
NC_016860:1168431:117323311732331173736504Salmonella enterica subsp. enterica serovar Typhimurium strpathogenicity island-encoded protein A2e-81301
NC_016856:1128715:113389211338921134395504Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Spathogenicity island-encoded protein A2e-81301
NC_011083:1173802:118027311802731180776504Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,pathogenicity island-encoded protein A2e-81301
NC_011080:1166951:117788411778841178387504Salmonella enterica subsp. enterica serovar Newport str. SL254,pathogenicity island-encoded protein A2e-81301
NC_016831:1950650:196188519618851962388504Salmonella enterica subsp. enterica serovar Gallinarum/pullorumpathogenicity island protein6e-81300
NC_011149:1035990:104510210451021045605504Salmonella enterica subsp. enterica serovar Agona str. SL483,pathogenicity island-encoded protein A5e-81300
NC_011294:1220526:123464412346441235330687Salmonella enterica subsp. enterica serovar Enteritidis strbacteriophage encoded virulence protein3e-72271
NC_017046:2756000:275753527575352758221687Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage encoded virulence protein4e-71267
NC_011205:1345511:137051413705141370987474Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein2e-53208
NC_016831:1734292:174263117426311743098468Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative bacteriophage encoded virulence protein5e-53207
NC_011094:1127983:113445111344511134732282Salmonella enterica subsp. enterica serovar Schwarzengrund str7e-48190